Constant Field Values
Contents
net.sf.*
-
net.sf.basedb.clients.jobagent.Agent Modifier and Type Constant Field Value public static final int
DEFAULT_CHECK_INTERVAL
30
-
net.sf.basedb.clients.web.Base Modifier and Type Constant Field Value public static final String
WEBCLIENT_ID
"net.sf.basedb.clients.web"
-
net.sf.basedb.clients.web.DuplicateWizardException Modifier and Type Constant Field Value private static final long
serialVersionUID
8663167575860015142L
-
net.sf.basedb.clients.web.ExperimentExplorer Modifier and Type Constant Field Value public static final int
SPOT_ALL
-1
public static final int
SPOT_AVG
-2
-
net.sf.basedb.clients.web.ModeInfo Modifier and Type Constant Field Value private static final boolean
HAS_CANCELBUTTON
true
private static final boolean
HAS_CHECK
true
private static final boolean
HAS_CLOSEBUTTON
true
private static final boolean
HAS_EDITLINK
true
private static final boolean
HAS_FILTER
true
private static final boolean
HAS_ICONS
true
private static final boolean
HAS_NAVIGATOR
true
private static final boolean
HAS_OKBUTTON
true
private static final boolean
HAS_PROPERTYLINK
true
private static final boolean
HAS_RADIO
true
private static final boolean
HAS_TOOLBAR
true
private static final boolean
IS_COMPACT
true
private static final boolean
NO_CANCELBUTTON
false
private static final boolean
NO_CHECK
false
private static final boolean
NO_CLOSEBUTTON
false
private static final boolean
NO_EDITLINK
false
private static final boolean
NO_FILTER
false
private static final boolean
NO_ICONS
false
private static final boolean
NO_NAVIGATOR
false
private static final boolean
NO_OKBUTTON
false
private static final boolean
NO_PROPERTYLINK
false
private static final boolean
NO_RADIO
false
private static final boolean
NO_TOOLBAR
false
private static final boolean
NOT_COMPACT
false
private static final boolean
NOT_SELECTION_MODE
false
private static final boolean
SELECTION_MODE
true
-
net.sf.basedb.clients.web.WebException Modifier and Type Constant Field Value private static final long
serialVersionUID
8401139016420733632L
-
net.sf.basedb.clients.web.extensions.ExtensionsControl Modifier and Type Constant Field Value public static final String
RESOURCES_URL
"/extensions"
public static final String
SERVLET_URL
"/extensions/servlet"
-
net.sf.basedb.clients.web.extensions.JspContext Modifier and Type Constant Field Value public static final String
ATTRIBUTE_KEY
"net.sf.basedb.clients.web.extensions.JspContext"
public static final String
EXTENSION_KEY
"net.sf.basedb.util.extensions.Extension"
-
net.sf.basedb.clients.web.extensions.ServletLoader Modifier and Type Constant Field Value private static final String
namespace
"http://base.thep.lu.se/servlets.xsd"
-
net.sf.basedb.clients.web.extensions.XJspCompiler Modifier and Type Constant Field Value public static final String
RESOURCES_URL
"/extensions"
-
net.sf.basedb.clients.web.extensions.list.RelatedItemExtensionColumn Modifier and Type Constant Field Value public static final String
SUBCONTEXT
"RelatedItemColumns"
-
net.sf.basedb.clients.web.extensions.list.net.sf.basedb.clients.web.extensions.list.RelatedItemHelper Modifier and Type Constant Field Value private static final int
MAX_ITEMS_IN_TRANSACTION
200
-
net.sf.basedb.clients.web.extensions.service.Services Modifier and Type Constant Field Value public static final String
EXTENSION_POINT_ID
"net.sf.basedb.clients.web.services"
-
net.sf.basedb.clients.web.extensions.toolbar.ToolbarUtil Modifier and Type Constant Field Value public static final int
ITEM
1
public static final int
LIST
0
-
net.sf.basedb.clients.web.fileupload.FileUpload Modifier and Type Constant Field Value public static final long
DEFAULT_TIMEOUT
60000L
private static final String
EMPTY_STRING
""
-
net.sf.basedb.clients.web.fileupload.UploadAbortedException Modifier and Type Constant Field Value private static final long
serialVersionUID
5207696297213600544L
-
net.sf.basedb.clients.web.formatter.FormatterSettings Modifier and Type Constant Field Value public static final String
DEFAULT_DATE_FORMAT
"yyyy-MM-dd"
public static final String
DEFAULT_DATETIME_FORMAT
"yyyy-MM-dd HH:mm:ss"
public static final int
DEFAULT_NUM_DECIMALS
2
-
net.sf.basedb.clients.web.plugins.SimpleExport Modifier and Type Constant Field Value private static final String
COLLECTION_SEPARATOR
"collectionSeparator"
private static final String
COLUMN_PREFIX
"columnPrefix"
private static final String
FORMAT
"format"
private static final String
SAME_UNITS
"sameUnits"
private static final String
WHICH_ITEMS
"whichItems"
private static final String
WHICH_PROPERTIES
"whichProperties"
-
net.sf.basedb.clients.web.servlet.CompileAll Modifier and Type Constant Field Value private static final long
serialVersionUID
5908370094706141413L
-
net.sf.basedb.clients.web.servlet.ContentSecurityPolicyReportServlet Modifier and Type Constant Field Value private static final int
MAX_REPORT_LENGTH
1024
private static final long
serialVersionUID
-2376469451362396339L
-
net.sf.basedb.clients.web.servlet.Download Modifier and Type Constant Field Value private static final long
serialVersionUID
6893272087926809158L
-
net.sf.basedb.clients.web.servlet.ExperimentExplorerPlotServlet Modifier and Type Constant Field Value private static final long
serialVersionUID
-445763412868957935L
-
net.sf.basedb.clients.web.servlet.ExtensionsServlet Modifier and Type Constant Field Value private static final long
serialVersionUID
338904698493055683L
-
net.sf.basedb.clients.web.servlet.PlotServlet Modifier and Type Constant Field Value private static final long
serialVersionUID
80128526417552573L
-
net.sf.basedb.clients.web.servlet.RssNewsFeed Modifier and Type Constant Field Value private static final long
serialVersionUID
-4097480516166797186L
-
net.sf.basedb.clients.web.servlet.StartStopServlet Modifier and Type Constant Field Value private static final long
serialVersionUID
8267932757094628788L
-
net.sf.basedb.clients.web.servlet.Upload Modifier and Type Constant Field Value private static final long
serialVersionUID
1404104707477507003L
-
net.sf.basedb.clients.web.taglib.Body Modifier and Type Constant Field Value private static final long
serialVersionUID
6814973550614834311L
-
net.sf.basedb.clients.web.taglib.Button Modifier and Type Constant Field Value private static final long
serialVersionUID
2058163945669701874L
-
net.sf.basedb.clients.web.taglib.ButtonGroup Modifier and Type Constant Field Value private static final long
serialVersionUID
-8808469470232672680L
-
net.sf.basedb.clients.web.taglib.CalendarButton Modifier and Type Constant Field Value private static final long
serialVersionUID
6346550752955859402L
-
net.sf.basedb.clients.web.taglib.ExceptionCatcher Modifier and Type Constant Field Value private static final long
serialVersionUID
-5694802936612085039L
-
net.sf.basedb.clients.web.taglib.Head Modifier and Type Constant Field Value private static final long
serialVersionUID
948719986796860767L
-
net.sf.basedb.clients.web.taglib.Help Modifier and Type Constant Field Value private static final long
serialVersionUID
-2754197259139443681L
-
net.sf.basedb.clients.web.taglib.HideableSection Modifier and Type Constant Field Value private static final long
serialVersionUID
4750788983708350436L
-
net.sf.basedb.clients.web.taglib.Icon Modifier and Type Constant Field Value private static final long
serialVersionUID
6886281373891822996L
-
net.sf.basedb.clients.web.taglib.Input Modifier and Type Constant Field Value private static final long
serialVersionUID
8306637459722729777L
-
net.sf.basedb.clients.web.taglib.Page Modifier and Type Constant Field Value static final int
PAGE_TYPE_DEFAULT
0
static final int
PAGE_TYPE_IFRAME
4
static final int
PAGE_TYPE_INCLUDE
3
static final int
PAGE_TYPE_POPUP
1
private static final long
serialVersionUID
-5693587214280114326L
-
net.sf.basedb.clients.web.taglib.PropertyValue Modifier and Type Constant Field Value private static final long
serialVersionUID
-92637960053523649L
-
net.sf.basedb.clients.web.taglib.Select Modifier and Type Constant Field Value private static final long
serialVersionUID
-9096279950931870965L
-
net.sf.basedb.clients.web.taglib.StylableTag Modifier and Type Constant Field Value private static final long
serialVersionUID
-383421425096524117L
-
net.sf.basedb.clients.web.taglib.Zoom Modifier and Type Constant Field Value private static final long
serialVersionUID
5226627932346514174L
-
net.sf.basedb.clients.web.taglib.extensions.Render Modifier and Type Constant Field Value private static final long
serialVersionUID
-788121059344311519L
-
net.sf.basedb.clients.web.taglib.extensions.Scripts Modifier and Type Constant Field Value private static final long
serialVersionUID
-2867817254135934000L
-
net.sf.basedb.clients.web.taglib.extensions.Stylesheets Modifier and Type Constant Field Value private static final long
serialVersionUID
-3549659176356969880L
-
net.sf.basedb.clients.web.taglib.menu.Menuitem Modifier and Type Constant Field Value private static final long
serialVersionUID
1431778959423572670L
-
net.sf.basedb.clients.web.taglib.menu.Menuseparator Modifier and Type Constant Field Value private static final long
serialVersionUID
-1758168104130104042L
-
net.sf.basedb.clients.web.taglib.menu.Submenu Modifier and Type Constant Field Value private static final long
serialVersionUID
-9170636903520137656L
-
net.sf.basedb.clients.web.taglib.path.Path Modifier and Type Constant Field Value private static final long
serialVersionUID
6315346458189900215L
-
net.sf.basedb.clients.web.taglib.path.PathElement Modifier and Type Constant Field Value private static final long
serialVersionUID
3580594490341605165L
-
net.sf.basedb.clients.web.taglib.tab.Tab Modifier and Type Constant Field Value private static final long
serialVersionUID
-2308568821797105775L
-
net.sf.basedb.clients.web.taglib.tab.TabControl Modifier and Type Constant Field Value public static final int
BOTTOM
2
private static final long
serialVersionUID
1898616270560551262L
public static final int
TOP
1
-
net.sf.basedb.clients.web.taglib.table.Button Modifier and Type Constant Field Value private static final long
serialVersionUID
-6294795199053088632L
-
net.sf.basedb.clients.web.taglib.table.Cell Modifier and Type Constant Field Value private static final long
serialVersionUID
-1992298892993613884L
-
net.sf.basedb.clients.web.taglib.table.CellValue Modifier and Type Constant Field Value private static final long
serialVersionUID
4068184541728474047L
-
net.sf.basedb.clients.web.taglib.table.ColumnDef Modifier and Type Constant Field Value private static final long
serialVersionUID
-272408513116029365L
-
net.sf.basedb.clients.web.taglib.table.ColumnHeaders Modifier and Type Constant Field Value private static final long
serialVersionUID
8228986623221072939L
-
net.sf.basedb.clients.web.taglib.table.ColumnSubtitles Modifier and Type Constant Field Value private static final long
serialVersionUID
-5577600038399464310L
-
net.sf.basedb.clients.web.taglib.table.Data Modifier and Type Constant Field Value private static final long
serialVersionUID
6633768910320305875L
-
net.sf.basedb.clients.web.taglib.table.ExtensionCells Modifier and Type Constant Field Value private static final long
serialVersionUID
-6033350639081278510L
-
net.sf.basedb.clients.web.taglib.table.Form Modifier and Type Constant Field Value private static final long
serialVersionUID
-6667213780186530313L
-
net.sf.basedb.clients.web.taglib.table.Header Modifier and Type Constant Field Value private static final long
serialVersionUID
-7541520513764712983L
-
net.sf.basedb.clients.web.taglib.table.HeaderRow Modifier and Type Constant Field Value private static final long
serialVersionUID
-6286111811069582940L
-
net.sf.basedb.clients.web.taglib.table.Headers Modifier and Type Constant Field Value private static final long
serialVersionUID
-2393116160899885910L
-
net.sf.basedb.clients.web.taglib.table.Hidden Modifier and Type Constant Field Value private static final long
serialVersionUID
-2708187720621346925L
-
net.sf.basedb.clients.web.taglib.table.Label Modifier and Type Constant Field Value private static final long
serialVersionUID
5326481772609709567L
-
net.sf.basedb.clients.web.taglib.table.Navigator Modifier and Type Constant Field Value private static final long
serialVersionUID
3287798191943288674L
-
net.sf.basedb.clients.web.taglib.table.Panel Modifier and Type Constant Field Value private static final long
serialVersionUID
8435173953529878997L
-
net.sf.basedb.clients.web.taglib.table.PresetSelector Modifier and Type Constant Field Value private static final long
serialVersionUID
6787200020881710014L
-
net.sf.basedb.clients.web.taglib.table.PropertyFilter Modifier and Type Constant Field Value private static final long
serialVersionUID
-1007580995461268459L
-
net.sf.basedb.clients.web.taglib.table.Row Modifier and Type Constant Field Value private static final long
serialVersionUID
1975591924471893645L
-
net.sf.basedb.clients.web.taglib.table.Rows Modifier and Type Constant Field Value private static final long
serialVersionUID
-2059234250363605715L
-
net.sf.basedb.clients.web.taglib.table.Table Modifier and Type Constant Field Value private static final long
serialVersionUID
-6717117667917148241L
-
net.sf.basedb.clients.web.taglib.table.Toolbar Modifier and Type Constant Field Value private static final long
serialVersionUID
-8719987407920036604L
-
net.sf.basedb.clients.web.util.HTML Modifier and Type Constant Field Value public static final int
LINK_EMAIL
2
public static final int
LINK_URL
1
public static final int
SMART_IMAGES
4
-
net.sf.basedb.core.AccountExpiredException Modifier and Type Constant Field Value private static final long
serialVersionUID
3521477904486961158L
-
net.sf.basedb.core.AlreadyLoggedInException Modifier and Type Constant Field Value private static final long
serialVersionUID
3492139536509366378L
-
net.sf.basedb.core.AnnotationType Modifier and Type Constant Field Value public static final int
MAX_DEFAULT_VALUE_LENGTH
255
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_OPTION_LENGTH
255
-
net.sf.basedb.core.ArraySlide Modifier and Type Constant Field Value public static final int
MAX_BARCODE_LENGTH
255
-
net.sf.basedb.core.BaseException Modifier and Type Constant Field Value private static final long
serialVersionUID
-3336541323718932298L
-
net.sf.basedb.core.BioMaterial Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.BioMaterialEvent Modifier and Type Constant Field Value public static final int
MAX_COMMENT_LENGTH
65535
-
net.sf.basedb.core.BioPlate Modifier and Type Constant Field Value public static final int
MAX_BARCODE_LENGTH
255
public static final int
MAX_POSITION_LENGTH
255
public static final int
MAX_SECTION_LENGTH
255
public static final int
MAX_TRAY_LENGTH
255
-
net.sf.basedb.core.BioPlateEventParticipant Modifier and Type Constant Field Value public static final int
MAX_ROLE_LENGTH
255
-
net.sf.basedb.core.BioPlateEventType Modifier and Type Constant Field Value public static final String
CREATE_BIOMATERIAL
"net.sf.basedb.core.BioPlateEventType.CREATE_BIOMATERIAL"
public static final String
GENERIC
"net.sf.basedb.core.BioPlateEventType.GENERIC"
public static final String
MOVE
"net.sf.basedb.core.BioPlateEventType.MOVE"
public static final String
PHYSICAL_BIOASSAY
"net.sf.basedb.core.BioPlateEventType.PHYSICAL_BIOASSAY"
public static final String
PLACE_ON_PLATE
"net.sf.basedb.core.BioPlateEventType.PLACE_ON_PLACE"
-
net.sf.basedb.core.Client Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.ClonableProperty Modifier and Type Constant Field Value private static final boolean
MANDATORY
true
private static final boolean
NULLABLE
true
-
net.sf.basedb.core.ConfigurationException Modifier and Type Constant Field Value private static final long
serialVersionUID
-4529759727198656159L
-
net.sf.basedb.core.ConnectionClosedException Modifier and Type Constant Field Value private static final long
serialVersionUID
-724179591893028717L
-
net.sf.basedb.core.DatabaseException Modifier and Type Constant Field Value private static final long
serialVersionUID
-8341857688856615743L
-
net.sf.basedb.core.DataFileType Modifier and Type Constant Field Value public static final String
AFFYMETRIX_CDF
"affymetrix.cdf"
public static final String
AFFYMETRIX_CEL
"affymetrix.cel"
public static final String
BAM
"assembly.bam"
public static final String
BASEFILE_MATRIX
"basefile.matrix"
public static final String
BASEFILE_SERIAL
"basefile.serial"
public static final String
BFS_METADATA
"bfs.metadata"
public static final String
FPKM_TRACKING
"sequencing.fpkm_tracking"
public static final String
GENERIC_EXTRAVALUE_DATA
"generic.extravaluedata"
public static final String
GENERIC_PRINT_MAP
"generic.printmap"
public static final String
GENERIC_RAW_DATA
"generic.rawdata"
public static final String
GENERIC_REPORTER_MAP
"generic.reportermap"
public static final String
GENERIC_SPOT_DATA
"generic.spotdata"
public static final int
MAX_EXTENSION_LENGTH
255
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final String
MEV_TDMS
"mev.tdms"
public static final String
MICROARRAY_IMAGE
"microarray.image"
public static final String
REF_SEQ_GTF
"refseq.gtf"
public static final String
SAM
"assembly.sam"
-
net.sf.basedb.core.DateFormatException Modifier and Type Constant Field Value private static final long
serialVersionUID
-4312755232208681515L
-
net.sf.basedb.core.DerivedBioAssay Modifier and Type Constant Field Value public static final String
ARRANGEMENT
"net.sf.basedb.core.DerivedBioAssayType.ARRANGEMENT"
public static final String
SCAN
"net.sf.basedb.core.DerivedBioAssayType.SCAN"
public static final String
SEQUENCES
"net.sf.basedb.core.DerivedBioAssayType.SEQUENCES"
-
net.sf.basedb.core.DetachedItemException Modifier and Type Constant Field Value private static final long
serialVersionUID
4694041774316355349L
-
net.sf.basedb.core.DeviceNotVerifiedException Modifier and Type Constant Field Value private static final long
serialVersionUID
-6864074877391853773L
-
net.sf.basedb.core.DisallowedValueException Modifier and Type Constant Field Value private static final long
serialVersionUID
1332642295480924999L
-
net.sf.basedb.core.Experiment Modifier and Type Constant Field Value public static final int
MAX_ABSTRACT_LENGTH
65535
public static final int
MAX_AFFILIATIONS_LENGTH
65535
public static final int
MAX_AUTHORS_LENGTH
65535
public static final int
MAX_EXPERIMENT_DESIGN_LENGTH
65535
public static final int
MAX_EXPERIMENT_TYPE_LENGTH
65535
public static final int
MAX_PUBLICATION_LENGTH
65535
public static final int
MAX_PUBMEDID_LENGTH
255
public static final int
MAX_TITLE_LENGTH
65535
-
net.sf.basedb.core.net.sf.basedb.core.ExtendedPropertyAccessor.GetterSetter Modifier and Type Constant Field Value private static final long
serialVersionUID
2904387621348099703L
-
net.sf.basedb.core.ExtraValueType Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.File Modifier and Type Constant Field Value public static final String
ALIGNED_SEQUENCE
"net.sf.basedb.core.FileType.ALIGNED_SEQUENCE"
public static final String
EXTRAVALUE_DATA
"net.sf.basedb.core.FileType.EXTRAVALUE_DATA"
public static final String
IMAGE
"net.sf.basedb.core.FileType.IMAGE"
public static final int
MAX_CHARSET_LENGTH
255
public static final int
MAX_MIMETYPE_LENGTH
255
public static final int
MAX_URL_LENGTH
2000
public static final String
PLATE
"net.sf.basedb.core.FileType.PLATE"
public static final String
PLATE_MAPPING
"net.sf.basedb.core.FileType.PLATE_MAPPING"
public static final String
PRINT_MAP
"net.sf.basedb.core.FileType.PRINT_MAP"
public static final String
PROTOCOL
"net.sf.basedb.core.FileType.PROTOCOL"
public static final String
RAW_DATA
"net.sf.basedb.core.FileType.RAW_DATA"
public static final String
REPORTER
"net.sf.basedb.core.FileType.REPORTER"
public static final String
REPORTER_MAP
"net.sf.basedb.core.FileType.REPORTER_MAP"
public static final String
SPOT_DATA
"net.sf.basedb.core.FileType.SPOT_DATA"
-
net.sf.basedb.core.FileServer Modifier and Type Constant Field Value public static final int
FINGERPRINT_LENGTH
47
public static final String
FINGERPRINT_TYPE_MD5
"MD5"
public static final String
FINGERPRINT_TYPE_SHA256
"SHA256"
public static final int
MAX_CERTIFICATE_LENGTH
65535
public static final int
MAX_CONNECTION_MANAGER_FACTORY_LENGTH
255
public static final int
MAX_FORMAT_LENGTH
255
public static final int
MAX_HOST_LENGTH
255
public static final int
MAX_PASSWORD_LENGTH
255
public static final int
MAX_PRIVATE_KEY_LENGTH
65535
public static final int
MAX_ROOT_PATH_LENGTH
255
public static final int
MAX_USERNAME_LENGTH
255
-
net.sf.basedb.core.Formula Modifier and Type Constant Field Value public static final int
MAX_FORMULA_LENGTH
255
-
net.sf.basedb.core.Hardware Modifier and Type Constant Field Value public static final String
CABINET
"net.sf.basedb.core.HardwareType.CABINET"
public static final String
CLUSTER_GENERATOR
"net.sf.basedb.core.HardwareType.CLUSTER_GENERATOR"
public static final String
FREEZER
"net.sf.basedb.core.HardwareType.FREEZER"
public static final String
HYBRIDIZATION_STATION
"net.sf.basedb.core.HardwareType.HYBRIDIZATION_STATION"
public static final int
MAX_VERSIONSTRING_LENGTH
255
public static final String
OTHER
"net.sf.basedb.core.HardwareType.OTHER"
public static final String
PRINT_ROBOT
"net.sf.basedb.core.HardwareType.PRINT_ROBOT"
public static final String
SCANNER
"net.sf.basedb.core.HardwareType.SCANNER"
public static final String
SEQUENCER
"net.sf.basedb.core.HardwareType.SEQUENCER"
-
net.sf.basedb.core.Help Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.InvalidAnnotationException Modifier and Type Constant Field Value private static final long
serialVersionUID
-3711446965517938282L
-
net.sf.basedb.core.InvalidDataException Modifier and Type Constant Field Value private static final long
serialVersionUID
-7183580873652712069L
-
net.sf.basedb.core.InvalidPasswordException Modifier and Type Constant Field Value private static final long
serialVersionUID
-7696617448870042174L
-
net.sf.basedb.core.InvalidPathException Modifier and Type Constant Field Value private static final long
serialVersionUID
7033749590246898005L
-
net.sf.basedb.core.InvalidRelationException Modifier and Type Constant Field Value private static final long
serialVersionUID
-7837408790194110261L
-
net.sf.basedb.core.InvalidUseOfNullException Modifier and Type Constant Field Value private static final long
serialVersionUID
-5438951825783349420L
-
net.sf.basedb.core.ItemAlreadyExistsException Modifier and Type Constant Field Value private static final long
serialVersionUID
8355317881537705674L
-
net.sf.basedb.core.ItemContext Modifier and Type Constant Field Value public static final String
DEFAULT_NAME
"- default -"
-
net.sf.basedb.core.ItemInUseException Modifier and Type Constant Field Value private static final long
serialVersionUID
8687133796504091488L
-
net.sf.basedb.core.ItemList Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.ItemModifiedException Modifier and Type Constant Field Value private static final long
serialVersionUID
6443430913361934576L
-
net.sf.basedb.core.ItemNotFoundException Modifier and Type Constant Field Value private static final long
serialVersionUID
-4554252030783275058L
-
net.sf.basedb.core.Job Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_SERVER_LENGTH
255
public static final int
MAX_STACK_TRACE_LENGTH
65535
public static final int
MAX_STATUS_MESSAGE_LENGTH
65535
-
net.sf.basedb.core.net.sf.basedb.core.Job.ProgressReporterImpl Modifier and Type Constant Field Value private static final long
UPDATE_INTERVAL
2000L
private static final int
UPDATE_PERCENT
1
-
net.sf.basedb.core.JobAgent Modifier and Type Constant Field Value public static final int
DEFAULT_PORT
47822
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_SERVER_LENGTH
255
-
net.sf.basedb.core.Kit Modifier and Type Constant Field Value public static final String
CLUSTER_GENERATION
"net.sf.basedb.core.KitType.CLUSTER_GENERATION"
public static final String
EXTRACTION
"net.sf.basedb.core.KitType.EXTRACTION"
public static final String
HYBRIDIZATION
"net.sf.basedb.core.KitType.HYBRIDIZATION"
public static final String
LABELING
"net.sf.basedb.core.KitType.LABELING"
public static final String
LIBRARY_PREPARATION
"net.sf.basedb.core.KitType.LIBRARY_PREPARATION"
public static final String
SAMPLING
"net.sf.basedb.core.KitType.SAMPLING"
public static final String
SEQUENCING
"net.sf.basedb.core.KitType.SEQUENCING"
-
net.sf.basedb.core.LoginException Modifier and Type Constant Field Value private static final long
serialVersionUID
5297093253941244696L
-
net.sf.basedb.core.Message Modifier and Type Constant Field Value public static final int
MAX_FROM_LENGTH
255
-
net.sf.basedb.core.MimeType Modifier and Type Constant Field Value public static final int
MAX_EXTENSION_LENGTH
255
-
net.sf.basedb.core.Nameable Modifier and Type Constant Field Value public static final int
MAX_DESCRIPTION_LENGTH
65535
public static final int
MAX_NAME_LENGTH
255
-
net.sf.basedb.core.NotLoggedInException Modifier and Type Constant Field Value private static final long
serialVersionUID
5892928408034076760L
-
net.sf.basedb.core.NumberOutOfRangeException Modifier and Type Constant Field Value private static final long
serialVersionUID
5912381046544116726L
-
net.sf.basedb.core.ParameterException Modifier and Type Constant Field Value private static final long
serialVersionUID
5726803477665248712L
-
net.sf.basedb.core.Path Modifier and Type Constant Field Value public static final String
INVALID_CHARACTERS
"~\\/:;*?<>|\""
-
net.sf.basedb.core.PermissionDeniedException Modifier and Type Constant Field Value private static final long
serialVersionUID
736019555576108955L
-
net.sf.basedb.core.PhysicalBioAssay Modifier and Type Constant Field Value public static final String
CLONAL_AMPLIFICATION
"net.sf.basedb.core.PhysicalBioAssayType.CLONAL_AMPLIFICATION"
public static final String
HYBRIDIZATION
"net.sf.basedb.core.PhysicalBioAssayType.HYBRIDIZATION"
-
net.sf.basedb.core.Plate Modifier and Type Constant Field Value public static final int
MAX_BARCODE_LENGTH
255
-
net.sf.basedb.core.PlateEvent Modifier and Type Constant Field Value public static final int
MAX_COMMENT_LENGTH
65535
-
net.sf.basedb.core.PlateMapping Modifier and Type Constant Field Value public static final int
MAX_IMAGE_LENGTH
255
-
net.sf.basedb.core.Platform Modifier and Type Constant Field Value public static final String
AFFYMETRIX
"affymetrix"
public static final String
GENERIC
"generic"
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final String
SEQUENCING
"sequencing"
-
net.sf.basedb.core.PlatformVariant Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final String
SEQUENCING_EXPRESSION
"sequencing.expression"
-
net.sf.basedb.core.PluginDefinition Modifier and Type Constant Field Value public static final int
MAX_CLASSNAME_LENGTH
255
public static final int
MAX_CONTACT_LENGTH
255
public static final int
MAX_COPYRIGHT_LENGTH
255
public static final int
MAX_EMAIL_LENGTH
255
public static final int
MAX_JARFILE_LENGTH
255
public static final int
MAX_NAME_LENGTH
255
public static final int
MAX_URL_LENGTH
255
public static final int
MAX_VERSION_LENGTH
255
-
net.sf.basedb.core.PluginType Modifier and Type Constant Field Value public static final int
MAX_INTERFACENAME_LENGTH
255
public static final int
MAX_JARFILE_LENGTH
255
-
net.sf.basedb.core.PredefinedQuery Modifier and Type Constant Field Value private static final String
commonQueryFile
"/common-queries.xml"
-
net.sf.basedb.core.PropertyFilter Modifier and Type Constant Field Value public static final int
MAX_VALUE_LENGTH
65535
public static final boolean
TEMPORARY
true
private static final String
value_separator
"|"
-
net.sf.basedb.core.Protocol Modifier and Type Constant Field Value public static final String
ALIGNMENT
"net.sf.basedb.core.ProtocolType.ALIGNMENT"
public static final String
CLUSTER_GENERATION
"net.sf.basedb.core.ProtocolType.CLUSTER_GENERATION"
public static final String
EXTRACTION
"net.sf.basedb.core.ProtocolType.EXTRACTION"
public static final String
FEATURE_EXTRACTION
"net.sf.basedb.core.ProtocolType.FEATURE_EXTRACTION"
public static final String
HYBRIDIZATION
"net.sf.basedb.core.ProtocolType.HYBRIDIZATION"
public static final String
LABELING
"net.sf.basedb.core.ProtocolType.LABELING"
public static final String
LIBRARY_PREPARATION
"net.sf.basedb.core.ProtocolType.LIBRARY_PREPARATION"
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final String
POOLING
"net.sf.basedb.core.ProtocolType.POOLING"
public static final String
PRINTING
"net.sf.basedb.core.ProtocolType.PRINTING"
public static final String
SAMPLING
"net.sf.basedb.core.ProtocolType.SAMPLING"
public static final String
SCANNING
"net.sf.basedb.core.ProtocolType.SCANNING"
public static final String
SEQUENCING
"net.sf.basedb.core.ProtocolType.SEQUENCING"
-
net.sf.basedb.core.Quantity Modifier and Type Constant Field Value public static final String
ABSORBED_DOSE
"net.sf.basedb.core.Quantity.ABSORBED_DOSE"
public static final String
ACCELERATION
"net.sf.basedb.core.Quantity.ACCELERATION"
public static final String
ANGLE
"net.sf.basedb.core.Quantity.ANGLE"
public static final String
AREA
"net.sf.basedb.core.Quantity.AREA"
public static final String
CAPACITANCE
"net.sf.basedb.core.Quantity.CAPACITANCE"
public static final String
CHARGE
"net.sf.basedb.core.Quantity.CHARGE"
public static final String
CURRENT
"net.sf.basedb.core.Quantity.CURRENT"
public static final String
DENSITY
"net.sf.basedb.core.Quantity.DENSITY"
public static final String
ENERGY
"net.sf.basedb.core.Quantity.ENERGY"
public static final String
EQUIVALENT_DOSE
"net.sf.basedb.core.Quantity.EQUIVALENT_DOSE"
public static final String
FLOW_RATE
"net.sf.basedb.core.Quantity.FLOW_RATE"
public static final String
FORCE
"net.sf.basedb.core.Quantity.FORCE"
public static final String
FRACTION
"net.sf.basedb.core.Quantity.FRACTION"
public static final String
FREQUENCY
"net.sf.basedb.core.Quantity.FREQUENCY"
public static final String
LENGTH
"net.sf.basedb.core.Quantity.LENGTH"
public static final String
MAGNETIC_FIELD
"net.sf.basedb.core.Quantity.MAGNETIC_FIELD"
public static final String
MAGNETIC_FLUX
"net.sf.basedb.core.Quantity.MAGNETIC_FLUX"
public static final String
MASS
"net.sf.basedb.core.Quantity.MASS"
public static final int
MAX_REFERENCE_UNIT_LENGTH
255
public static final String
MOLAR_CONCENTRATION
"net.sf.basedb.core.Quantity.MOLAR_CONCENTRATION"
public static final String
MOMENTUM
"net.sf.basedb.core.Quantity.MOMENTUM"
public static final String
POTENTIAL
"net.sf.basedb.core.Quantity.POTENTIAL"
public static final String
POWER
"net.sf.basedb.core.Quantity.POWER"
public static final String
PRESSURE
"net.sf.basedb.core.Quantity.PRESSURE"
public static final String
RADIOACTIVITY
"net.sf.basedb.core.Quantity.RADIOACTIVITY"
public static final String
RESISTANCE
"net.sf.basedb.core.Quantity.RESISTANCE"
public static final String
STORAGE_SIZE
"net.sf.basedb.core.Quantity.STORAGE_SIZE"
public static final String
SUBSTANCE
"net.sf.basedb.core.Quantity.SUBSTANCE"
public static final String
TEMPERATURE
"net.sf.basedb.core.Quantity.TEMPERATURE"
public static final String
THERMAL_CONDUCTIVITY
"net.sf.basedb.core.Quantity.THERMAL_CONDUCTIVITY"
public static final String
TIME
"net.sf.basedb.core.Quantity.TIME"
public static final String
TORGUE
"net.sf.basedb.core.Quantity.TORQUE"
public static final String
VELOCITY
"net.sf.basedb.core.Quantity.VELOCITY"
public static final String
VOLUME
"net.sf.basedb.core.Quantity.VOLUME"
-
net.sf.basedb.core.QuotaException Modifier and Type Constant Field Value private static final long
serialVersionUID
4279045703338054258L
-
net.sf.basedb.core.QuotaType Modifier and Type Constant Field Value public static final String
EXPERIMENT
"net.sf.basedb.core.QuotaType.EXPERIMENT"
public static final String
FILE
"net.sf.basedb.core.QuotaType.FILE"
public static final String
RAW_DATA
"net.sf.basedb.core.QuotaType.RAWDATA"
public static final String
TOTAL
"net.sf.basedb.core.QuotaType.TOTAL"
-
net.sf.basedb.core.RawBioAssay Modifier and Type Constant Field Value public static final int
MAX_HEADER_NAME_LENGTH
255
public static final int
MAX_HEADER_VALUE_LENGTH
65535
-
net.sf.basedb.core.ReporterList Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.Role Modifier and Type Constant Field Value public static final String
ADMINISTRATOR
"net.sf.basedb.core.Role.ADMINISTRATOR"
public static final String
GUEST
"net.sf.basedb.core.Role.GUEST"
public static final String
JOBAGENT
"net.sf.basedb.core.Role.JOBAGENT"
public static final String
POWER_USER
"net.sf.basedb.core.Role.POWER_USER"
public static final String
SUPERVISOR
"net.sf.basedb.core.Role.SUPERVISOR"
public static final String
USER
"net.sf.basedb.core.Role.USER"
-
net.sf.basedb.core.Setting Modifier and Type Constant Field Value public static final int
MAX_NAME_LENGTH
255
public static final int
MAX_VALUE_LENGTH
65535
-
net.sf.basedb.core.Software Modifier and Type Constant Field Value public static final String
ALIGNMENT
"net.sf.basedb.core.SoftwareType.ALIGNMENT"
public static final String
FEATURE_EXTRACTION
"net.sf.basedb.core.SoftwareType.FEATURE_EXTRACTION"
public static final int
MAX_VERSIONSTRING_LENGTH
255
-
net.sf.basedb.core.StringTooLongException Modifier and Type Constant Field Value private static final long
serialVersionUID
241736463987555060L
-
net.sf.basedb.core.SystemItem Modifier and Type Constant Field Value public static final int
MAX_SYSTEM_ID_LENGTH
255
-
net.sf.basedb.core.Unit Modifier and Type Constant Field Value public static final int
MAX_SYMBOL_LENGTH
255
-
net.sf.basedb.core.UnmodifiableResultList<T> Modifier and Type Constant Field Value private static final long
serialVersionUID
-1514212917126590560L
-
net.sf.basedb.core.UnsavedItemException Modifier and Type Constant Field Value private static final long
serialVersionUID
9092496684529135233L
-
net.sf.basedb.core.UnsupportedFileFormatException Modifier and Type Constant Field Value private static final long
serialVersionUID
-6974393471798478411L
-
net.sf.basedb.core.User Modifier and Type Constant Field Value public static final int
MAX_ADDRESS_LENGTH
255
public static final int
MAX_EMAIL_LENGTH
255
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_FAX_LENGTH
255
public static final int
MAX_LOGIN_LENGTH
255
public static final int
MAX_ORGANISATION_LENGTH
255
public static final int
MAX_PHONE_LENGTH
255
public static final int
MAX_URL_LENGTH
255
public static final String
ROOT
"net.sf.basedb.core.User.ROOT"
-
net.sf.basedb.core.VirtualColumn Modifier and Type Constant Field Value public static final boolean
INDEXED
true
public static final boolean
NULLABLE
true
public static final boolean
PRIMARY_KEY
true
public static final boolean
UNIQUE
true
-
net.sf.basedb.core.authentication.AuthenticationException Modifier and Type Constant Field Value private static final long
serialVersionUID
4258462779202665788L
-
net.sf.basedb.core.authentication.InvalidPasswordException Modifier and Type Constant Field Value private static final long
serialVersionUID
6007471910116426466L
-
net.sf.basedb.core.authentication.LoginException Modifier and Type Constant Field Value private static final long
serialVersionUID
1460132978417990852L
-
net.sf.basedb.core.authentication.UnknownLoginException Modifier and Type Constant Field Value private static final long
serialVersionUID
2869436058103572464L
-
net.sf.basedb.core.data.AnnotationSetData Modifier and Type Constant Field Value private static final long
serialVersionUID
7582258239220452911L
-
net.sf.basedb.core.data.AnnotationTypeData Modifier and Type Constant Field Value public static final int
MAX_DEFAULT_VALUE_LENGTH
255
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_OPTION_LENGTH
255
-
net.sf.basedb.core.data.ArraySlideData Modifier and Type Constant Field Value public static final int
MAX_BARCODE_LENGTH
255
-
net.sf.basedb.core.data.BioMaterialData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.BioMaterialEventData Modifier and Type Constant Field Value public static final int
MAX_COMMENT_LENGTH
65535
-
net.sf.basedb.core.data.BioPlateData Modifier and Type Constant Field Value public static final int
MAX_BARCODE_LENGTH
255
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_POSITION_LENGTH
255
public static final int
MAX_SECTION_LENGTH
255
public static final int
MAX_TRAY_LENGTH
255
-
net.sf.basedb.core.data.BioPlateEventParticipantData Modifier and Type Constant Field Value public static final int
MAX_ROLE_LENGTH
255
-
net.sf.basedb.core.data.ChangeHistoryDetailData Modifier and Type Constant Field Value public static final int
MAX_CHANGE_INFO_LENGTH
65535
public static final int
MAX_NEW_VALUE_LENGTH
65535
public static final int
MAX_OLD_VALUE_LENGTH
65535
-
net.sf.basedb.core.data.ClientData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.ContextData Modifier and Type Constant Field Value public static final int
MAX_NAME_LENGTH
255
public static final int
MAX_SORTPROPERTY_LENGTH
255
public static final int
MAX_SUBCONTEXT_LENGTH
255
-
net.sf.basedb.core.data.ContextIndex Modifier and Type Constant Field Value private static final long
serialVersionUID
-30654936444512825L
-
net.sf.basedb.core.data.DataFileTypeData Modifier and Type Constant Field Value public static final int
MAX_EXTENSION_LENGTH
255
public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.ExperimentData Modifier and Type Constant Field Value public static final int
MAX_ABSTRACT_LENGTH
65535
public static final int
MAX_AFFILIATIONS_LENGTH
65535
public static final int
MAX_AUTHORS_LENGTH
65535
public static final int
MAX_EXPERIMENT_DESIGN_LENGTH
65535
public static final int
MAX_EXPERIMENT_TYPE_LENGTH
65535
public static final int
MAX_PUBLICATION_LENGTH
65535
public static final int
MAX_PUBMEDID_LENGTH
255
public static final int
MAX_TITLE_LENGTH
65535
-
net.sf.basedb.core.data.ExtraValueTypeData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.FeatureData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.FileData Modifier and Type Constant Field Value public static final int
MAX_CHARSET_LENGTH
255
public static final int
MAX_MIMETYPE_LENGTH
255
public static final int
MAX_URL_LENGTH
2000
-
net.sf.basedb.core.data.FileServerData Modifier and Type Constant Field Value public static final int
FINGERPRINT_LENGTH
47
public static final int
MAX_CERTIFICATE_LENGTH
65535
public static final int
MAX_CONNECTION_MANAGER_FACTORY_LENGTH
255
public static final int
MAX_FORMAT_LENGTH
255
public static final int
MAX_HOST_LENGTH
255
public static final int
MAX_PASSWORD_LENGTH
255
public static final int
MAX_PRIVATE_KEY_LENGTH
65535
public static final int
MAX_ROOT_PATH_LENGTH
255
public static final int
MAX_USERNAME_LENGTH
255
-
net.sf.basedb.core.data.FileTypeIndex Modifier and Type Constant Field Value private static final long
serialVersionUID
5213031457561980770L
-
net.sf.basedb.core.data.FormulaData Modifier and Type Constant Field Value public static final int
MAX_FORMULA_LENGTH
255
public static final int
MAX_RAWDATATYPE_LENGTH
255
-
net.sf.basedb.core.data.GuiContextData Modifier and Type Constant Field Value private static final long
serialVersionUID
8098514351740554692L
-
net.sf.basedb.core.data.HardwareData Modifier and Type Constant Field Value public static final int
MAX_VERSIONSTRING_LENGTH
255
-
net.sf.basedb.core.data.HelpData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.ItemListData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.JobAgentData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_SERVER_LENGTH
255
-
net.sf.basedb.core.data.JobData Modifier and Type Constant Field Value public static final int
MAX_COMMAND_LENGTH
255
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_PLUGIN_VERSION_LENGTH
255
public static final int
MAX_SERVER_LENGTH
255
public static final int
MAX_SIGNAL_TRANSPORTER_LENGTH
655536
public static final int
MAX_STACK_TRACE_LENGTH
65535
public static final int
MAX_STATUS_MESSAGE_LENGTH
65535
public static final int
MAX_SUBCONTEXT_LENGTH
255
-
net.sf.basedb.core.data.MappingCoordinate Modifier and Type Constant Field Value private static final long
serialVersionUID
-142540401347259827L
-
net.sf.basedb.core.data.MessageData Modifier and Type Constant Field Value public static final int
MAX_FROM_LENGTH
255
-
net.sf.basedb.core.data.MimeTypeData Modifier and Type Constant Field Value public static final int
MAX_EXTENSION_LENGTH
255
-
net.sf.basedb.core.data.NameableData Modifier and Type Constant Field Value public static final int
MAX_DESCRIPTION_LENGTH
65535
public static final int
MAX_NAME_LENGTH
255
-
net.sf.basedb.core.data.ParameterValueData<T> Modifier and Type Constant Field Value public static final int
MAX_DESCRIPTION_LENGTH
65535
public static final int
MAX_LABEL_LENGTH
255
-
net.sf.basedb.core.data.PlateCoordinate Modifier and Type Constant Field Value private static final long
serialVersionUID
-7499789811217707905L
-
net.sf.basedb.core.data.PlateData Modifier and Type Constant Field Value public static final int
MAX_BARCODE_LENGTH
255
-
net.sf.basedb.core.data.PlateEventData Modifier and Type Constant Field Value public static final int
MAX_COMMENT_LENGTH
65535
-
net.sf.basedb.core.data.PlateMappingData Modifier and Type Constant Field Value public static final int
MAX_IMAGE_LENGTH
255
-
net.sf.basedb.core.data.PlatformData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.PlatformVariantData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.PluginDefinitionData Modifier and Type Constant Field Value public static final int
MAX_CLASSNAME_LENGTH
255
public static final int
MAX_CONTACT_LENGTH
255
public static final int
MAX_COPYRIGHT_LENGTH
255
public static final int
MAX_DESCRIPTION_LENGTH
65535
public static final int
MAX_EMAIL_LENGTH
255
public static final int
MAX_JARFILE_LENGTH
255
public static final int
MAX_NAME_LENGTH
255
public static final int
MAX_URL_LENGTH
255
public static final int
MAX_VERSION_LENGTH
255
-
net.sf.basedb.core.data.PluginTypeData Modifier and Type Constant Field Value public static final int
MAX_INTERFACENAME_LENGTH
255
public static final int
MAX_JARFILE_LENGTH
255
-
net.sf.basedb.core.data.PropertyFilterData Modifier and Type Constant Field Value public static final int
MAX_VALUE_LENGTH
65535
-
net.sf.basedb.core.data.ProtocolData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.QuantityData Modifier and Type Constant Field Value public static final int
MAX_REFERENCE_UNIT_LENGTH
255
-
net.sf.basedb.core.data.QuotaIndex Modifier and Type Constant Field Value private static final long
serialVersionUID
4679331005994321116L
-
net.sf.basedb.core.data.RawBioAssayData Modifier and Type Constant Field Value public static final int
MAX_HEADER_NAME_LENGTH
255
public static final int
MAX_HEADER_VALUE_LENGTH
65535
-
net.sf.basedb.core.data.ReporterClonePropertyData Modifier and Type Constant Field Value public static final int
MAX_COLUMN_LENGTH
255
-
net.sf.basedb.core.data.ReporterData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_LAST_SOURCE_LENGTH
255
public static final int
MAX_SYMBOL_LENGTH
255
-
net.sf.basedb.core.data.ReporterListData Modifier and Type Constant Field Value public static final int
MAX_EXTERNAL_ID_LENGTH
255
-
net.sf.basedb.core.data.ReporterListScoreData Modifier and Type Constant Field Value private static final long
serialVersionUID
4579749871479306251L
-
net.sf.basedb.core.data.SchemaVersionData Modifier and Type Constant Field Value public static final String
BASE_APP_ID
"net.sf.basedb.core"
-
net.sf.basedb.core.data.SessionData Modifier and Type Constant Field Value public static final int
MAX_AUTHENTICATION_METHOD
255
public static final int
MAX_LOCATION_LENGTH
255
public static final int
MAX_LOGIN_COMMENT_LENGTH
65535
public static final int
MAX_REMOTE_ID_LENGTH
255
-
net.sf.basedb.core.data.SettingData Modifier and Type Constant Field Value public static final int
MAX_NAME_LENGTH
255
public static final int
MAX_VALUE_LENGTH
65535
-
net.sf.basedb.core.data.SoftwareData Modifier and Type Constant Field Value public static final int
MAX_VERSIONSTRING_LENGTH
255
-
net.sf.basedb.core.data.SystemData Modifier and Type Constant Field Value public static final int
MAX_SYSTEM_ID_LENGTH
255
-
net.sf.basedb.core.data.UnitData Modifier and Type Constant Field Value public static final int
MAX_SYMBOL_LENGTH
255
-
net.sf.basedb.core.data.UserData Modifier and Type Constant Field Value public static final int
MAX_ADDRESS_LENGTH
255
public static final int
MAX_EMAIL_LENGTH
255
public static final int
MAX_EXTERNAL_ID_LENGTH
255
public static final int
MAX_FAX_LENGTH
255
public static final int
MAX_LOGIN_LENGTH
255
public static final int
MAX_ORGANISATION_LENGTH
255
public static final int
MAX_PHONE_LENGTH
255
public static final int
MAX_URL_LENGTH
255
-
net.sf.basedb.core.data.UserDeviceData Modifier and Type Constant Field Value public static final int
MAX_LOCATION_LENGTH
255
public static final int
MAX_REMOTE_ID_LENGTH
255
public static final int
MAX_TOKEN_LENGTH
255
public static final int
MAX_USER_AGENT_LENGTH
65535
-
net.sf.basedb.core.data.VersionedParameter Modifier and Type Constant Field Value private static final long
serialVersionUID
840111442332381385L
-
net.sf.basedb.core.data.keyring.GroupGroups Modifier and Type Constant Field Value private static final long
serialVersionUID
3058557529392800869L
-
net.sf.basedb.core.data.keyring.GroupKeys Modifier and Type Constant Field Value private static final long
serialVersionUID
3951186057137611850L
-
net.sf.basedb.core.data.keyring.GroupProjects Modifier and Type Constant Field Value private static final long
serialVersionUID
-7931224932031764513L
-
net.sf.basedb.core.data.keyring.PluginKeys Modifier and Type Constant Field Value private static final long
serialVersionUID
-8514403856902670522L
-
net.sf.basedb.core.data.keyring.ProjectKeys Modifier and Type Constant Field Value private static final long
serialVersionUID
3491327528105067768L
-
net.sf.basedb.core.data.keyring.RoleKeys Modifier and Type Constant Field Value private static final long
serialVersionUID
-2640304357731797636L
-
net.sf.basedb.core.data.keyring.UserGroups Modifier and Type Constant Field Value private static final long
serialVersionUID
-3481737087412081175L
-
net.sf.basedb.core.data.keyring.UserKeys Modifier and Type Constant Field Value private static final long
serialVersionUID
2419369267333836877L
-
net.sf.basedb.core.data.keyring.UserProjects Modifier and Type Constant Field Value private static final long
serialVersionUID
1268159949109572997L
-
net.sf.basedb.core.data.keyring.UserRoles Modifier and Type Constant Field Value private static final long
serialVersionUID
-4810248574594702409L
-
net.sf.basedb.core.hibernate.SessionWrapper Modifier and Type Constant Field Value private static final long
serialVersionUID
8075255339774194513L
-
net.sf.basedb.core.hibernate.StatelessSessionWrapper Modifier and Type Constant Field Value private static final long
serialVersionUID
-771179312268431157L
-
net.sf.basedb.core.log.LoggingInterceptor Modifier and Type Constant Field Value private static final long
serialVersionUID
-9108587050205509572L
-
net.sf.basedb.core.plugin.About Modifier and Type Constant Field Value public static final int
MAX_INFORMATION_LENGTH
255
-
net.sf.basedb.core.plugin.AbstractAnalysisPlugin Modifier and Type Constant Field Value protected static final String
CHILD_DESCRIPTION
"childDescription"
protected static final String
CHILD_NAME
"childName"
protected static final String
SOURCE_BIOASSAYS
"bioAssays"
protected static final String
SOURCE_BIOASSAYSET
"source"
protected static final String
SOURCE_DERIVEDBIOASSAY
"source"
protected static final String
TRANSFORMATION_NAME
"transformationName"
-
net.sf.basedb.core.plugin.AbstractExporterPlugin Modifier and Type Constant Field Value protected static final String
OVERWRITE
"overwrite"
protected static final String
SAVE_AS
"saveAs"
-
net.sf.basedb.core.plugin.AbstractPlugin Modifier and Type Constant Field Value protected static final String
COPY_ANNOTATIONS
"copyAnnotations"
protected static final String
OVERWRITE_ANNOTATIONS
"overwriteAnnotations"
-
net.sf.basedb.core.plugin.Request Modifier and Type Constant Field Value public static final String
COMMAND_CONFIGURE_JOB
"_config_job"
public static final String
COMMAND_CONFIGURE_PLUGIN
"_config_plugin"
public static final String
COMMAND_EXECUTE
"_exec"
-
net.sf.basedb.core.signal.SignalException Modifier and Type Constant Field Value private static final long
serialVersionUID
7302030842713856895L
-
net.sf.basedb.core.signal.SignalReceivedException Modifier and Type Constant Field Value private static final long
serialVersionUID
-1498169053139644792L
-
net.sf.basedb.core.signal.UnsupportedSignalException Modifier and Type Constant Field Value private static final long
serialVersionUID
5468472782043551962L
-
net.sf.basedb.core.snapshot.AnnotationSetSnapshot Modifier and Type Constant Field Value private static final long
serialVersionUID
-7092844726985995667L
-
net.sf.basedb.core.snapshot.AnnotationSnapshot Modifier and Type Constant Field Value private static final long
serialVersionUID
1167459472860706199L
-
net.sf.basedb.plugins.AnnotationFlatFileImporter Modifier and Type Constant Field Value private static final String
CONFIGURE_IMPORT
"configure_import"
private static final String
CONFIGURE_MAPPING
"configure_mapping"
-
net.sf.basedb.plugins.Base1PluginExecuter Modifier and Type Constant Field Value private static final String
COMMAND_MANUAL_CONFIG
"COMMAND_MANUAL_CONFIG"
-
net.sf.basedb.plugins.BaseFileExporterPlugin Modifier and Type Constant Field Value private static final String
FORMAT_BASEFILE_MATRIX
"matrix"
private static final String
FORMAT_BASEFILE_SERIAL
"serial"
public static final String
PARAMETER_FILEFORMAT
"fileformat"
-
net.sf.basedb.plugins.BfsExporterPlugin Modifier and Type Constant Field Value public static final String
PARAMETER_FILEFORMAT
"fileformat"
public static final String
PARAMETER_FILENAMEGENERATOR
"filenamegenerator"
-
net.sf.basedb.plugins.HelpImporter Modifier and Type Constant Field Value private static final String
dtdFileName
"helpfile.dtd"
-
net.sf.basedb.plugins.PluginConfigurationImporter Modifier and Type Constant Field Value private static final String
COMMAND_SELECT_CONFIGURATIONS
"select_configurations"
private static final String
dtdFileName
"plugin-configuration-file.dtd"
-
net.sf.basedb.plugins.RawDataFlatFileImporter Modifier and Type Constant Field Value public static final String
COMMAND_CONFIGURE_PARSER
"config_parser"
-
net.sf.basedb.plugins.batchimport.AbstractItemImporter<I extends BasicItem> Modifier and Type Constant Field Value private static final String
CONFIGURE_OPTIONS
"configure_options"
-
net.sf.basedb.plugins.batchimport.AnyToAnyImporter Modifier and Type Constant Field Value private static final String
CONFIGURE_OPTIONS
"configure_options"
-
net.sf.basedb.plugins.executor.ExternalProgramExecutor Modifier and Type Constant Field Value private static final String
COMMAND_CONFIGURE_EXTERNAL_PARAMETERS
"CREATE_EXTERNAL_PARAMETERS"
public static final String
NAMESPACE_EXPORTER
"exporter"
public static final String
NAMESPACE_EXTERNAL
"external"
public static final String
NAMESPACE_IMPORTER
"importer"
public static final String
PARAMETER_DEBUG_MODE
"debugMode"
public static final String
PARAMETER_EXPORTER_CLASS
"exporterClass"
public static final String
PARAMETER_EXTERNAL_CMDLINE
"externalProgramCmdLine"
public static final String
PARAMETER_EXTERNAL_PARAMETERS
"externalParameters"
public static final String
PARAMETER_EXTERNAL_PATH
"externalProgramPath"
public static final String
PARAMETER_IMPORTER_CLASS
"importerClass"
public static final String
PARAMETER_NUM_CHANNELS
"numChannels"
public static final String
PARAMETER_RAW_DATA_TYPE
"rawDataType"
public static final String
PARAMETER_SOURCE_BIOASSSAYSET
"source"
public static final String
PARAMETER_SOURCE_TRANSFORM
"sourceTransform"
-
net.sf.basedb.plugins.executor.IOSupport Modifier and Type Constant Field Value public static final String
COMMAND_CONFIGURE_IO_JOB
"CONFIG_IO_JOB"
public static final String
COMMAND_CONFIGURE_IO_PLUGIN
"CONFIG_IO_PLUGIN"
public static final String
COMMAND_EXECUTE_IO_JOB
"EXECUTE_IO_JOB"
-
net.sf.basedb.plugins.util.Parameters Modifier and Type Constant Field Value public static final String
CHARSET_PARAMETER
"charset"
public static final String
CHILD_DESCRIPTION
"childDescription"
public static final String
CHILD_NAME
"childName"
public static final String
DATE_FORMAT_ERROR
"dateFormatError"
public static final String
DATE_FORMAT_PARAMETER
"dateFormat"
public static final String
DECIMAL_SEPARATOR_PARAMETER
"decimalSeparator"
public static final String
DEFAULT_ERROR
"defaultError"
public static final String
DRY_RUN_PARAMETER
"dryRun"
public static final String
ERROR_SECTION
"errorSection"
public static final String
INVALID_USE_OF_NULL_ERROR
"invalidUseOfNullError"
public static final String
LOGFILE_PARAMETER
"logFile"
public static final String
NUMBER_FORMAT_ERROR
"numberFormatError"
public static final String
NUMBER_OUT_OF_RANGE_ERROR
"numberOutOfRangeError"
public static final String
STRING_TOO_LONG_ERROR
"stringTooLongError"
public static final String
TIMESTAMP_FORMAT_PARAMETER
"timestampFormat"
public static final String
TRANSFORMATION_NAME
"transformationName"
-
net.sf.basedb.util.Enumeration<K,V> Modifier and Type Constant Field Value private static final long
serialVersionUID
1222952912319368574L
-
net.sf.basedb.util.FileUtil Modifier and Type Constant Field Value private static final int
BUFFER_SIZE
512
-
net.sf.basedb.util.JarClassLoader Modifier and Type Constant Field Value private static final int
MAX_PARENTS
20
-
net.sf.basedb.util.NameableComparator<T extends Nameable> Modifier and Type Constant Field Value private static final long
serialVersionUID
-845369301970627620L
-
net.sf.basedb.util.ToStringComparator<T> Modifier and Type Constant Field Value private static final long
serialVersionUID
-4125738438373368082L
-
net.sf.basedb.util.XmlUtil2 Modifier and Type Constant Field Value private static final String
xmlParserClass
"org.apache.xerces.parsers.SAXParser"
-
net.sf.basedb.util.bcrypt.BCrypt Modifier and Type Constant Field Value private static final int
BCRYPT_SALT_LEN
16
private static final int
BLOWFISH_NUM_ROUNDS
16
private static final int
GENSALT_DEFAULT_LOG2_ROUNDS
10
-
net.sf.basedb.util.bfs.MetadataWriter Modifier and Type Constant Field Value public static final String
BOF_MARKER
"BFSformat"
-
net.sf.basedb.util.excel.XlsxToCsvUtil Modifier and Type Constant Field Value public static final String
XLSX_MIME_TYPE
"application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"
-
net.sf.basedb.util.export.spotdata.MatrixBaseFileExporter Modifier and Type Constant Field Value public static final String
SUBTYPE
"matrix"
-
net.sf.basedb.util.export.spotdata.MatrixBfsExporter Modifier and Type Constant Field Value public static final String
SUBTYPE
"matrix"
-
net.sf.basedb.util.export.spotdata.SerialBaseFileExporter Modifier and Type Constant Field Value public static final String
SUBTYPE
"serial"
-
net.sf.basedb.util.export.spotdata.SerialBfsExporter Modifier and Type Constant Field Value public static final String
SUBTYPE
"serial"
-
net.sf.basedb.util.formatter.PrefixSuffixFormatter<T> Modifier and Type Constant Field Value public static final char
NBSP
160
-
net.sf.basedb.util.importer.spotdata.FirstPassSectionSpotsParser Modifier and Type Constant Field Value public static final String
SECTION
"spots"
-
net.sf.basedb.util.jep.net.sf.basedb.util.jep.FunctionSafeJep.SafeFunctionTable Modifier and Type Constant Field Value private static final long
serialVersionUID
4430148600636575401L
-
net.sf.basedb.util.jep.net.sf.basedb.util.jep.FunctionSafeJep.UnknownFunction Modifier and Type Constant Field Value private static final long
serialVersionUID
8761224046553039046L
-
net.sf.basedb.util.overview.OverviewUtil Modifier and Type Constant Field Value private static final String
presetsSetting
"experiment.overview.presets"
-
net.sf.basedb.util.overview.loader.BasicItemNodeLoader<I extends BasicItem> Modifier and Type Constant Field Value public static final boolean
ALLOW_ROOT_NODE
true
public static final boolean
DENY_ROOT_NODE
false
-
net.sf.basedb.util.parser.FlatFileParser Modifier and Type Constant Field Value public static final int
DEFAULT_MAX_UNKNOWN_LINES
100
-
net.sf.basedb.util.plot.net.sf.basedb.util.plot.HistogramPlot.HistogramBin Modifier and Type Constant Field Value private static final long
serialVersionUID
513573632731346456L
-
net.sf.basedb.util.plot.net.sf.basedb.util.plot.HistogramPlot.HistogramDataset Modifier and Type Constant Field Value private static final long
serialVersionUID
-515696571729019122L
-
net.sf.basedb.util.plot.net.sf.basedb.util.plot.HistogramPlot.HistogramSeries Modifier and Type Constant Field Value private static final long
serialVersionUID
8540300441782223733L
-
net.sf.basedb.util.uri.ConnectionManagerUtil Modifier and Type Constant Field Value public static final String
EXTENSION_POINT_ID
"net.sf.basedb.core.uri.connection-manager"
-
net.sf.basedb.util.zip.AbstractFileUnpacker Modifier and Type Constant Field Value protected static final String
OVERWRITE
"overwrite"
protected static final String
UNPACK_DIRECTORY
"unpackDirectory"
protected static final String
ZIP_FILE
"zipFile"
-
net.sf.basedb.util.zip.TarUtil Modifier and Type Constant Field Value public static final String
LONG_LINK_NAME
"././@LongLink"
public static final int
MAX_NAME_LENGTH
100