Package net.sf.basedb.clients.web.servlet

Class ExperimentExplorerPlotServlet

java.lang.Object

javax.servlet.GenericServlet

javax.servlet.http.HttpServlet

net.sf.basedb.clients.web.servlet.ExperimentExplorerPlotServlet

All Implemented Interfaces:

Serializable, Servlet, ServletConfig

public class ExperimentExplorerPlotServlet
extends HttpServlet

Plot servlet for generating plots from experiment explorer.

Version:

2.14

Author:

Nicklas

See Also:

• Serialized Form

Last modified

$Date: 2021-06-04 12:40:45 +0200 (Fri, 04 Jun 2021) $

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	ExperimentExplorerPlotServlet.ColumnKey	Uses as a column key in the plots.

Field Summary

Fields

Modifier and Type	Field	Description
private String	defaultFormat
private int	defaultHeight
private int	defaultWidth
private int	maxHeight
private int	maxWidth
private static final long	serialVersionUID

Constructor Summary

Constructors

Constructor	Description
ExperimentExplorerPlotServlet()

Method Summary

Modifier and Type	Method	Description
BoxAndWhiskerItem	calculateBoxAndWhiskerStatistics(List<Float> values)	Creates a box-and-whisker data holder for the given list of values.
void	doGet(HttpServletRequest request, HttpServletResponse response)
float	getPercentile(List<? extends Number> values, int percentile)	Calculates the percentile values from a sorted list of values.
void	init()
private void	saveImageToFile(DbControl dc, BufferedImage image, String path, String format, boolean overwrite)

Methods inherited from class javax.servlet.http.HttpServlet

doDelete, doHead, doOptions, doPost, doPut, doTrace, getLastModified, service, service

Methods inherited from class javax.servlet.GenericServlet

destroy, getInitParameter, getInitParameterNames, getServletConfig, getServletContext, getServletInfo, getServletName, init, log, log

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

serialVersionUID

private static final long serialVersionUID

See Also:

• Constant Field Values

maxWidth

private int maxWidth

maxHeight

private int maxHeight

defaultWidth

private int defaultWidth

defaultHeight

private int defaultHeight

defaultFormat

private String defaultFormat

Constructor Details

ExperimentExplorerPlotServlet

public ExperimentExplorerPlotServlet()

Method Details

init

public void init()
          throws ServletException

Overrides:

init in class GenericServlet

Throws:

ServletException

doGet

public void doGet(HttpServletRequest request,
 HttpServletResponse response)
           throws IOException,
ServletException

Overrides:

doGet in class HttpServlet

Throws:

IOException

ServletException

saveImageToFile

private void saveImageToFile(DbControl dc,
 BufferedImage image,
 String path,
 String format,
 boolean overwrite)
                      throws IOException

Throws:

IOException

calculateBoxAndWhiskerStatistics

public BoxAndWhiskerItem calculateBoxAndWhiskerStatistics(List<Float> values)

Creates a box-and-whisker data holder for the given list of values. The data holder will be populated with the median and the 5th, 25th, 75th and 95th percentile values as follows:

• median = BAWI.getMedian()
• 5th percentile = BAWI.getMinRegularValue()
• 25th percentile = BAWI.getQ1()
• 75th percentile = BAWI.getQ3()
• 95th percentile = BAWI.getMaxRegularValue()

The mean and outlier values are currently not calculated (may change in the future).

Parameters:

values - The list of values which must be sorted in ascending order

Returns:

A BoxAndWhiskerItem object

getPercentile

public float getPercentile(List<? extends Number> values,
 int percentile)

Calculates the percentile values from a sorted list of values. If the percentile falls between two elements in the list the average of the two nearest elements are used.

Parameters:

values - The values which must be sorted

percentile - The percentile, a value between 0 and 100

Returns:

The percentile value, or Float.NaN if it could not be calculated