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About AboutBean AboutImpl AbsConverter AbsExpression AbsoluteProgressReporter AbstractAnalysisPlugin AbstractBatcher AbstractBioAssaySetExporter AbstractCustomRequestHandler AbstractDataFileHandler AbstractDataWriterFactory AbstractDbEngine AbstractEntityQuery AbstractExporterPlugin AbstractFieldConverter AbstractFilenameGenerator AbstractFileUnpacker AbstractFlatFileImporter AbstractHqlQuery AbstractIOSupport AbstractItemImporter AbstractJepConversionFunction AbstractJspActionFactory AbstractJspFactory AbstractJspRendererFactory AbstractNodeLoader AbstractOnSaveAction AbstractPlugin AbstractQuery AbstractQueryCache AbstractResultList AbstractRPCClient AbstractRPCService AbstractSignalHandler AbstractSignalReceiver AbstractSignalTransporter AbstractSqlQuery AccessControlled AccountExpiredException Action ActionClassEventFilter ActionFactory ActionIterator AddAllTransformer AddConverter AddExpression AdvancedFieldConverter Affymetrix AffymetrixFileHandler Agent AgentController AgentSignalReceiver Aggregations AjaxWriter AllEventsFilter AllOfFilter AllowAnyHostNameVerifyer AlreadyLoggedInException AnalysisFilterPlugin AndConverter AndRestriction Annotatable AnnotatableData AnnotatableProxy AnnotatedData AnnotatedItem AnnotatedItemInfo Annotation Annotation.QueryRuntimeFilterImpl AnnotationAssayField AnnotationBetweenRestriction AnnotationData AnnotationFilter AnnotationFlatFileImporter AnnotationFlatFileImporter.AnnotationValue AnnotationFlatFileImporter.NewAnnotations AnnotationInfo AnnotationInRestriction AnnotationLoader AnnotationLogger AnnotationModel AnnotationNameGenerator AnnotationParser AnnotationRestriction Annotations AnnotationSet AnnotationSet.QueryRuntimeFilterImpl AnnotationSetData AnnotationSetLogger AnnotationSetSnapshot AnnotationSetterPlugin AnnotationSimpleRestriction AnnotationSnapshot AnnotationType AnnotationTypeCategory AnnotationTypeCategoryData AnnotationTypeClient AnnotationTypeData AnnotationTypeFilter AnnotationTypeInfo AnnotationTypeService AnnotationUtil AnnotationUtil.AnnotatableWrapper AnnotationValidator AnnotationWriter AnyToAny AnyToAnyData AnyToAnyLoader AnyToAnyNameGenerator AnyToAnyValidator Application Application.DbCleaner Application.Pinger Application.SecondaryStorageControllerTask Application.SessionControlCacheCleaner ArrayBatch ArrayBatchData ArrayBatchImporter ArrayBatchLoader ArrayBatchValidator ArrayDesign ArrayDesignBlock ArrayDesignBlockData ArrayDesignClient ArrayDesignData ArrayDesignImporter ArrayDesignInfo ArrayDesignLoader ArrayDesignPlate ArrayDesignPlateData ArrayDesignService ArrayDesignValidator ArrayIterator ArraySlide ArraySlideData ArraySlideImporter ArraySlideLoader ArraySlideValidator AscOrder AssayField AssayPropertyField ASTConstantConverter ASTFunNodeConverter ASTVarNodeConverter AuthenticationException AuthenticationInformation Authenticator AutoChildNodeLoader AutoDetectFileFormat AutoDetectFileFormat.IsImportableFilter AutoDetectingImporter AutoJoiner Base Base1FieldConverter Base1PluginExecuter Base1PluginExecuter.Base1JobParameterType BaseException BaseFileDataSource BaseFileExporter BaseFileExporterPlugin BaseFileExporterPlugin.ExtendedDynamicField BaseFileExporterSupport BaseFileImporter BaseFileImporter.RawDataProxy BaseFileImporter.ReporterProxy BaseFileImporterSupport BaseFileInfo BaseFileInfo.ChildBioAssay BaseFileInfo.SpotSectionInfo BaseFileParser BaseFileSectionParser BaseFileWrapper BaseFileWriter BaseInputStreamLocator BasicBatcher BasicChildItem BasicData BasicItem BasicItemFilter BasicItemInfo BasicItemNodeLoader BasicItemNodeLoaderFactory BasicItemNodeValidatorFactory BasicItemToIdTransformer BasicNodeValidator BatchableData BatchedPropertyInfo Batcher BatchUtil BeanActionFactory BetweenRestriction BfsExporter BfsExporterPlugin BfsExporterPlugin.ExtendedExportableField BfsExporterSupport BfsImporter BfsImporter.ProgressEventHandler BfsImporterSupport BfsParser BioAssay BioAssayData BioAssayExperimentalFactorLoader BioAssaySet BioAssaySetClient BioAssaySetData BioAssaySetExporter BioAssaySetExporter.QueryItem BioAssaySetExporter.QueryItemTitleComparator BioAssaySetFilterUtil BioAssaySetInfo BioAssaySetService BioAssaySetUtil BioMaterial BioMaterialData BioMaterialEvent BioMaterialEvent.Type BioMaterialEventData BioMaterialEventLogger BioMaterialList BioMaterialListData BioMaterialSourceEventData BioPlate BioPlateData BioPlateEvent BioPlateEventData BioPlateEventParticipant BioPlateEventParticipantData BioPlateEventType BioPlateEventTypeData BioPlateImporter BioPlateType BioPlateTypeData BioSource BioSourceData BioSourceImporter BioSourceLoader BioSourceToSampleTransformer BioSourceValidator BioWell BioWell.LockMode BioWellData BlockInfo Body BooleanFormatter BooleanFormatter.Type BooleanParameterType BooleanParameterValueData Bundle Button Button ButtonAction ButtonBean ButtonGroup Bzip2FilePacker CaseExpression CdfFileHandler CdfFileReporterImporter CelFileHandler Cell CellValue ChainedProgressReporter ChangeHistory ChangeHistoryData ChangeHistoryDetailData ChangeHistoryUtil ChangeType ChannelFunction CharacterEncodingFilter ChildItem ChildNodeDirection ClassLocal ClassMapErrorHandler ClassUtil Client ClientContext ClientData ClientDefaultSetting ClientDefaultSettingData CmdLine ColFunction CollectionTransformer ColorFormatter ColorGenerator Coloring ColoringData ColumnDef ColumnMapper Columns CombiningEventFilter CommonData CommonItem CommonItemInfo CompactButtonRenderer CompactButtonRendererFactory ComparableComparator CompileAll ComponentData CompoundMapper Config ConfigurableServiceFactory ConfigurationException ConfigureByExample ConnectionClosedException ConsoleProgressReporter ConstantMapper ContextData ContextIndex ContextKey ContextUtil ContextUtil.ContextResult ContextUtil.IsInContextFilter Controlled ConverterFactory Coordinate CountExpression CropStringMapper CustomRequestHandler Data DatabaseException DataCube DataCube.RawMappingQuery DataCubeColumn DataCubeColumnData DataCubeData DataCubeExtraValue DataCubeExtraValueData DataCubeFilter DataCubeFilterData DataCubeLayer DataCubeLayerData DataFileHandler DataFileLoader DataFileMetadataReader DataFileType DataFileTypeData DataFileTypeInfo DataFileValidator DataFileValidator DataLoader DataNoFunction DataParser DataQuery DataQueryWrapper DataResultIterator DataWriter DataWriterFactory DateFormatException DateFormatter DateParameterType DateParameterValueData DateUtil DbControl DbControl.SaveIf DbEngine DbLogManager DbLogManagerFactory DebugOnSaveActionFactory DebugOnSaveActionFactory.DebugOnSaveAction DefaultDbEngine DefaultEntityLogger DefaultFilter DefaultRequestHandler DelegatingSignalHandler DescOrder DetachedItemException Diff3 DirectionalCacheKey Directory DirectoryData DisallowedValueException DiskConsumable DiskConsumableData DiskFileWrapper DiskInputStreamLocator DiskUsage DiskUsageData DiskUsageStatistics DivideConverter DivideExpression DoubleParameterType DoubleParameterValueData Download DummyJobExecutor DummyService DuplicateWizardException Dynamic DynamicExtraValueQuery DynamicField DynamicFilter DynamicJoin DynamicPositionQuery DynamicPositionQueryJoiners DynamicPositionQueryJoiners.ExtraValueJoiner DynamicPositionQueryJoiners.ReporterJoiner DynamicQuery DynamicQueryWrapper DynamicRawDataQuery DynamicReporterQuery DynamicRestriction DynamicResultIterator DynamicSpotQuery DynamicSpotQueryJoiners DynamicSpotQueryJoiners.ExtraValueJoiner DynamicSpotQueryJoiners.RawDataJoiner DynamicSpotQueryJoiners.ReporterJoiner DynamicSpotQueryJoiners.ReporterListJoiner DynamicUtil DynamicUtil.SelectedInfo EditUtil EmailUtil EncoderDecoder EncodeUtil EngineFactory EnhancedThreadSignalHandler EntityDetails EntityLogger EntityQuery EntityQueryWrapper Enumeration Enumeration.Entry EqRestriction EqualsConverter EqualsFilter EqualsHelper ErrorHandler ErrorHandler ErrorHandlerFactory EventFilter EventHandler EventHandler EventType EventType EventTypeFilter ExceptionCatcher ExceptionInterruptHandler ExecuteUpdateWork ExpConverter Experiment ExperimentalFactorLoader ExperimentalFactorValidator ExperimentClient ExperimentData ExperimentExplorer ExperimentExplorer.AnnotationGroup ExperimentExplorer.AnnotationSummary ExperimentExplorer.ReporterPositions ExperimentExplorerPlotServlet ExperimentExplorerPlotServlet.ColumnKey ExperimentInfo ExperimentLoader ExperimentOverview ExperimentService ExperimentValidator ExpExpression ExportableField ExportableFieldConverter ExportableFieldFactory ExportableFieldFormatter ExportedProperty ExportOutputStream ExportTemplate Expression Expressions ExpressionSelect ExtendableData ExtendedProperties ExtendedProperty ExtendedPropertyAccessor ExtendedPropertyAccessor.GetterSetter ExtendedPropertyFormatter ExtendedPropertyInfo ExtendedPropertyLinker Extension ExtensionBean ExtensionContext ExtensionPoint ExtensionPointBean ExtensionPointContext ExtensionPointEventFilter ExtensionsControl ExtensionsControl.AutoInstallTask ExtensionsDirectory ExtensionsFile ExtensionsFilter ExtensionsInvoker ExtensionsServlet ExternalProgramExecutor ExternalProgramExecutor.RequestWrapper ExternalProgramExecutor.ResponseWrapper Extract ExtractData ExtractImporter ExtractLoader ExtractToLabeledExtractTransformer ExtractToSampleTransformer ExtractValidator ExtraFileImporter ExtraFloatParser ExtraValue ExtraValue.CoordinateType ExtraValueData ExtraValueExpression ExtraValueFunction ExtraValueJoin ExtraValueType ExtraValueTypeData Factories Failure FallbackIdMethod Feature FeatureBatcher FeatureCoordinate FeatureData FeatureIdentificationMethod FieldConverter File File.Action FileAttachable FileAttachableData FileCopyRunnable FileData FileExportOutputStream FileImportInputStream FilenameGenerator FileOnlyImporterSupport FilePacker FileParameterType FilePathFormatter FileServer FileServerData FileSet FileSet.DataFileHandlerWrapper FileSet.QueryRuntimeFilterImpl FileSetData FileSetMember FileSetMember.QueryRuntimeFilterImpl FileSetMemberData FileSetMemberLoader FileSetMemberLogger FileSetMemberNameGenerator FileStoreEnabled FileStoreEnabledData FileStoreUtil FileType FileTypeData FileTypeIndex FileUnpacker FileUpload FileUpload.SectionHeaders FileUpload.UploadStatus FileUploadProgress FileUtil FileWrapper Filter FilterBatcher FilterUtil FirstPassSectionSpotsParser Fix FixedButtonFactory FixedMenuItemFactory FixedTabFactory FlatFileParser FlatFileParser.Data FlatFileParser.Line FlatFileParser.LineType FloatConverter FloatExpression FloatParameterType FloatParameterValueData Form Formatter FormatterFactory FormatterSettings Formula Formula.AverageMethod Formula.Parser Formula.Type FormulaData FormulaFilter ForwardingSignalHandler FunctionSafeJep FunctionSafeJep.SafeFunctionTable FunctionSafeJep.UnknownFunction GalExporter GenericBaseDataWriterFactory GenericDiskDataWriterFactory GenericExtraFileImporter GenericIntensityParser GenericOverview GeometricMeanExpression GlobalDefaultSetting GlobalDefaultSettingData GreaterConverter GreaterEqualsConverter Group Group.QueryRuntimeFilterImpl GroupData GroupGroups GroupKeys GroupPermissions GroupProjects GteqRestriction GtRestriction GuiContext GuiContext.Type GuiContextData GzipFilePacker Hardware HardwareData HardwareLoader HardwareType HardwareTypeData HardwareValidator HasAnnotationRestriction Head Header Help Help HelpData HelpExporter HelpImporter HibernateUtil Hidden HideableSection HistogramPlot HistogramPlot.HistogramBin HistogramPlot.HistogramDataset HistogramPlot.HistogramSeries HistogramPlot.TempSeries HistogramPlot.YAggregate Hql HqlElementsExpression HqlEntityExpression HqlEntityParameterExpression HqlExpression HqlIndexExpression HqlInnerJoin HqlLeftJoin HqlPropertyExpression HqlQuery HqlQueryJoiners HqlQueryJoiners.ReporterListJoiner HqlRightJoin HqlSizeExpression HTML HttpUtil Hybridization HybridizationData HybridizationImporter HybridizationLoader HybridizationValidator Icon Identifiable IdentifiableData IdentifiableFormatter IdentityEncoderDecoder IdentityFilter IdentityUnitConverter IdMethod IfConverter IlluminaRawDataImporter IlluminaRawDataImporter.BatchAndMapHolder Image Image.Format ImageData ImageLoader ImageLogger ImmediateDownloadExporter ImportInputStream Include IncludeContentTabFactory IncludeExcludeFilter IndexedCacheKey InfoRequestHandler InputStreamCombiner InputStreamLocator InputStreamSplitter InputStreamTracker InReporterListFunction InRestriction Install Install.PlatformFT InstanceOfFilter IntegerConverter IntegerExpression IntegerFormatter IntegerParameterType IntegerParameterValueData IntegerUtil IntensityCalculator IntensityCalculatorPlugin IntensityCalculatorUtil IntensityCalculatorUtil.JepIntensityCalculatorImpl IntensityFormula IntensityTransform InteractivePlugin InternalIdMethod InternalJobQueue InternalJobQueue.JobQueueKeyring InternalSlotManager InternalStorageController InternalStorageController.StorageKeyring InterruptHandler InvalidAnnotationException InvalidDataException InvalidPasswordException InvalidPasswordException InvalidPathException InvalidRelationException InvalidUseOfNullException InverseFilter InvokationContext IOSupport Item Item.DefinedPermissions ItemAlreadyExistsException ItemContext ItemContext.PropertyFilterPair ItemContext.SortDirection ItemInUseException ItemKey ItemKeyData ItemModifiedException ItemNotFoundException ItemParameterType ItemParameterValueData ItemProxy ItemQuery ItemQueryLoader ItemQueryWrapper ItemResultIterator ItemResultList ItemTypeFilter JarClassLoader JarClassLoader.JarInfo JdbcWork Jep JepConversionFunction JepDynamicField JepExpressionFunction JepExtraValueCalculator JepFunction JepIntensityTransformer JepMapper JepRestrictionFunction Job Job.ExecutionTime Job.ProgressReporterImpl Job.Status Job.Type JobAgent JobAgentConnection JobAgentData JobAgentInfo JobAgentServerConnection JobAgentServerConnection.ListenerThread JobAgentServerConnection.RequestHandlerThread JobAgentSettings JobAgentSettingsData JobData JobExecutor JobInfo JobQueueChecker JobRunner Join JoinType JspContext Key KeyData KeyPermission Keyring Label Label LabelData LabeledExtract LabeledExtractData LabeledExtractImporter LabeledExtractLoader LabeledExtractNameGenerator LabeledExtractToExtractTransformer LabeledExtractValidator LessConverter LessEqualsConverter LikeRestriction LinearUnitConverter LineNoFunction ListUtil LocalSignalReceiver LocalSignalTransporter Location Log2Function LogarithmConverter LogControl LogExpression LoggableData LoggingErrorHandlerFactory LoggingInterceptor LogManager LogManagerFactory LogUtil LongParameterType LongParameterValueData LookupFormatter LowessNormalization LowessNormalization.CallableWorker LowessNormalization.SpotData LteqRestriction LtRestriction ManualTransformCreator MAParser MAPlotFactory Mapper MappingBatcher MappingCoordinate MasterSlotManager MasterSlotManager.RemoteSlot MasterSlotManager.RemoteSlotRequestHandler MasterSlotManager.RemoteSlotTimeoutChecker MatrixBaseFileExporter MatrixBfsExporter MatrixModel MatrixSpotIntensityEventHandler MaxExpression MD5 MeanExpression MeanFunction MeanRawDataPropertyExpression MeasuredBioMaterial MeasuredBioMaterialData MedianRatioNormalization MedianRatioNormalization.SpotData Menu Menuitem MenuItemAction MenuItemAction.MenuType MenuItemBean Menuseparator Message MessageData Metadata Metadata.BasicData2ItemPropertyPath Metadata.BasicItem2DataPropertyPath Metadata.CollectionPropertyPath Metadata.CombinedPropertyPath Metadata.ComponentPropertyPath Metadata.DateCopyPropertyPath Metadata.EntityPropertyPath Metadata.EvictPropertyPath Metadata.IdentifierPropertyPath Metadata.MapPropertyPath Metadata.NoopPropertyPath Metadata.PropertyPath Metadata.ReporterScore2DataPropertyPath MetadataModel MetadataModel.Section MetadataModel.SectionEntry MetadataParser MetadataWriter MimeType MimeTypeData MinExpression ModeInfo MultiEventHandler MultiFormatter MultiPermissions MultiplyConverter MultiplyExpression MultiPropertyIdMethod MultiProtocolRequestHandler MultiStepCollectionTransformer MultiUpdateWork MySQLEngine Nameable NameableComparator NameableData NameableFormatter NameableInfo NameableNameGenerator NameableNodeValidator NameablePluginAdaptor NameableUtil NamespaceParameterValuesWrapper NamespacePluginParameter NamespaceRequestWrapper NaturalLogarithmConverter Navigator NegateExpression NeqRestriction NestedIterator News News.QueryRuntimeFilterImpl NewsData Node Node.Type NodeCache NodeFactory NodeLoader NodeLoaderFactory NodeNameGenerator NodeValidator NodeValidatorFactory NoneOfFilter NonRestartable NotConverter Note NotEqualsConverter NotInReporterListFunction NotLoggedInException NotNullFilter NotRestriction NullIfExceptionMapper NullNodeLoader NullNodeValidator NumberFormatter NumberFormatUtil NumberOutOfRangeException OlderThanFileFilter OneOfFilter OnSaveAction OnSaveRenderer Operator OrConverter Order Orders OrRestriction OverviewContext OverviewPlotAction OverviewPlotBean OverviewUtil Ownable OwnableData OwnableUtil OwnableUtil OwnedData OwnedItem OwnedItemInfo PackedFileExporter Page Panel ParameterDefinition ParameterException ParameterExpression ParameterInfo Parameters ParameterType ParameterValueData ParameterValues ParameterValuesImpl ParameterValuesWrapper ParentBioMaterialLoader PasswordData Path Path Path.Type PathConverter PathElement PathParameterType PathSetter PathType PauseRequestHandler PerformanceTimer Permission PermissionButtonFactory PermissionDeniedException PermissionMenuItemFactory Permissions PermissionTemplate PermissionTemplateData PermissionUtil PingRequestHandler PlainTextTemplate Plate PlateCoordinate PlateData PlateEvent PlateEventData PlateEventLogger PlateEventType PlateEventTypeData PlateFlatFileImporter PlateGeometry PlateGeometryData PlateMapping PlateMappingData PlateMappingExporter PlateMappingImporter PlateType PlateTypeData Platform PlatformData PlatformFileType PlatformFileTypeData PlatformLoader PlatformValidator PlatformVariant PlatformVariantData PlotAnnotation PlotGenerator PlotGeneratorBean PlotServlet PlotServlet.CFResultIterator PlotServlet.CFSqlResult Plugin Plugin.MainType PluginConfigInfo PluginConfiguration PluginConfigurationData PluginConfigurationExporter PluginConfigurationImporter PluginConfigurationRequest PluginDefinition PluginDefinitionData PluginExecutionRequest PluginInfo PluginKeys PluginParameter PluginPermission PluginPermission PluginRequest PluginResponse PluginSessionControl PluginType PluginTypeData PooledChildrenTransformer PooledParentsTransformer POP3Authenticator PositionBatcher PositionEventHandler PositionExtraValueBatcher PositionFunction PostgresDbEngine PowerExpression PredefinedQuery PrefixSuffixFormatter PrefixSuffixRenderer Presets Presets.Preset PresetSelector PrintMapFlatFileImporter PrintMapFlatFileImporter.FormatType PrintMapFlatFileImporter.MetaBlock PrintMapFlatFileImporter.Section PriorityComparator ProcessJobExecutor ProcessJobExecutor.StreamRedirector ProgramParameter ProgressReporter ProgressReporterSignalHandler Project Project.Default Project.QueryRuntimeFilterImpl ProjectClient ProjectData ProjectInfo ProjectKey ProjectKeyData ProjectKeys ProjectPermission ProjectPermissions ProjectService PropertyFilter PropertyFilter PropertyFilterData PropertyIdMethod PropertyValue Protocol ProtocolData ProtocolLoader ProtocolParameterLoader ProtocolParameterValidator ProtocolType ProtocolTypeData ProtocolValidator ProxyActionFactory QuadraticMeanExpression Quantity QuantityData Query QueryElement QueryExecutor QueryExecutor.Cancelable QueryExecutor.CancelableSession QueryExecutor.CancelableStatelessSession QueryExecutor.CancelableStatement QueryExecutor.FutureItem QueryExecutor.FutureResultSet QueryExecutor.FutureScrollIterator QueryExecutor.FutureUpdate QueryOptions QueryParameter QueryParameter QueryParameters QueryResult QueryRuntimeFilter QueryRuntimeFilterFactory QueryRuntimeFilterFactory.AnnotatableFilter QueryRuntimeFilterFactory.BasicFilter QueryRuntimeFilterFactory.ChainedFilter QueryRuntimeFilterFactory.ChildFilter QueryRuntimeFilterFactory.DenyAllFilter QueryRuntimeFilterFactory.OwnableFilter QueryRuntimeFilterFactory.RemovableFilter QueryRuntimeFilterFactory.ShareableFilter QueryRuntimeFilterManager QuerySection QueryType QueryWrapper QueryWrapper Quota Quota.QueryRuntimeFilterImpl QuotaData QuotaException QuotaIndex QuotaType QuotaTypeData RawBioAssay RawBioAssayClient RawBioAssayData RawBioAssayImporter RawBioAssayInfo RawBioAssayLoader RawBioAssayService RawBioAssayValidator RawChannelFunction RawData RawDataBatcher RawDataFlatFileImporter RawDataProperty RawDataPropertyExpression RawDataType RawDataTypes RawDataTypes.NameComparator RawDataUtil RawFunction RealJoin RealTable RegexpFileFilter Registered RegisteredData Registry Registry.AttributeKey Registry.RegisteredAbout Registry.RegisteredExtension Registry.RegisteredExtensionPoint RemoteSlotManager RemoteSlotManager.RemoteSlotPinger Removable RemovableData RemovableUtil RemoveAllTransformer Render Renderer RendererFactory Reporter ReporterBatcher ReporterClient ReporterData ReporterFlatFileImporter ReporterFunction ReporterList ReporterListData ReporterListExpression ReporterListInfo ReporterListJoin ReporterListScoreData ReporterMapFlatFileImporter ReporterPropertyExpression ReporterScore ReporterScoreQuery ReporterScoreQueryWrapper ReporterScoreResultIterator ReporterService ReporterType ReporterTypeData Request RequestHandler RequestInformation RequestWrapper ResourceBundleFactory ResourceBundleWrapper Response Response.Status Restriction Restrictions ResultIterator ResultList ResultSetWork RethrowErrorHandlerFactory RlikeRestriction Role Role.QueryRuntimeFilterImpl RoleData RoleKey RoleKeyData RoleKeys Row Rows RssNewsFeed Sample SampleData SampleImporter SampleLoader SampleToBioSourceTransformer SampleToExtractTransformer SampleValidator Scan ScanData ScanImporter ScanLoader ScanResults ScanResults.FileResults ScanValidator ScatterPlot Scheduler SchemaGenerator SchemaVersionData ScoreFunction Scripts ScrollIterator SecondaryStorageController SecondPassSectionSpotsParser SectionAssaysParser SectionReporterListParser Select Select SelectedExpression Selects SequenceFilenameGenerator SerialBaseFileExporter SerialBfsExporter SerialSpotIntensityEventHandler ServiceControllerAction ServiceFactory Services ServicesEventHandler ServicesUtil ServletExportOutputStream ServletLoader ServletWrapper Session SessionClient SessionControl SessionControl.LoginInfo SessionControl.SettingInfo SessionData SessionService SessionWrapper Setting SettingData Settings Severity Shareable ShareableData ShareableUtil ShareableUtil SharedData SharedItem SharedItemInfo SharedToRestriction ShutdownSignalSender Signal SignalException SignalHandler SignalReceivedException SignalReceiver SignalRequestHandler SignalSender SignalTarget SignalTransporter SimpleAbsoluteProgressReporter SimpleAuthenticator SimpleDynamicField SimpleErrorHandler SimpleExport SimpleProgressReporter SimpleSignalProgressReporter SimpleSignalSender SingleExtensionFilter Slot SlotManager SnapshotManager SocketSignalReceiver SocketSignalTransporter SocketUtil Software SoftwareData SoftwareLoader SoftwareType SoftwareTypeData SoftwareValidator SpotBatcher SpotExtraValueBatcher SpotImage SpotImageCreator SpotImageFormatter SpotImages SpotImagesData SpotIntensityParser SqlColumnExpression SqlQuery SqlResult SqlResultIterator SqlResultList SqrtExpression SquareRootConverter SSLUtil StandardFieldConverter StartRequestHandler StartServiceRenderer StartStopServlet StatelessSessionWrapper StaticCache StaticCache.CleanupTask StaticCache.LockEntry StaticCache.LockSafeInputStream StaticCache.LockSafeOutputStream StaticFilter StaticKeyManager StopRequestHandler StopServiceRenderer StreamCacher StringConverter StringConverter StringFormatter StringLengthComparator StringMatcher StringMatcher.FuzzyMatch StringParameterType StringParameterValueData StringTooLongException StringUtil Stylesheets Submenu SubqueryExpression SubtractConverter SubtractExpression SuggestedFilenameGenerator SumExpression SynchronizedSpotDataParser SynchronizedSpotDataParser.SynchronizedData SystemData SystemItem SystemItems Tab TabAction TabBean TabControl TabCrLfEncoderDecoder Table TableColumn TableExistsWork TableInfo TableInfo.ColumnInfo TableInfo.ForeignKeyInfo TableInfo.IndexInfo TableInfo.PrimaryKeyInfo TableInfoWork TableWriter TarFilePacker TarFileUnpacker TarUtil TempFileDataSource TextParameterValueData ThreadJobExecutor ThreadJobExecutor.ShutdownHook ThreadSignalHandler ThreadTimerTask ThrowableUtil TimestampParameterType TimestampParameterValueData ToDateExpression Toolbar ToolbarButtonRenderer ToolbarButtonRendererFactory ToolbarUtil ToSpaceEncoderDecoder ToStringComparator ToStringFormatter ToTransferable Transactional Transactional.Action TransactionDetails Transferable Transformation TransformationData Trashcan Tree Tree.Entry Type TypeWrapper UMinusConverter Unit UnitCache UnitCache.CacheKey UnitConverter UnitData UnitSymbolData UnitUtil UnknownLoginException UnmodifiableResultList UnsavedItemException UnsupportedFileFormatException UnsupportedSignalException Update Upload UploadAbortedException UploadedFile UsedQuantity User User.QueryRuntimeFilterImpl UserClientSetting UserClientSettingData UserData UserDefaultSetting UserDefaultSettingData UserGroups UserKeys UserPermissions UserProjects UserRoles Utf8PropertiesResourceBundleControl Validatable ValidationOptions Validator ValueConverter Values Values VariableConverter VariableSetter Version VersionedParameter VersionInfo ViewSpotImage VirtualColumn VirtualColumnExpression VirtualColumnExpression.WrappedExpression VirtualDb VirtualDbData VirtualTable WebException Well WellCoordinateFormatter WellData WhenStatement WrappedConfigureByExample WrappingRenderer XJspCompiler XmlLoader XMLTemplate XMLUtil XMLUtil.Validator ZipFilePacker ZipFileUnpacker ZipUnpacker