net.sf.basedb.core.data
Class ArrayDesignBlockData

java.lang.Object
  net.sf.basedb.core.data.BasicData
      net.sf.basedb.core.data.ArrayDesignBlockData

All Implemented Interfaces:

IdentifiableData

public class ArrayDesignBlockData
extends BasicData

This holds information about a block in an arraydesign. It must be lazy because features are loaded in a stateless session.

Version:

2.0

Author:

enell

See Also:

ArrayDesignBlock, Array LIMS - arrays overview

Last modified

$Date: 2009-07-28 11:06:46 +0200 (Tue, 28 Jul 2009) $

Hibernate: class

table="`ArrayDesignBlocks`" lazy="true"

Field Summary

private ArrayDesignData	arrayDesign
private int	blockNumber
private int	blockSizeX
private int	blockSizeY
private int	featureDiameter
private Set<FeatureData>	features
private int	metaGridX
private int	metaGridY
private int	originX
private int	originY
private int	spacingX
private int	spacingY

Constructor Summary

ArrayDesignBlockData()

Method Summary

ArrayDesignData	getArrayDesign() Used by Hibernate to link with ArrayDesign.
int	getBlockNumber() Get the block number of this block.
int	getBlockSizeX() Get the maximum number of rows in this block.
int	getBlockSizeY() Get the maximum number of columns in this block.
int	getFeatureDiameter() The expected diameter of spots.
(package private) Set<FeatureData>	getFeatures() Used by Hibernate to link with features.
int	getMetaGridX() Get the row coordinate of this block.
int	getMetaGridY() Get the column coordinate of this block.
int	getOriginX() Get the distance from the left edge of the slide to the top left spot in the block.
int	getOriginY() Get the distance from the top edge of the slide to the top left spot in the block.
int	getSpacingX() Get the x spacing.
int	getSpacingY() Get the y spacing.
void	setArrayDesign(ArrayDesignData arrayDesign)
void	setBlockNumber(int blockNumber)
void	setBlockSizeX(int rows)
void	setBlockSizeY(int columns)
void	setFeatureDiameter(int featureDiameter)
(package private) void	setFeatures(Set<FeatureData> features)
void	setMetaGridX(int metaRow)
void	setMetaGridY(int metaColumn)
void	setOriginX(int originX)
void	setOriginY(int originY)
void	setSpacingX(int spacingX)
void	setSpacingY(int spacingY)

Methods inherited from class net.sf.basedb.core.data.BasicData

equals, getId, getVersion, hashCode, setId, setVersion, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

metaGridX

private int metaGridX

metaGridY

private int metaGridY

blockSizeX

private int blockSizeX

blockSizeY

private int blockSizeY

originX

private int originX

originY

private int originY

spacingX

private int spacingX

spacingY

private int spacingY

featureDiameter

private int featureDiameter

blockNumber

private int blockNumber

features

private Set<FeatureData> features

arrayDesign

private ArrayDesignData arrayDesign

Constructor Detail

ArrayDesignBlockData

public ArrayDesignBlockData()

Method Detail

getMetaGridX

public int getMetaGridX()

Get the row coordinate of this block.

Hibernate: property

column="`meta_grid_x`" type="int" not-null="true" update="false"

setMetaGridX

public void setMetaGridX(int metaRow)

getMetaGridY

public int getMetaGridY()

Get the column coordinate of this block.

Hibernate: property

column="`meta_grid_y`" type="int" not-null="true" update="false"

setMetaGridY

public void setMetaGridY(int metaColumn)

getBlockSizeX

public int getBlockSizeX()

Get the maximum number of rows in this block.

Hibernate: property

column="`block_size_x`" type="int" not-null="true"

setBlockSizeX

public void setBlockSizeX(int rows)

getBlockSizeY

public int getBlockSizeY()

Get the maximum number of columns in this block.

Hibernate: property

column="`block_size_y`" type="int" not-null="true"

setBlockSizeY

public void setBlockSizeY(int columns)

getOriginX

public int getOriginX()

Get the distance from the left edge of the slide to the top left spot in the block.

Hibernate: property

column="`origin_x`" type="int" not-null="true"

setOriginX

public void setOriginX(int originX)

getOriginY

public int getOriginY()

Get the distance from the top edge of the slide to the top left spot in the block.

Hibernate: property

column="`origin_y`" type="int" not-null="true"

setOriginY

public void setOriginY(int originY)

getSpacingX

public int getSpacingX()

Get the x spacing.

Hibernate: property

column="`spacing_x`" type="int" not-null="true"

setSpacingX

public void setSpacingX(int spacingX)

getSpacingY

public int getSpacingY()

Get the y spacing.

Hibernate: property

column="`spacing_y`" type="int" not-null="true"

setSpacingY

public void setSpacingY(int spacingY)

getFeatureDiameter

public int getFeatureDiameter()

The expected diameter of spots.

Hibernate: property

column="`feature_diameter`" type="int" not-null="true"

setFeatureDiameter

public void setFeatureDiameter(int featureDiameter)

getBlockNumber

public int getBlockNumber()

Get the block number of this block.

Hibernate: property

column="`block_number`" type="int" not-null="true" update="false"

setBlockNumber

public void setBlockNumber(int blockNumber)

getFeatures

Set<FeatureData> getFeatures()

Used by Hibernate to link with features. This is the inverse end.

Hibernate: set

lazy="true" inverse="true" cascade="delete"

Hibernate: collection-key

column="`arraydesignblock_id`"

Hibernate: collection-one-to-many

class="net.sf.basedb.core.data.FeatureData"

setFeatures

void setFeatures(Set<FeatureData> features)

getArrayDesign

public ArrayDesignData getArrayDesign()

Used by Hibernate to link with ArrayDesign.

Hibernate: many-to-one

column="`arraydesign_id`" not-null="true" outer-join="false" update="false"

setArrayDesign

public void setArrayDesign(ArrayDesignData arrayDesign)