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java.lang.Object net.sf.basedb.core.data.BasicData net.sf.basedb.core.data.BioAssayData
public class BioAssayData
This class holds information about a bioassay.
BioAssay
,
Experiments and analysis overviewField Summary | |
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private AnnotationSetData |
annotationSet
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private BioAssaySetData |
bioAssaySet
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private Set<BioAssayData> |
children
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private DataCubeColumnData |
dataCubeColumn
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private String |
description
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private String |
name
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private int |
numFileSpots
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private int |
numSpots
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private Set<BioAssayData> |
parents
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private Set<RawBioAssayData> |
rawParents
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Fields inherited from interface net.sf.basedb.core.data.NameableData |
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MAX_DESCRIPTION_LENGTH, MAX_NAME_LENGTH |
Constructor Summary | |
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BioAssayData()
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Method Summary | |
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AnnotationSetData |
getAnnotationSet()
Get the annotation set that holds the annotations for an item. |
BioAssaySetData |
getBioAssaySet()
Get the bioassayset this bioassay belongs to. |
(package private) Set<BioAssayData> |
getChildren()
This is the inverse end to getParents() . |
DataCubeColumnData |
getDataCubeColumn()
Get the column this bioassay stores it's data in. |
String |
getDescription()
Get the description for the item. |
String |
getName()
Get the name of the item. |
int |
getNumFileSpots()
The number of unique spots in this bioassayset. |
int |
getNumSpots()
The number of unique spots in this bioassay. |
Set<BioAssayData> |
getParents()
Get a set that manages the parent bioassays the data in this bioassay is based on. |
Set<RawBioAssayData> |
getRawParents()
Get a set that manages the raw parent bioassays the data in this bioassay is based on. |
void |
setAnnotationSet(AnnotationSetData annotationSet)
Change the annotation set. |
void |
setBioAssaySet(BioAssaySetData bioAssaySet)
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(package private) void |
setChildren(Set<BioAssayData> children)
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void |
setDataCubeColumn(DataCubeColumnData dataCubeColumn)
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void |
setDescription(String description)
Set the description for the item. |
void |
setName(String name)
Set the name of the item. |
void |
setNumFileSpots(int numFileSpots)
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void |
setNumSpots(int numSpots)
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(package private) void |
setParents(Set<BioAssayData> parents)
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(package private) void |
setRawParents(Set<RawBioAssayData> rawParents)
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Methods inherited from class net.sf.basedb.core.data.BasicData |
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equals, getId, getVersion, hashCode, setId, setVersion, toString |
Methods inherited from class java.lang.Object |
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clone, finalize, getClass, notify, notifyAll, wait, wait, wait |
Methods inherited from interface net.sf.basedb.core.data.IdentifiableData |
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getId, getVersion |
Field Detail |
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private String name
private String description
private AnnotationSetData annotationSet
private BioAssaySetData bioAssaySet
private DataCubeColumnData dataCubeColumn
private int numSpots
private int numFileSpots
private Set<BioAssayData> parents
private Set<BioAssayData> children
private Set<RawBioAssayData> rawParents
Constructor Detail |
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public BioAssayData()
Method Detail |
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public String getName()
NameableData
getName
in interface NameableData
String
with the name of the itempublic void setName(String name)
NameableData
MAX_NAME_LENGTH
constant.
setName
in interface NameableData
name
- The new name for the itempublic String getDescription()
NameableData
getDescription
in interface NameableData
String
with a description of the itempublic void setDescription(String description)
NameableData
MAX_DESCRIPTION_LENGTH
constant.
setDescription
in interface NameableData
description
- The new description for the itempublic AnnotationSetData getAnnotationSet()
AnnotatableData
getAnnotationSet
in interface AnnotatableData
AnnotationSetData
item or null if no annotations existpublic void setAnnotationSet(AnnotationSetData annotationSet)
AnnotatableData
setAnnotationSet
in interface AnnotatableData
annotationSet
- Annotation set to change to.public BioAssaySetData getBioAssaySet()
public void setBioAssaySet(BioAssaySetData bioAssaySet)
public DataCubeColumnData getDataCubeColumn()
public void setDataCubeColumn(DataCubeColumnData dataCubeColumn)
public int getNumSpots()
public void setNumSpots(int numSpots)
public int getNumFileSpots()
public void setNumFileSpots(int numFileSpots)
public Set<BioAssayData> getParents()
void setParents(Set<BioAssayData> parents)
Set<BioAssayData> getChildren()
getParents()
.
void setChildren(Set<BioAssayData> children)
public Set<RawBioAssayData> getRawParents()
void setRawParents(Set<RawBioAssayData> rawParents)
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2.17.2: 2011-06-17 | ||||||||
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