net.sf.basedb.core.data
Class HybridizationData

java.lang.Object
  net.sf.basedb.core.data.BasicData
      net.sf.basedb.core.data.OwnedData
          net.sf.basedb.core.data.SharedData
              net.sf.basedb.core.data.CommonData
                  net.sf.basedb.core.data.AnnotatedData
                      net.sf.basedb.core.data.HybridizationData

All Implemented Interfaces:

AnnotatableData, IdentifiableData, LoggableData, NameableData, OwnableData, RemovableData, ShareableData

public class HybridizationData
extends AnnotatedData

This class holds information about an hybridization.

Version:

2.0

Author:

Nicklas

See Also:

Hybridization, Hybridzations and raw data overview

Last modified

$Date: 2009-10-08 10:46:51 +0200 (Thu, 08 Oct 2009) $

Hibernate: class

table="`Hybridizations`" lazy="true"

Field Summary

private ArraySlideData	arraySlide
private BioMaterialEventData	creationEvent
private int	numArrays
private Set<ScanData>	scans

Fields inherited from interface net.sf.basedb.core.data.NameableData

MAX_DESCRIPTION_LENGTH, MAX_NAME_LENGTH

Constructor Summary

HybridizationData()

Method Summary

ArraySlideData	getArraySlide() Get the array slide.
BioMaterialEventData	getCreationEvent() Get the event that created this hybidization.
int	getNumArrays() The number of arrays that was hybridized.
(package private) Set<ScanData>	getScans() This is the inverse end.
void	setArraySlide(ArraySlideData arraySlide)
(package private) void	setCreationEvent(BioMaterialEventData creationEvent)
void	setNumArrays(int numArrays)
(package private) void	setScans(Set<ScanData> scans)

Methods inherited from class net.sf.basedb.core.data.AnnotatedData

getAnnotationSet, setAnnotationSet

Methods inherited from class net.sf.basedb.core.data.CommonData

getDescription, getName, isRemoved, setDescription, setName, setRemoved

Methods inherited from class net.sf.basedb.core.data.SharedData

getItemKey, getProjectKey, setItemKey, setProjectKey

Methods inherited from class net.sf.basedb.core.data.OwnedData

getOwner, setOwner

Methods inherited from class net.sf.basedb.core.data.BasicData

equals, getId, getVersion, hashCode, setId, setVersion, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.sf.basedb.core.data.IdentifiableData

getId, getVersion

Methods inherited from interface net.sf.basedb.core.data.OwnableData

getOwner, setOwner

Field Detail

arraySlide

private ArraySlideData arraySlide

creationEvent

private BioMaterialEventData creationEvent

numArrays

private int numArrays

scans

private Set<ScanData> scans

Constructor Detail

HybridizationData

public HybridizationData()

Method Detail

getArraySlide

public ArraySlideData getArraySlide()

Get the array slide.

Hibernate: many-to-one

column="`arrayslide_id`" not-null="false" unique="true" outer-join="false"

setArraySlide

public void setArraySlide(ArraySlideData arraySlide)

getCreationEvent

public BioMaterialEventData getCreationEvent()

Get the event that created this hybidization. Mapping is defined in hibernate-properties-HybridizationData.xml since XDoclet cannot generate it.

setCreationEvent

void setCreationEvent(BioMaterialEventData creationEvent)

getNumArrays

public int getNumArrays()

The number of arrays that was hybridized. Shold be <= ArrayDesign.numArrays

Since:

2.6

Hibernate: property

column="`num_arrays`" type="int" not-null="true"

setNumArrays

public void setNumArrays(int numArrays)

getScans

Set<ScanData> getScans()

This is the inverse end.

See Also:

ScanData.getHybridization()

Hibernate: set

lazy="true" inverse="true"

Hibernate: collection-key

column="`hybridization_id`"

Hibernate: collection-one-to-many

class="net.sf.basedb.core.data.ScanData"

setScans

void setScans(Set<ScanData> scans)