Hierarchy For Package net.sf.basedb.plugins

Package Hierarchies:

All Packages

Class Hierarchy

• java.lang.Object
  • net.sf.basedb.core.plugin.AbstractPlugin (implements net.sf.basedb.core.plugin.Plugin)
    • net.sf.basedb.core.plugin.AbstractAnalysisPlugin
      • net.sf.basedb.plugins.Base1PluginExecuter (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.FormulaFilter (implements net.sf.basedb.core.plugin.AnalysisFilterPlugin, net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.JepExtraValueCalculator (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.JepIntensityTransformer (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.LowessNormalization (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.ManualTransformCreator (implements net.sf.basedb.core.plugin.AnnotationSetterPlugin, net.sf.basedb.core.plugin.InteractivePlugin)
      • net.sf.basedb.plugins.MedianRatioNormalization (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
    • net.sf.basedb.core.plugin.AbstractExporterPlugin (implements net.sf.basedb.core.plugin.ImmediateDownloadExporter)
      • net.sf.basedb.plugins.BaseFileExporterPlugin (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.BioAssaySetExporter (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.GalExporter (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.HelpExporter (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.PackedFileExporter (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.PlateMappingExporter (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.PluginConfigurationExporter (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
    • net.sf.basedb.util.zip.AbstractFileUnpacker (implements net.sf.basedb.util.zip.FileUnpacker, net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.TarFileUnpacker
      • net.sf.basedb.plugins.ZipFileUnpacker
    • net.sf.basedb.plugins.AbstractFlatFileImporter (implements net.sf.basedb.core.plugin.AutoDetectingImporter, net.sf.basedb.core.signal.SignalTarget)
      • net.sf.basedb.plugins.AnnotationFlatFileImporter (implements net.sf.basedb.util.parser.ConfigureByExample, net.sf.basedb.core.plugin.InteractivePlugin)
      • net.sf.basedb.plugins.IlluminaRawDataImporter (implements net.sf.basedb.core.plugin.InteractivePlugin)
      • net.sf.basedb.plugins.PlateFlatFileImporter (implements net.sf.basedb.util.parser.ConfigureByExample, net.sf.basedb.core.plugin.InteractivePlugin)
      • net.sf.basedb.plugins.PlateMappingImporter (implements net.sf.basedb.core.plugin.InteractivePlugin)
      • net.sf.basedb.plugins.PrintMapFlatFileImporter (implements net.sf.basedb.core.plugin.InteractivePlugin)
      • net.sf.basedb.plugins.RawDataFlatFileImporter (implements net.sf.basedb.core.plugin.AnnotationSetterPlugin, net.sf.basedb.util.parser.ConfigureByExample, net.sf.basedb.core.plugin.InteractivePlugin)
      • net.sf.basedb.plugins.ReporterFlatFileImporter (implements net.sf.basedb.util.parser.ConfigureByExample, net.sf.basedb.core.plugin.InteractivePlugin)
      • net.sf.basedb.plugins.ReporterMapFlatFileImporter (implements net.sf.basedb.util.parser.ConfigureByExample, net.sf.basedb.core.plugin.InteractivePlugin)
    • net.sf.basedb.plugins.BfsExporterPlugin (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
    • net.sf.basedb.plugins.CdfFileReporterImporter (implements net.sf.basedb.core.plugin.AutoDetectingImporter, net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
    • net.sf.basedb.plugins.HelpImporter (implements net.sf.basedb.core.plugin.AutoDetectingImporter, net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
    • net.sf.basedb.plugins.IntensityCalculatorPlugin (implements net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
    • net.sf.basedb.plugins.PluginConfigurationImporter (implements net.sf.basedb.core.plugin.AutoDetectingImporter, net.sf.basedb.core.plugin.InteractivePlugin, net.sf.basedb.core.signal.SignalTarget)
    • net.sf.basedb.plugins.SpotImageCreator (implements net.sf.basedb.core.plugin.Plugin, net.sf.basedb.core.signal.SignalTarget)
  • net.sf.basedb.plugins.AnnotationFlatFileImporter.AnnotationValue
  • net.sf.basedb.plugins.AnnotationFlatFileImporter.NewAnnotations
  • net.sf.basedb.plugins.Base1PluginExecuter.JobParameter
  • net.sf.basedb.plugins.BaseFileExporterPlugin.ExtendedDynamicField (implements net.sf.basedb.util.export.spotdata.DynamicField)
  • net.sf.basedb.plugins.BfsExporterPlugin.ExtendedExportableField
  • net.sf.basedb.plugins.BioAssaySetExporter.QueryItem
  • net.sf.basedb.plugins.BioAssaySetExporter.QueryItemTitleComparator (implements java.util.Comparator<T>, java.io.Serializable)
  • net.sf.basedb.plugins.IlluminaRawDataImporter.BatchAndMapHolder
  • net.sf.basedb.plugins.LowessNormalization.CallableWorker (implements java.util.concurrent.Callable<V>)
  • net.sf.basedb.plugins.LowessNormalization.SpotData (implements java.lang.Comparable<T>)
  • net.sf.basedb.plugins.MedianRatioNormalization.SpotData (implements java.lang.Comparable<T>)
  • net.sf.basedb.plugins.PrintMapFlatFileImporter.MetaBlock
  • net.sf.basedb.plugins.RawDataFlatFileImporter.FileIterator (implements java.util.Iterator<E>)

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • net.sf.basedb.plugins.Base1PluginExecuter.Base1JobParameterType
    • net.sf.basedb.plugins.PrintMapFlatFileImporter.Section
    • net.sf.basedb.plugins.PrintMapFlatFileImporter.FormatType