Serialized Form

Package net.sf.basedb.clients.web

Class net.sf.basedb.clients.web.DuplicateWizardException extends RuntimeException implements Serializable

serialVersionUID: 8663167575860015142L

Class net.sf.basedb.clients.web.WebException extends Exception implements Serializable

serialVersionUID: 8401139016420733632L

Serialized Fields

title

String title

The title of the error message.

detail

String detail

A more detailed description of the error message.

pageType

String pageType

The type of page to display the error message in.

Package net.sf.basedb.clients.web.fileupload

Class net.sf.basedb.clients.web.fileupload.UploadAbortedException extends IOException implements Serializable

serialVersionUID: 5207696297213600544L

Package net.sf.basedb.clients.web.servlet

Class net.sf.basedb.clients.web.servlet.CompileAll extends HttpServlet implements Serializable

serialVersionUID: 5908370094706141413L

Class net.sf.basedb.clients.web.servlet.Download extends HttpServlet implements Serializable

serialVersionUID: 6893272087926809158L

Serialized Fields

defaultMimeType

String defaultMimeType

forceMimeType

String forceMimeType

download

boolean download

usePathInfo

boolean usePathInfo

Class net.sf.basedb.clients.web.servlet.ExperimentExplorerPlotServlet extends HttpServlet implements Serializable

serialVersionUID: -445763412868957935L

Serialized Fields

maxWidth

int maxWidth

maxHeight

int maxHeight

defaultWidth

int defaultWidth

defaultHeight

int defaultHeight

defaultFormat

String defaultFormat

Class net.sf.basedb.clients.web.servlet.ExtensionsServlet extends HttpServlet implements Serializable

serialVersionUID: 338904698493055683L

Class net.sf.basedb.clients.web.servlet.PlotServlet extends HttpServlet implements Serializable

serialVersionUID: 80128526417552573L

Serialized Fields

maxWidth

int maxWidth

maxHeight

int maxHeight

defaultWidth

int defaultWidth

defaultHeight

int defaultHeight

defaultFormat

String defaultFormat

cacheBase

String cacheBase

Class net.sf.basedb.clients.web.servlet.RssNewsFeed extends HttpServlet implements Serializable

serialVersionUID: -4097480516166797186L

Serialized Fields

host

String host

contextPath

String contextPath

utf8

Charset utf8

sc

SessionControl sc

cachedRssNews

byte[] cachedRssNews

Class net.sf.basedb.clients.web.servlet.StartStopServlet extends HttpServlet implements Serializable

serialVersionUID: 8267932757094628788L

Class net.sf.basedb.clients.web.servlet.Upload extends HttpServlet implements Serializable

serialVersionUID: 1404104707477507003L

Class net.sf.basedb.clients.web.servlet.ViewSpotImage extends HttpServlet implements Serializable

serialVersionUID: 4627395145185119139L

Package net.sf.basedb.clients.web.taglib

Class net.sf.basedb.clients.web.taglib.Body extends TagSupport implements Serializable

serialVersionUID: 6814973550614834311L

Serialized Fields

page

Page page

The parent <base:page> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

onLoad

String onLoad

A JavaScript statement that is put into the onload attribute of the body tag.

onUnload

String onUnload

A JavaScript statement that is put into the onunload attribute of the body tag.

onKeyPress

String onKeyPress

A JavaScript statement that is put into the onkeypress attribute of the body tag.

attributes

String attributes

Any other attributes that is needed in the body tag.

Class net.sf.basedb.clients.web.taglib.Button extends TagSupport implements Serializable

serialVersionUID: 2058163945669701874L

Serialized Fields

buttonGroup

ButtonGroup buttonGroup

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

onClick

String onClick

JavaScript statement.

title

String title

The title of the button.

tooltip

String tooltip

An optional tooltip.

visible

boolean visible

If the button should be visible or not.

disabled

boolean disabled

If the button should be enabled or not.

image

String image

The image to display.

Class net.sf.basedb.clients.web.taglib.ButtonGroup extends TagSupport implements Serializable

serialVersionUID: -8808469470232672680L

Serialized Fields

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

align

String align

Optional align attribute

buttons

List<E> buttons

The buttons in this group.

Class net.sf.basedb.clients.web.taglib.ExceptionCatcher extends BodyTagSupport implements Serializable

serialVersionUID: -5694802936612085039L

Serialized Fields

clazz

String clazz

Class net.sf.basedb.clients.web.taglib.Head extends TagSupport implements Serializable

serialVersionUID: 948719986796860767L

Serialized Fields

page

Page page

The parent <base:page> tag.

styles

String styles

A comma-separated list of stylesheets filenames.

scripts

String scripts

A comma-separated list of JavaScript filenames.

Class net.sf.basedb.clients.web.taglib.Help extends TagSupport implements Serializable

serialVersionUID: -2754197259139443681L

Serialized Fields

page

Page page

The parent <base:page> tag.

helpid

String helpid

The keyword of the helptopic

tabcontrol

String tabcontrol

The tabcontrol ID to get the help id from.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

image

String image

The path to the help icon

tooltip

String tooltip

Optional tooltip.

onClick

String onClick

Optional JavaScript statement.

visible

boolean visible

If the help icon should be visible or not.

Class net.sf.basedb.clients.web.taglib.HideableSection extends TagSupport implements Serializable

serialVersionUID: 4750788983708350436L

Serialized Fields

page

Page page

The parent <base:page> tag.

clazz

String clazz

Optional class attribute

showClass

String showClass

hideClass

String hideClass

style

String style

Optional style attribute

contentStyle

String contentStyle

Optional style attribute for the content section

title

String title

The title of the section.

visible

boolean visible

If the section should be visible or not.

onToggle

String onToggle

Javascript to call when showing/hiding section

showInitially

boolean showInitially

If the section should be shown or hidden to start with.

Class net.sf.basedb.clients.web.taglib.Icon extends TagSupport implements Serializable

serialVersionUID: 6886281373891822996L

Serialized Fields

page

Page page

The parent <base:page> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

image

String image

The filename of the image.

tooltip

String tooltip

An optional tooltip.

onClick

String onClick

An optional JavaScript statement.

visible

boolean visible

If the icon should be visible or not.

Class net.sf.basedb.clients.web.taglib.Note extends TagSupport implements Serializable

serialVersionUID: 7490498743887372136L

Serialized Fields

page

Page page

The parent <base:page> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

messageStyle

String messageStyle

Optional style attribute for the message section

type

int type

The type of note.

title

String title

The title of the note.

icon

String icon

The filename of an optional icon that should be displayed with the error message.

visible

boolean visible

If the note should be visible or not.

Class net.sf.basedb.clients.web.taglib.Page extends TagSupport implements Serializable

serialVersionUID: -5693587214280114326L

Serialized Fields

title

String title

The title of the page.

menu

String menu

The name of the menu that should be displayed on the current page. This setting is only used if the type is PAGE_TYPE_DEFAULT

type

int type

The type of the current page.

Class net.sf.basedb.clients.web.taglib.PropertyValue extends TagSupport implements Serializable

serialVersionUID: -92637960053523649L

Serialized Fields

property

String property

The name of the property.

enablePropertyLink

boolean enablePropertyLink

A link to the property item or not.

enableDownloadLink

boolean enableDownloadLink

Use for files only, if the view/download link should be enabled or not.

tooltip

String tooltip

An optional tooltip.

enableEditLink

boolean enableEditLink

Possible to open an edit popup or not with the linked property

nullText

String nullText

What to show if the value is null.

ROOT

String ROOT

Class net.sf.basedb.clients.web.taglib.Select extends TagSupport implements Serializable

serialVersionUID: -9096279950931870965L

Serialized Fields

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

required

boolean required

If a value is required or not.

denied

boolean denied

If the logged in user was denied access to the current item.

selectRecent

boolean selectRecent

If we can select the most recently used item for new items with nu current item.

selectdefault

boolean selectdefault

If the default item should be selected for new items with no current or recently used items.

onChange

String onChange

JavaScript statement.

onSelect

String onSelect

JavaScript statement.

newItem

boolean newItem

If the link is from a new item or an old item.

visible

boolean visible

If the select list should be visible or not.

disabled

boolean disabled

If the selection list should be enabled or not.

unselectedText

String unselectedText

Text to display that for the "unselected" option

tryGetDirectoryPath

boolean tryGetDirectoryPath

Package net.sf.basedb.clients.web.taglib.extensions

Class net.sf.basedb.clients.web.taglib.extensions.Render extends TagSupport implements Serializable

serialVersionUID: -788121059344311519L

Serialization Methods

readObject

private void readObject(ObjectInputStream ois)
                 throws ClassNotFoundException,
                        IOException

Throws:

ClassNotFoundException

IOException

writeObject

private void writeObject(ObjectOutputStream ois)
                  throws IOException

Throws:

IOException

Serialized Fields

context

JspContext context

extensions

ExtensionsInvoker<A extends Action> extensions

item

Object item

renderer

Renderer<A extends Action> renderer

wrapper

WrappingRenderer<A extends Action> wrapper

Class net.sf.basedb.clients.web.taglib.extensions.Scripts extends TagSupport implements Serializable

serialVersionUID: -2867817254135934000L

Serialization Methods

readObject

private void readObject(ObjectInputStream ois)
                 throws ClassNotFoundException,
                        IOException

Throws:

ClassNotFoundException

IOException

writeObject

private void writeObject(ObjectOutputStream ois)
                  throws IOException

Throws:

IOException

Serialized Fields

context

JspContext context

Class net.sf.basedb.clients.web.taglib.extensions.Stylesheets extends TagSupport implements Serializable

serialVersionUID: -3549659176356969880L

Serialization Methods

readObject

private void readObject(ObjectInputStream ois)
                 throws ClassNotFoundException,
                        IOException

Throws:

ClassNotFoundException

IOException

writeObject

private void writeObject(ObjectOutputStream ois)
                  throws IOException

Throws:

IOException

Serialized Fields

context

JspContext context

Package net.sf.basedb.clients.web.taglib.menu

Class net.sf.basedb.clients.web.taglib.menu.Menu extends TagSupport implements Serializable

Serialized Fields

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

type

String type

If it is a vertical or horizontal menu.

open

String open

If submenus opens as soon as the mouse enters or a click is required.

fillText

String fillText

Optional text to display to the far right of a horizontal menu

Class net.sf.basedb.clients.web.taglib.menu.Menuitem extends TagSupport implements Serializable

serialVersionUID: 1431778959423572670L

Serialized Fields

menu

Menu menu

The parent Menu.

style

String style

Optional style attribute

title

String title

The title of the menu item.

onclick

String onclick

Javascript statment to execute when the user clicks the menu.

tooltip

String tooltip

A tooltip explaining the menu item.

enabled

boolean enabled

If the menu item is enabled.

visible

boolean visible

If the menu item is visible.

icon

String icon

An icon to display.

iconAbsolute

boolean iconAbsolute

Class net.sf.basedb.clients.web.taglib.menu.Menuseparator extends TagSupport implements Serializable

serialVersionUID: -1758168104130104042L

Serialized Fields

menu

Menu menu

style

String style

Optional style attribute

visible

boolean visible

If the separator is visible.

Class net.sf.basedb.clients.web.taglib.menu.Submenu extends TagSupport implements Serializable

serialVersionUID: -9170636903520137656L

Serialized Fields

menu

Menu menu

The parent Menu.

style

String style

Optional style attribute

title

String title

The title of the menu item.

subId

String subId

The ID of the submenu.

tooltip

String tooltip

A tooltip explaining the menu item.

enabled

boolean enabled

If the menu item is enabled.

visible

boolean visible

If the menu item is visible.

icon

String icon

An icon to display.

iconAbsolute

boolean iconAbsolute

Package net.sf.basedb.clients.web.taglib.path

Class net.sf.basedb.clients.web.taglib.path.Path extends TagSupport implements Serializable

serialVersionUID: 6315346458189900215L

Serialized Fields

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

numElements

int numElements

Keeps track of the number of path elements so separators can be added.

separator

String separator

Class net.sf.basedb.clients.web.taglib.path.PathElement extends TagSupport implements Serializable

serialVersionUID: 3580594490341605165L

Serialized Fields

path

Path path

The parent Path.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

title

String title

The title of the menu item.

href

String href

URL to the linked page.

tooltip

String tooltip

A tooltip explaining the link.

visible

boolean visible

enabled

boolean enabled

Package net.sf.basedb.clients.web.taglib.tab

Class net.sf.basedb.clients.web.taglib.tab.Tab extends BodyTagSupport implements Serializable

serialVersionUID: -2308568821797105775L

Serialized Fields

tc

TabControl tc

The parent TabControl object.

clazz

String clazz

Optional class attribute.

Since:

2.17

style

String style

Optional style attribute

title

String title

The title of the tab.

tooltip

String tooltip

A popup tooltip text.

validate

String validate

A JavaScript method that validates the tab content.

activate

String activate

A JavaScript method that is invoked when activating the tab.

visible

boolean visible

If the tab should be visible or not.

helpid

String helpid

The help ID for this tab.

Class net.sf.basedb.clients.web.taglib.tab.TabControl extends TagSupport implements Serializable

serialVersionUID: 1898616270560551262L

Serialized Fields

clazz

String clazz

Optional class attribute.

Since:

2.17

style

String style

Optional style attribute

contentStyle

String contentStyle

Optional style attribute for the content section

width

String width

The width of the tab control.

active

String active

The ID attribute of the active tab.

switchtab

String switchtab

The JavaScript method to call to change tabs.

position

int position

The position of the tabs.

remember

boolean remember

If it should try to remember the last active tab on the page

autoAdjustHeight

boolean autoAdjustHeight

If tab height should be automatically adjusted or not.

noTabs

boolean noTabs

If the tabs should be displayed or not.

extensions

ExtensionsInvoker<A extends Action> extensions

startActive

String startActive

The real ID of the tab that is initially active.

numTabs

int numTabs

The number of tabs.

tabs

StringBuilder tabs

The HTML for the tabs.

content

StringBuilder content

The HTML for the contents of the tabs.

script

StringBuilder script

JavaScript for initialising the tabcontrol

Package net.sf.basedb.clients.web.taglib.table

Class net.sf.basedb.clients.web.taglib.table.Button extends TagSupport implements Serializable

serialVersionUID: -6294795199053088632L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

toolbar

Toolbar toolbar

The parent <tbl:toolbar> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

image

String image

An optional image to show in the button.

imageAlign

String imageAlign

LEFT or RIGTH;

onClick

String onClick

A JavaScript statement that is executet when the button is clicked.

title

String title

An optional title text on the button.

tooltip

String tooltip

An optional tooltip that will show when the mouse is over the button.

disabled

boolean disabled

IF the button is disabled or not.

visible

boolean visible

If the button should be visible or not.

Class net.sf.basedb.clients.web.taglib.table.Cell extends BodyTagSupport implements Serializable

serialVersionUID: -1992298892993613884L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

clazz

String clazz

Optional class attribute

errorClazz

String errorClazz

Optional class attribute for errors.

style

String style

Optional style attribute

columnId

String columnId

The ID of the column to which this cell belongs.

visible

boolean visible

If the cell should be visible or not.

isHidden

boolean isHidden

maxCharacters

int maxCharacters

autoShow

boolean autoShow

maxHeight

String maxHeight

maxWidth

String maxWidth

Class net.sf.basedb.clients.web.taglib.table.CellValue extends TagSupport implements Serializable

serialVersionUID: 4068184541728474047L

Serialized Fields

value

Object value

The value to display.

list

Iterable<T> list

prefix

String prefix

suffix

String suffix

separator

String separator

Class net.sf.basedb.clients.web.taglib.table.ColumnDef extends TagSupport implements Serializable

serialVersionUID: -272408513116029365L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

property

String property

The name of the property on the item class.

isCollection

boolean isCollection

If the property is a collection or not.

isAnnotation

boolean isAnnotation

If the property is an annotation or not.

sortProperty

String sortProperty

Optional property used for sorting.

filterProperty

String filterProperty

Optional property used for filtering.

exportProperty

String exportProperty

Optional property used for exporting.

dataType

String dataType

The type of data in the property.

title

String title

The title of the column.

show

String show

If the column should be visible or not. Valid values are: always, never, auto

sortable

boolean sortable

If the column is sortable or not

filterable

boolean filterable

If the column is filterable or not

exportable

boolean exportable

If the column is exportable or not

tooltip

String tooltip

A tooltip with explaining text.

jsEnum

String jsEnum

Options for enum.

enumeration

Enumeration<K,V> enumeration

smartEnum

boolean smartEnum

multiple

boolean multiple

Class net.sf.basedb.clients.web.taglib.table.Columns extends TagSupport implements Serializable

serialVersionUID: 8857257637171219032L

Serialized Fields

table

Table table

data

Data data

Class net.sf.basedb.clients.web.taglib.table.Data extends TagSupport implements Serializable

serialVersionUID: 6633768910320305875L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

Class net.sf.basedb.clients.web.taglib.table.Form extends TagSupport implements Serializable

serialVersionUID: -6667213780186530313L

Serialized Fields

table

Table table

headers

Map<K,V> headers

width

int width

Class net.sf.basedb.clients.web.taglib.table.Header extends TagSupport implements Serializable

serialVersionUID: -7541520513764712983L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

visible

boolean visible

If the header should be visible or not.

Class net.sf.basedb.clients.web.taglib.table.Hidden extends TagSupport implements Serializable

serialVersionUID: -2708187720621346925L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

name

String name

The name of the element.

value

String value

The value of the element.

skip

boolean skip

If the hidden element should be included or not.

Class net.sf.basedb.clients.web.taglib.table.Label extends TagSupport implements Serializable

serialVersionUID: 5326481772609709567L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

toolbar

Toolbar toolbar

The parent <tbl:toolbar> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

image

String image

An optional image to show in the button.

title

String title

An optional title text on the button.

tooltip

String tooltip

An optional tooltip that will show when the mouse is over the button.

visible

boolean visible

If the button should be visible or not.

Class net.sf.basedb.clients.web.taglib.table.Navigator extends TagSupport implements Serializable

serialVersionUID: 3287798191943288674L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

currentPage

int currentPage

The current page.

rowsPerPage

int rowsPerPage

The number of rows to display on a single page.

totalRows

int totalRows

The total number of rows.

visible

boolean visible

If the navigator bar should be visible or not.

locked

boolean locked

Class net.sf.basedb.clients.web.taglib.table.Panel extends TagSupport implements Serializable

serialVersionUID: 8435173953529878997L

Serialized Fields

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

visible

boolean visible

If the panel should be visible or not.

Class net.sf.basedb.clients.web.taglib.table.PresetSelector extends TagSupport implements Serializable

serialVersionUID: 6787200020881710014L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

clazz

String clazz

Optional class attribute

colspan

String colspan

Optional colspan attribute

style

String style

Optional style attribute

visible

boolean visible

If the preset selector should be visible or not.

disableRemoved

boolean disableRemoved

If the 'removed' option should be included in the preset selector or not. If the list contains items that are not removable, the option is never included.

disableOwnedBy

boolean disableOwnedBy

If the 'owned by me' option should be included in the preset selector or not. If the list contains items that are not ownable, the option is never included.

disableSharedTo

boolean disableSharedTo

If the 'shared to me' option should be included in the preset selector or not. If the list contains items that are not shareable, the option is never included.

disableInProject

boolean disableInProject

If the 'in project' option should be included in the preset selector or not. If the list contains items that are not removable, the option is never included.

disableOthers

boolean disableOthers

If the 'owned by others' option should be included in the preset selector or not. If the list contains items that are not ownable, the option is never included.

onChange

String onChange

Class net.sf.basedb.clients.web.taglib.table.PropertyFilter extends TagSupport implements Serializable

serialVersionUID: -1007580995461268459L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

Class net.sf.basedb.clients.web.taglib.table.Row extends TagSupport implements Serializable

serialVersionUID: 1975591924471893645L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

data

Data data

The parent <tbl:data> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

highlight

String highlight

Optional class attribute that is applied when the mouse is over the current row.

visible

boolean visible

If the row should be visible or not.

Class net.sf.basedb.clients.web.taglib.table.Rows extends TagSupport implements Serializable

serialVersionUID: 2099882746242865479L

Serialized Fields

table

Table table

data

Data data

Class net.sf.basedb.clients.web.taglib.table.Table extends TagSupport implements Serializable

serialVersionUID: -6717117667917148241L

Serialized Fields

page

Page page

The parent <base:page> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

title

String title

An optional title of the table.

sortby

String sortby

The column to sort by. Should match the sort attribute on the column tag.

sortbyMultiple

Set<E> sortbyMultiple

action

String action

itemType

Item itemType

subcontext

String subcontext

sortDirection

ItemContext.SortDirection sortDirection

ASC or DESC

columns

String columns

Which columns that should be visible and their order

hiddenForm

StringBuilder hiddenForm

script

StringBuilder script

evenodd

int evenodd

Keep track of which class to use for the next row.

allVisible

boolean allVisible

"all" was specified for the columns attribute.

visibleColumns

LinkedHashSet<E> visibleColumns

The ID of all visible columns, sorted by the order they should appear.

columnContent

Map<K,V> columnContent

columnFilter

Map<K,V> columnFilter

hiddenFilteredColumns

List<E> hiddenFilteredColumns

numHeaderColumns

int numHeaderColumns

numFilteredColumns

int numFilteredColumns

Class net.sf.basedb.clients.web.taglib.table.Toolbar extends TagSupport implements Serializable

serialVersionUID: -8719987407920036604L

Serialized Fields

table

Table table

The parent <tbl:table> tag.

clazz

String clazz

Optional class attribute

style

String style

Optional style attribute

visible

boolean visible

If the toolbar should be visible or not.

hasImages

boolean hasImages

If buttons should display images.

hasText

boolean hasText

If buttons should display text.

Package net.sf.basedb.core

Class net.sf.basedb.core.AccountExpiredException extends PermissionDeniedException implements Serializable

serialVersionUID: 3521477904486961158L

Class net.sf.basedb.core.AlreadyLoggedInException extends PermissionDeniedException implements Serializable

serialVersionUID: 3492139536509366378L

Class net.sf.basedb.core.BaseException extends RuntimeException implements Serializable

serialVersionUID: -3336541323718932298L

Class net.sf.basedb.core.ConfigurationException extends BaseException implements Serializable

serialVersionUID: -4529759727198656159L

Class net.sf.basedb.core.ConnectionClosedException extends BaseException implements Serializable

serialVersionUID: -724179591893028717L

Class net.sf.basedb.core.DatabaseException extends BaseException implements Serializable

serialVersionUID: -8341857688856615743L

Class net.sf.basedb.core.DateFormatException extends InvalidDataException implements Serializable

serialVersionUID: -4312755232208681515L

Class net.sf.basedb.core.DetachedItemException extends BaseException implements Serializable

serialVersionUID: 4694041774316355349L

Class net.sf.basedb.core.DisallowedValueException extends InvalidDataException implements Serializable

serialVersionUID: 1332642295480924999L

Class net.sf.basedb.core.InvalidAnnotationException extends InvalidDataException implements Serializable

serialVersionUID: -3711446965517938282L

Class net.sf.basedb.core.InvalidDataException extends BaseException implements Serializable

serialVersionUID: -7183580873652712069L

Class net.sf.basedb.core.InvalidPasswordException extends BaseException implements Serializable

serialVersionUID: -7696617448870042174L

Class net.sf.basedb.core.InvalidPathException extends InvalidDataException implements Serializable

serialVersionUID: 7033749590246898005L

Class net.sf.basedb.core.InvalidRelationException extends BaseException implements Serializable

serialVersionUID: -7837408790194110261L

Class net.sf.basedb.core.InvalidUseOfNullException extends InvalidDataException implements Serializable

serialVersionUID: -5438951825783349420L

Class net.sf.basedb.core.ItemAlreadyExistsException extends InvalidDataException implements Serializable

serialVersionUID: 8355317881537705674L

Class net.sf.basedb.core.ItemInUseException extends PermissionDeniedException implements Serializable

serialVersionUID: 8687133796504091488L

Class net.sf.basedb.core.ItemModifiedException extends PermissionDeniedException implements Serializable

serialVersionUID: 6443430913361934576L

Class net.sf.basedb.core.ItemNotFoundException extends InvalidDataException implements Serializable

serialVersionUID: -4554252030783275058L

Class net.sf.basedb.core.NotLoggedInException extends PermissionDeniedException implements Serializable

serialVersionUID: 5892928408034076760L

Class net.sf.basedb.core.NumberOutOfRangeException extends InvalidDataException implements Serializable

serialVersionUID: 5912381046544116726L

Class net.sf.basedb.core.ParameterException extends InvalidDataException implements Serializable

serialVersionUID: 5726803477665248712L

Class net.sf.basedb.core.PermissionDeniedException extends BaseException implements Serializable

serialVersionUID: 736019555576108955L

Class net.sf.basedb.core.QuotaException extends InvalidDataException implements Serializable

serialVersionUID: 4279045703338054258L

Class net.sf.basedb.core.StringTooLongException extends InvalidDataException implements Serializable

serialVersionUID: 241736463987555060L

Class net.sf.basedb.core.UnmodifiableResultList extends ArrayList<T> implements Serializable

serialVersionUID: -1514212917126590560L

Serialized Fields

totalCount

long totalCount

Class net.sf.basedb.core.UnsavedItemException extends InvalidDataException implements Serializable

serialVersionUID: 9092496684529135233L

Class net.sf.basedb.core.UnsupportedFileFormatException extends InvalidDataException implements Serializable

serialVersionUID: -6974393471798478411L

Package net.sf.basedb.core.authentication

Class net.sf.basedb.core.authentication.AuthenticationException extends Exception implements Serializable

serialVersionUID: 4258462779202665788L

Class net.sf.basedb.core.authentication.InvalidPasswordException extends AuthenticationException implements Serializable

serialVersionUID: 6007471910116426466L

Class net.sf.basedb.core.authentication.UnknownLoginException extends AuthenticationException implements Serializable

serialVersionUID: 2869436058103572464L

Package net.sf.basedb.core.data

Class net.sf.basedb.core.data.ContextIndex extends Object implements Serializable

serialVersionUID: -30654936444512825L

Serialization Methods

readObject

private void readObject(ObjectInputStream ois)
                 throws ClassNotFoundException,
                        IOException

Throws:

ClassNotFoundException

IOException

writeObject

private void writeObject(ObjectOutputStream ois)
                  throws IOException

Throws:

IOException

Serialized Fields

itemType

int itemType

subContext

String subContext

name

String name

Class net.sf.basedb.core.data.FileTypeIndex extends Object implements Serializable

serialVersionUID: 5213031457561980770L

Serialization Methods

readObject

private void readObject(ObjectInputStream ois)
                 throws ClassNotFoundException,
                        IOException

Throws:

ClassNotFoundException

IOException

writeObject

private void writeObject(ObjectOutputStream ois)
                  throws IOException

Throws:

IOException

Class net.sf.basedb.core.data.GuiContextData extends Object implements Serializable

serialVersionUID: 8098514351740554692L

Serialized Fields

itemType

int itemType

contextType

int contextType

Class net.sf.basedb.core.data.MappingCoordinate extends Object implements Serializable

serialVersionUID: -142540401347259827L

Serialized Fields

plate

int plate

The plate number.

row

int row

The row number.

column

int column

The column number.

Class net.sf.basedb.core.data.PlateCoordinate extends Object implements Serializable

serialVersionUID: -7499789811217707905L

Serialized Fields

row

int row

The row number.

column

int column

The column number.

Class net.sf.basedb.core.data.QuotaIndex extends Object implements Serializable

serialVersionUID: 4679331005994321116L

Serialization Methods

readObject

private void readObject(ObjectInputStream ois)
                 throws ClassNotFoundException,
                        IOException

Throws:

ClassNotFoundException

IOException

writeObject

private void writeObject(ObjectOutputStream ois)
                  throws IOException

Throws:

IOException

Serialized Fields

location

int location

Class net.sf.basedb.core.data.ReporterListScoreData extends Object implements Serializable

serialVersionUID: 4579749871479306251L

Serialization Methods

readObject

private void readObject(ObjectInputStream ois)
                 throws ClassNotFoundException,
                        IOException

Throws:

ClassNotFoundException

IOException

writeObject

private void writeObject(ObjectOutputStream ois)
                  throws IOException

Throws:

IOException

Serialized Fields

reporterId

int reporterId

score

Float score

Class net.sf.basedb.core.data.UsedQuantity extends Object implements Serializable

serialVersionUID: -2938528453996490494L

Serialized Fields

usedQuantity

Float usedQuantity

The used quantity value.

sourceGroup

int sourceGroup

Class net.sf.basedb.core.data.VersionedParameter extends Object implements Serializable

serialVersionUID: 840111442332381385L

Serialized Fields

name

String name

The name of the parameter.

version

int version

The version of the parameter.

Package net.sf.basedb.core.data.keyring

Class net.sf.basedb.core.data.keyring.GroupGroups extends Object implements Serializable

serialVersionUID: 3058557529392800869L

Serialized Fields

parentId

int parentId

childId

int childId

Class net.sf.basedb.core.data.keyring.GroupKeys extends KeyPermission implements Serializable

serialVersionUID: 3951186057137611850L

Serialized Fields

groupId

int groupId

Class net.sf.basedb.core.data.keyring.GroupProjects extends ProjectPermission implements Serializable

serialVersionUID: -7931224932031764513L

Serialized Fields

groupId

int groupId

Class net.sf.basedb.core.data.keyring.PluginKeys extends Object implements Serializable

serialVersionUID: -8514403856902670522L

Serialized Fields

pluginDefinitionId

int pluginDefinitionId

keyId

int keyId

granted

int granted

denied

int denied

Class net.sf.basedb.core.data.keyring.ProjectKeys extends KeyPermission implements Serializable

serialVersionUID: 3491327528105067768L

Serialized Fields

projectId

int projectId

Class net.sf.basedb.core.data.keyring.RoleKeys extends KeyPermission implements Serializable

serialVersionUID: -2640304357731797636L

Serialized Fields

roleId

int roleId

Class net.sf.basedb.core.data.keyring.UserGroups extends Object implements Serializable

serialVersionUID: -3481737087412081175L

Serialized Fields

userId

int userId

groupId

int groupId

Class net.sf.basedb.core.data.keyring.UserKeys extends KeyPermission implements Serializable

serialVersionUID: 2419369267333836877L

Serialized Fields

userId

int userId

Class net.sf.basedb.core.data.keyring.UserProjects extends ProjectPermission implements Serializable

serialVersionUID: 1268159949109572997L

Serialized Fields

userId

int userId

Class net.sf.basedb.core.data.keyring.UserRoles extends Object implements Serializable

serialVersionUID: -4810248574594702409L

Serialized Fields

userId

int userId

roleId

int roleId

Package net.sf.basedb.core.hibernate

Class net.sf.basedb.core.hibernate.SessionWrapper extends AbstractQueryCache implements Serializable

serialVersionUID: 8075255339774194513L

Serialized Fields

session

org.hibernate.Session session

Class net.sf.basedb.core.hibernate.StatelessSessionWrapper extends AbstractQueryCache implements Serializable

serialVersionUID: -771179312268431157L

Serialized Fields

session

org.hibernate.StatelessSession session

Package net.sf.basedb.core.log

Class net.sf.basedb.core.log.LoggingInterceptor extends org.hibernate.EmptyInterceptor implements Serializable

serialVersionUID: -9108587050205509572L

Serialization Methods

readObject

private void readObject(ObjectInputStream ois)
                 throws ClassNotFoundException,
                        IOException

Throws:

ClassNotFoundException

IOException

writeObject

private void writeObject(ObjectOutputStream ois)
                  throws IOException

Throws:

IOException

Serialized Fields

logControl

LogControl logControl

logManagerFactory

LogManagerFactory logManagerFactory

logManager

LogManager logManager

changes

List<E> changes

Package net.sf.basedb.core.signal

Class net.sf.basedb.core.signal.SignalException extends BaseException implements Serializable

serialVersionUID: 7302030842713856895L

Class net.sf.basedb.core.signal.SignalReceivedException extends SignalException implements Serializable

serialVersionUID: -1498169053139644792L

Serialized Fields

signals

List<E> signals

Class net.sf.basedb.core.signal.UnsupportedSignalException extends SignalException implements Serializable

serialVersionUID: 5468472782043551962L

Serialized Fields

signal

Signal signal

Package net.sf.basedb.core.snapshot

Class net.sf.basedb.core.snapshot.AnnotationSetSnapshot extends Object implements Serializable

serialVersionUID: -6903210659055245440L

Serialization Methods

readObject

private void readObject(ObjectInputStream in)
                 throws IOException,
                        ClassNotFoundException

Throws:

IOException

ClassNotFoundException

writeObject

private void writeObject(ObjectOutputStream out)
                  throws IOException

Throws:

IOException

Class net.sf.basedb.core.snapshot.AnnotationSnapshot extends Object implements Serializable

serialVersionUID: -4919156087324273194L

Serialization Methods

readObject

private void readObject(ObjectInputStream in)
                 throws IOException,
                        ClassNotFoundException

Throws:

IOException

ClassNotFoundException

writeObject

private void writeObject(ObjectOutputStream out)
                  throws IOException

Throws:

IOException

Package net.sf.basedb.info

Class net.sf.basedb.info.AnnotationInfo extends Object implements Serializable

serialVersionUID: 1098477223071956298L

Serialized Fields

annotationTypeId

int annotationTypeId

valueType

String valueType

values

String[] values

Class net.sf.basedb.info.AnnotationTypeInfo extends CommonItemInfo implements Serializable

serialVersionUID: 4294524681521272236L

Serialized Fields

externalId

String externalId

defaultValue

String defaultValue

multiplicity

int multiplicity

valueType

String valueType

enumeration

boolean enumeration

protocolParameter

boolean protocolParameter

requiredForMiame

boolean requiredForMiame

enumValues

String[] enumValues

itemTypes

String[] itemTypes

Class net.sf.basedb.info.ArrayDesignInfo extends AnnotatedItemInfo implements Serializable

serialVersionUID: 5869031159593261755L

Serialized Fields

numDbFeatures

int numDbFeatures

numFileFeatures

int numFileFeatures

Class net.sf.basedb.info.BioAssaySetInfo extends BasicItemInfo implements Serializable

serialVersionUID: -1192040975292178464L

Serialized Fields

name

String name

description

String description

numReporters

int numReporters

numSpots

int numSpots

Class net.sf.basedb.info.DataFileTypeInfo extends BasicItemInfo implements Serializable

serialVersionUID: 4331580958109079719L

Serialized Fields

externalId

String externalId

extension

String extension

name

String name

description

String description

Class net.sf.basedb.info.ExperimentInfo extends CommonItemInfo implements Serializable

serialVersionUID: 7973320584668351841L

Serialized Fields

abstractText

String abstractText

affiliations

String affiliations

authors

String authors

experimentDesign

String experimentDesign

experimentType

String experimentType

publication

String publication

title

String title

publicationDate

Date publicationDate

pubMedId

String pubMedId

Class net.sf.basedb.info.ExtendedPropertyInfo extends Object implements Serializable

serialVersionUID: 970921289373893596L

Serialized Fields

name

String name

column

String column

title

String title

description

String description

length

int length

nullable

boolean nullable

insertable

boolean insertable

updateable

boolean updateable

Class net.sf.basedb.info.ProjectInfo extends OwnedItemInfo implements Serializable

serialVersionUID: -4415516272028020474L

Serialized Fields

description

String description

name

String name

Class net.sf.basedb.info.RawBioAssayInfo extends AnnotatedItemInfo implements Serializable

serialVersionUID: 2573863131262198133L

Serialized Fields

arrayDesignId

int arrayDesignId

platformId

int platformId

rawDataTypeId

String rawDataTypeId

Class net.sf.basedb.info.ReporterListInfo extends CommonItemInfo implements Serializable

serialVersionUID: 1073954178570174107L

Serialized Fields

externalId

String externalId

Class net.sf.basedb.info.VersionInfo extends Object implements Serializable

serialVersionUID: 9189853948028180946L

Serialized Fields

major

String major

minor

String minor

maintenance

String maintenance

build

int build

schema

int schema

Package net.sf.basedb.util

Class net.sf.basedb.util.Enumeration extends Object implements Serializable

serialVersionUID: 1222952912319368574L

Serialized Fields

entries

List<E> entries

locked

boolean locked

Class net.sf.basedb.util.NameableComparator extends Object implements Serializable

serialVersionUID: -845369301970627620L

Serialized Fields

descending

boolean descending

Class net.sf.basedb.util.ToStringComparator extends Object implements Serializable

serialVersionUID: -4125738438373368082L

Serialized Fields

descending

boolean descending