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2.17.2: 2011-06-17 | ||||||||
PREV NEXT | FRAMES NO FRAMES |
net.sf.* |
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net.sf.basedb.clients.jobagent.Agent | ||
---|---|---|
public static final int |
DEFAULT_CHECK_INTERVAL |
30 |
net.sf.basedb.clients.web.DuplicateWizardException | ||
---|---|---|
private static final long |
serialVersionUID |
8663167575860015142L |
net.sf.basedb.clients.web.ExperimentExplorer | ||
---|---|---|
public static final int |
DEFAULT_CACHE_SIZE |
100 |
public static final int |
SPOT_ALL |
-1 |
public static final int |
SPOT_AVG |
-2 |
net.sf.basedb.clients.web.ModeInfo | ||
---|---|---|
private static final boolean |
HAS_CANCELBUTTON |
true |
private static final boolean |
HAS_CHECK |
true |
private static final boolean |
HAS_CLOSEBUTTON |
true |
private static final boolean |
HAS_EDITLINK |
true |
private static final boolean |
HAS_FILTER |
true |
private static final boolean |
HAS_ICONS |
true |
private static final boolean |
HAS_NAVIGATOR |
true |
private static final boolean |
HAS_OKBUTTON |
true |
private static final boolean |
HAS_PROPERTYLINK |
true |
private static final boolean |
HAS_RADIO |
true |
private static final boolean |
HAS_TOOLBAR |
true |
private static final boolean |
IS_COMPACT |
true |
private static final boolean |
NO_CANCELBUTTON |
false |
private static final boolean |
NO_CHECK |
false |
private static final boolean |
NO_CLOSEBUTTON |
false |
private static final boolean |
NO_EDITLINK |
false |
private static final boolean |
NO_FILTER |
false |
private static final boolean |
NO_ICONS |
false |
private static final boolean |
NO_NAVIGATOR |
false |
private static final boolean |
NO_OKBUTTON |
false |
private static final boolean |
NO_PROPERTYLINK |
false |
private static final boolean |
NO_RADIO |
false |
private static final boolean |
NO_TOOLBAR |
false |
private static final boolean |
NOT_COMPACT |
false |
private static final boolean |
NOT_SELECTION_MODE |
false |
private static final boolean |
SELECTION_MODE |
true |
net.sf.basedb.clients.web.WebException | ||
---|---|---|
private static final long |
serialVersionUID |
8401139016420733632L |
net.sf.basedb.clients.web.extensions.ExtensionsControl | ||
---|---|---|
public static final String |
EXTENSIONS_URL |
"/WEB-INF/extensions" |
public static final String |
RESOURCES_URL |
"/extensions" |
public static final String |
SERVLET_URL |
"/extensions/servlet" |
net.sf.basedb.clients.web.extensions.JspContext | ||
---|---|---|
public static final String |
ATTRIBUTE_KEY |
"net.sf.basedb.clients.web.extensions.JspContext" |
net.sf.basedb.clients.web.extensions.ServletLoader | ||
---|---|---|
private static final String |
namespace |
"http://base.thep.lu.se/servlets.xsd" |
net.sf.basedb.clients.web.extensions.Settings | ||
---|---|---|
private static final String |
AUTO_INSTALL |
"auto-install" |
net.sf.basedb.clients.web.extensions.XJspCompiler | ||
---|---|---|
public static final String |
EXTENSIONS_URL |
"/WEB-INF/extensions" |
public static final String |
RESOURCES_URL |
"/extensions" |
net.sf.basedb.clients.web.extensions.service.Services | ||
---|---|---|
public static final String |
EXTENSION_POINT_ID |
"net.sf.basedb.clients.web.services" |
net.sf.basedb.clients.web.extensions.toolbar.ToolbarUtil | ||
---|---|---|
public static final int |
ITEM |
1 |
public static final int |
LIST |
0 |
net.sf.basedb.clients.web.fileupload.FileUpload | ||
---|---|---|
public static final long |
DEFAULT_TIMEOUT |
60000L |
private static final String |
EMPTY_STRING |
"" |
net.sf.basedb.clients.web.fileupload.UploadAbortedException | ||
---|---|---|
private static final long |
serialVersionUID |
5207696297213600544L |
net.sf.basedb.clients.web.formatter.FormatterSettings | ||
---|---|---|
public static final String |
DEFAULT_DATE_FORMAT |
"yyyy-MM-dd" |
public static final String |
DEFAULT_DATETIME_FORMAT |
"yyyy-MM-dd HH:mm:ss" |
public static final int |
DEFAULT_NUM_DECIMALS |
2 |
net.sf.basedb.clients.web.plugins.SimpleExport | ||
---|---|---|
private static final String |
COLUMN_PREFIX |
"columnPrefix" |
private static final String |
FORMAT |
"format" |
private static final String |
SAME_UNITS |
"sameUnits" |
private static final String |
WHICH_ITEMS |
"whichItems" |
private static final String |
WHICH_PROPERTIES |
"whichProperties" |
net.sf.basedb.clients.web.resources.Bundle | ||
---|---|---|
public static final String |
COMMON |
"net.sf.basedb.clients.web.resources.common" |
public static final String |
MENU |
"net.sf.basedb.clients.web.resources.menu" |
net.sf.basedb.clients.web.servlet.CompileAll | ||
---|---|---|
private static final long |
serialVersionUID |
5908370094706141413L |
net.sf.basedb.clients.web.servlet.Download | ||
---|---|---|
private static final long |
serialVersionUID |
6893272087926809158L |
net.sf.basedb.clients.web.servlet.ExperimentExplorerPlotServlet | ||
---|---|---|
private static final long |
serialVersionUID |
-445763412868957935L |
net.sf.basedb.clients.web.servlet.ExtensionsServlet | ||
---|---|---|
private static final long |
serialVersionUID |
338904698493055683L |
net.sf.basedb.clients.web.servlet.PlotServlet | ||
---|---|---|
private static final long |
serialVersionUID |
80128526417552573L |
net.sf.basedb.clients.web.servlet.RssNewsFeed | ||
---|---|---|
private static final long |
serialVersionUID |
-4097480516166797186L |
net.sf.basedb.clients.web.servlet.StartStopServlet | ||
---|---|---|
private static final long |
serialVersionUID |
8267932757094628788L |
net.sf.basedb.clients.web.servlet.Upload | ||
---|---|---|
private static final long |
serialVersionUID |
1404104707477507003L |
net.sf.basedb.clients.web.servlet.ViewSpotImage | ||
---|---|---|
private static final long |
serialVersionUID |
4627395145185119139L |
net.sf.basedb.clients.web.taglib.Body | ||
---|---|---|
private static final long |
serialVersionUID |
6814973550614834311L |
net.sf.basedb.clients.web.taglib.Button | ||
---|---|---|
private static final long |
serialVersionUID |
2058163945669701874L |
net.sf.basedb.clients.web.taglib.ButtonGroup | ||
---|---|---|
private static final long |
serialVersionUID |
-8808469470232672680L |
net.sf.basedb.clients.web.taglib.ExceptionCatcher | ||
---|---|---|
private static final long |
serialVersionUID |
-5694802936612085039L |
net.sf.basedb.clients.web.taglib.Head | ||
---|---|---|
private static final long |
serialVersionUID |
948719986796860767L |
net.sf.basedb.clients.web.taglib.Help | ||
---|---|---|
private static final long |
serialVersionUID |
-2754197259139443681L |
net.sf.basedb.clients.web.taglib.HideableSection | ||
---|---|---|
private static final long |
serialVersionUID |
4750788983708350436L |
net.sf.basedb.clients.web.taglib.Icon | ||
---|---|---|
private static final long |
serialVersionUID |
6886281373891822996L |
net.sf.basedb.clients.web.taglib.Note | ||
---|---|---|
private static final int |
NOTE_TYPE_ERROR |
1 |
private static final int |
NOTE_TYPE_INFORMATION |
2 |
private static final int |
NOTE_TYPE_QUESTION |
4 |
private static final int |
NOTE_TYPE_WARNING |
3 |
private static final long |
serialVersionUID |
7490498743887372136L |
net.sf.basedb.clients.web.taglib.Page | ||
---|---|---|
static final int |
PAGE_TYPE_DEFAULT |
0 |
static final int |
PAGE_TYPE_FRAMESET |
2 |
static final int |
PAGE_TYPE_INCLUDE |
3 |
static final int |
PAGE_TYPE_POPUP |
1 |
private static final long |
serialVersionUID |
-5693587214280114326L |
net.sf.basedb.clients.web.taglib.PropertyValue | ||
---|---|---|
private static final long |
serialVersionUID |
-92637960053523649L |
net.sf.basedb.clients.web.taglib.Select | ||
---|---|---|
private static final long |
serialVersionUID |
-9096279950931870965L |
net.sf.basedb.clients.web.taglib.extensions.Render | ||
---|---|---|
private static final long |
serialVersionUID |
-788121059344311519L |
net.sf.basedb.clients.web.taglib.extensions.Scripts | ||
---|---|---|
private static final long |
serialVersionUID |
-2867817254135934000L |
net.sf.basedb.clients.web.taglib.extensions.Stylesheets | ||
---|---|---|
private static final long |
serialVersionUID |
-3549659176356969880L |
net.sf.basedb.clients.web.taglib.menu.Menuitem | ||
---|---|---|
private static final long |
serialVersionUID |
1431778959423572670L |
net.sf.basedb.clients.web.taglib.menu.Menuseparator | ||
---|---|---|
private static final long |
serialVersionUID |
-1758168104130104042L |
net.sf.basedb.clients.web.taglib.menu.Submenu | ||
---|---|---|
private static final long |
serialVersionUID |
-9170636903520137656L |
net.sf.basedb.clients.web.taglib.path.Path | ||
---|---|---|
private static final long |
serialVersionUID |
6315346458189900215L |
net.sf.basedb.clients.web.taglib.path.PathElement | ||
---|---|---|
private static final long |
serialVersionUID |
3580594490341605165L |
net.sf.basedb.clients.web.taglib.tab.Tab | ||
---|---|---|
private static final long |
serialVersionUID |
-2308568821797105775L |
net.sf.basedb.clients.web.taglib.tab.TabControl | ||
---|---|---|
public static final int |
BOTTOM |
2 |
private static final long |
serialVersionUID |
1898616270560551262L |
public static final int |
TOP |
1 |
net.sf.basedb.clients.web.taglib.table.Button | ||
---|---|---|
private static final long |
serialVersionUID |
-6294795199053088632L |
net.sf.basedb.clients.web.taglib.table.Cell | ||
---|---|---|
private static final long |
serialVersionUID |
-1992298892993613884L |
net.sf.basedb.clients.web.taglib.table.CellValue | ||
---|---|---|
private static final long |
serialVersionUID |
4068184541728474047L |
net.sf.basedb.clients.web.taglib.table.ColumnDef | ||
---|---|---|
private static final long |
serialVersionUID |
-272408513116029365L |
net.sf.basedb.clients.web.taglib.table.Columns | ||
---|---|---|
private static final long |
serialVersionUID |
8857257637171219032L |
net.sf.basedb.clients.web.taglib.table.Data | ||
---|---|---|
private static final long |
serialVersionUID |
6633768910320305875L |
net.sf.basedb.clients.web.taglib.table.Form | ||
---|---|---|
private static final long |
serialVersionUID |
-6667213780186530313L |
net.sf.basedb.clients.web.taglib.table.Header | ||
---|---|---|
private static final long |
serialVersionUID |
-7541520513764712983L |
net.sf.basedb.clients.web.taglib.table.Hidden | ||
---|---|---|
private static final long |
serialVersionUID |
-2708187720621346925L |
net.sf.basedb.clients.web.taglib.table.Label | ||
---|---|---|
private static final long |
serialVersionUID |
5326481772609709567L |
net.sf.basedb.clients.web.taglib.table.Navigator | ||
---|---|---|
private static final long |
serialVersionUID |
3287798191943288674L |
net.sf.basedb.clients.web.taglib.table.Panel | ||
---|---|---|
private static final long |
serialVersionUID |
8435173953529878997L |
net.sf.basedb.clients.web.taglib.table.PresetSelector | ||
---|---|---|
private static final long |
serialVersionUID |
6787200020881710014L |
net.sf.basedb.clients.web.taglib.table.PropertyFilter | ||
---|---|---|
private static final long |
serialVersionUID |
-1007580995461268459L |
net.sf.basedb.clients.web.taglib.table.Row | ||
---|---|---|
private static final long |
serialVersionUID |
1975591924471893645L |
net.sf.basedb.clients.web.taglib.table.Rows | ||
---|---|---|
private static final long |
serialVersionUID |
2099882746242865479L |
net.sf.basedb.clients.web.taglib.table.Table | ||
---|---|---|
private static final long |
serialVersionUID |
-6717117667917148241L |
net.sf.basedb.clients.web.taglib.table.Toolbar | ||
---|---|---|
private static final long |
serialVersionUID |
-8719987407920036604L |
net.sf.basedb.clients.web.util.HTML | ||
---|---|---|
public static final int |
LINK_EMAIL |
2 |
public static final int |
LINK_URL |
1 |
public static final int |
SMART_IMAGES |
4 |
net.sf.basedb.core.AccountExpiredException | ||
---|---|---|
private static final long |
serialVersionUID |
3521477904486961158L |
net.sf.basedb.core.Affymetrix | ||
---|---|---|
public static final String |
CDF_LINK_NAME |
"cdf-file" |
public static final String |
CEL_LINK_NAME |
"cel-file" |
public static final String |
CHP_LINK_NAME |
"chp-file" |
net.sf.basedb.core.AlreadyLoggedInException | ||
---|---|---|
private static final long |
serialVersionUID |
3492139536509366378L |
net.sf.basedb.core.AnnotationType | ||
---|---|---|
public static final int |
MAX_DEFAULT_VALUE_LENGTH |
255 |
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
public static final int |
MAX_OPTION_LENGTH |
255 |
net.sf.basedb.core.ArraySlide | ||
---|---|---|
public static final int |
MAX_BARCODE_LENGTH |
255 |
net.sf.basedb.core.BaseException | ||
---|---|---|
private static final long |
serialVersionUID |
-3336541323718932298L |
net.sf.basedb.core.BioMaterial<D extends BioMaterialData> | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.BioMaterialEvent | ||
---|---|---|
public static final int |
MAX_COMMENT_LENGTH |
65535 |
net.sf.basedb.core.BioMaterialList | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.BioPlate | ||
---|---|---|
public static final int |
MAX_BARCODE_LENGTH |
255 |
net.sf.basedb.core.BioPlateEventParticipant | ||
---|---|---|
public static final int |
MAX_ROLE_LENGTH |
255 |
net.sf.basedb.core.BioPlateEventType | ||
---|---|---|
public static final String |
CREATE_BIOMATERIAL |
"net.sf.basedb.core.BioPlateEventType.CREATE_BIOMATERIAL" |
public static final String |
GENERIC |
"net.sf.basedb.core.BioPlateEventType.GENERIC" |
public static final String |
HYBRIDIZATION |
"net.sf.basedb.core.BioPlateEventType.HYBRIDIZATION" |
public static final String |
MOVE |
"net.sf.basedb.core.BioPlateEventType.MOVE" |
public static final String |
PLACE_ON_PLATE |
"net.sf.basedb.core.BioPlateEventType.PLACE_ON_PLACE" |
net.sf.basedb.core.Client | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.ConfigurationException | ||
---|---|---|
private static final long |
serialVersionUID |
-4529759727198656159L |
net.sf.basedb.core.ConnectionClosedException | ||
---|---|---|
private static final long |
serialVersionUID |
-724179591893028717L |
net.sf.basedb.core.DatabaseException | ||
---|---|---|
private static final long |
serialVersionUID |
-8341857688856615743L |
net.sf.basedb.core.DataFileType | ||
---|---|---|
public static final String |
AFFYMETRIX_CDF |
"affymetrix.cdf" |
public static final String |
AFFYMETRIX_CEL |
"affymetrix.cel" |
public static final String |
BASEFILE_MATRIX |
"basefile.matrix" |
public static final String |
BASEFILE_SERIAL |
"basefile.serial" |
public static final String |
BFS_METADATA |
"bfs.metadata" |
public static final String |
GENERIC_EXTRAVALUE_DATA |
"generic.extravaluedata" |
public static final String |
GENERIC_PRINT_MAP |
"generic.printmap" |
public static final String |
GENERIC_RAW_DATA |
"generic.rawdata" |
public static final String |
GENERIC_REPORTER_MAP |
"generic.reportermap" |
public static final String |
GENERIC_SPOT_DATA |
"generic.spotdata" |
public static final int |
MAX_CLASSNAME_LENGTH |
255 |
public static final int |
MAX_EXTENSION_LENGTH |
255 |
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
public static final int |
MAX_JARPATH_LENGTH |
65535 |
public static final String |
MEV_TDMS |
"mev.tdms" |
net.sf.basedb.core.DateFormatException | ||
---|---|---|
private static final long |
serialVersionUID |
-4312755232208681515L |
net.sf.basedb.core.DetachedItemException | ||
---|---|---|
private static final long |
serialVersionUID |
4694041774316355349L |
net.sf.basedb.core.Directory | ||
---|---|---|
public static final String |
HOME |
"net.sf.basedb.core.Directory.HOME" |
public static final String |
ROOT |
"net.sf.basedb.core.Directory.ROOT" |
public static final String |
TEMPLATE |
"net.sf.basedb.core.Directory.TEMPLATE" |
net.sf.basedb.core.DisallowedValueException | ||
---|---|---|
private static final long |
serialVersionUID |
1332642295480924999L |
net.sf.basedb.core.Experiment | ||
---|---|---|
public static final int |
MAX_ABSTRACT_LENGTH |
65535 |
public static final int |
MAX_AFFILIATIONS_LENGTH |
65535 |
public static final int |
MAX_AUTHORS_LENGTH |
65535 |
public static final int |
MAX_EXPERIMENT_DESIGN_LENGTH |
65535 |
public static final int |
MAX_EXPERIMENT_TYPE_LENGTH |
65535 |
public static final int |
MAX_PUBLICATION_LENGTH |
65535 |
public static final int |
MAX_PUBMEDID_LENGTH |
255 |
public static final int |
MAX_TITLE_LENGTH |
65535 |
net.sf.basedb.core.net.sf.basedb.core.ExtendedPropertyAccessor.GetterSetter | ||
---|---|---|
private static final long |
serialVersionUID |
3949841104403095740L |
net.sf.basedb.core.ExtraValueType | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.File | ||
---|---|---|
public static final int |
MAX_CHARSET_LENGTH |
255 |
public static final int |
MAX_MIMETYPE_LENGTH |
255 |
public static final int |
MAX_URL_LENGTH |
2000 |
net.sf.basedb.core.FileServer | ||
---|---|---|
public static final int |
MAX_CERTIFICATE_LENGTH |
65535 |
public static final int |
MAX_PASSWORD_LENGTH |
255 |
public static final int |
MAX_USERNAME_LENGTH |
255 |
net.sf.basedb.core.FileType | ||
---|---|---|
public static final String |
EXTRAVALUE_DATA |
"net.sf.basedb.core.FileType.EXTRAVALUE_DATA" |
public static final String |
IMAGE |
"net.sf.basedb.core.FileType.IMAGE" |
public static final String |
PLATE |
"net.sf.basedb.core.FileType.PLATE" |
public static final String |
PLATE_MAPPING |
"net.sf.basedb.core.FileType.PLATE_MAPPING" |
public static final String |
PRINT_MAP |
"net.sf.basedb.core.FileType.PRINT_MAP" |
public static final String |
PROTOCOL |
"net.sf.basedb.core.FileType.PROTOCOL" |
public static final String |
RAW_DATA |
"net.sf.basedb.core.FileType.RAW_DATA" |
public static final String |
REPORTER |
"net.sf.basedb.core.FileType.REPORTER" |
public static final String |
REPORTER_MAP |
"net.sf.basedb.core.FileType.REPORTER_MAP" |
public static final String |
SPOT_DATA |
"net.sf.basedb.core.FileType.SPOT_DATA" |
public static final String |
SPOT_IMAGES |
"net.sf.basedb.core.FileType.SPOT_IMAGES" |
net.sf.basedb.core.Formula | ||
---|---|---|
public static final int |
MAX_FORMULA_LENGTH |
255 |
net.sf.basedb.core.Group | ||
---|---|---|
public static final String |
EVERYONE |
"net.sf.basedb.core.Group.EVERYONE" |
net.sf.basedb.core.Hardware | ||
---|---|---|
public static final int |
MAX_VERSIONSTRING_LENGTH |
255 |
net.sf.basedb.core.HardwareType | ||
---|---|---|
public static final String |
FREEZER |
"net.sf.basedb.core.HardwareType.FREEZER" |
public static final String |
HYBRIDIZATION_STATION |
"net.sf.basedb.core.HardwareType.HYBRIDIZATION_STATION" |
public static final String |
OTHER |
"net.sf.basedb.core.HardwareType.OTHER" |
public static final String |
PRINT_ROBOT |
"net.sf.basedb.core.HardwareType.PRINT_ROBOT" |
public static final String |
SCANNER |
"net.sf.basedb.core.HardwareType.SCANNER" |
net.sf.basedb.core.Help | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.InvalidAnnotationException | ||
---|---|---|
private static final long |
serialVersionUID |
-3711446965517938282L |
net.sf.basedb.core.InvalidDataException | ||
---|---|---|
private static final long |
serialVersionUID |
-7183580873652712069L |
net.sf.basedb.core.InvalidPasswordException | ||
---|---|---|
private static final long |
serialVersionUID |
-7696617448870042174L |
net.sf.basedb.core.InvalidPathException | ||
---|---|---|
private static final long |
serialVersionUID |
7033749590246898005L |
net.sf.basedb.core.InvalidRelationException | ||
---|---|---|
private static final long |
serialVersionUID |
-7837408790194110261L |
net.sf.basedb.core.InvalidUseOfNullException | ||
---|---|---|
private static final long |
serialVersionUID |
-5438951825783349420L |
net.sf.basedb.core.ItemAlreadyExistsException | ||
---|---|---|
private static final long |
serialVersionUID |
8355317881537705674L |
net.sf.basedb.core.ItemContext | ||
---|---|---|
public static final String |
DEFAULT_NAME |
"- default -" |
net.sf.basedb.core.ItemInUseException | ||
---|---|---|
private static final long |
serialVersionUID |
8687133796504091488L |
net.sf.basedb.core.ItemModifiedException | ||
---|---|---|
private static final long |
serialVersionUID |
6443430913361934576L |
net.sf.basedb.core.ItemNotFoundException | ||
---|---|---|
private static final long |
serialVersionUID |
-4554252030783275058L |
net.sf.basedb.core.Job | ||
---|---|---|
public static final int |
MAX_SERVER_LENGTH |
255 |
public static final int |
MAX_STACK_TRACE_LENGTH |
65535 |
public static final int |
MAX_STATUS_MESSAGE_LENGTH |
65535 |
net.sf.basedb.core.net.sf.basedb.core.Job.ProgressReporterImpl | ||
---|---|---|
private static final long |
UPDATE_INTERVAL |
5000L |
private static final int |
UPDATE_PERCENT |
5 |
net.sf.basedb.core.JobAgent | ||
---|---|---|
public static final int |
DEFAULT_PORT |
47822 |
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
public static final int |
MAX_SERVER_LENGTH |
255 |
net.sf.basedb.core.JobAgentSettings | ||
---|---|---|
public static final int |
MAX_JARPATH_LENGTH |
65535 |
net.sf.basedb.core.Message | ||
---|---|---|
public static final int |
MAX_FROM_LENGTH |
255 |
net.sf.basedb.core.MimeType | ||
---|---|---|
public static final int |
MAX_EXTENSION_LENGTH |
255 |
net.sf.basedb.core.Nameable | ||
---|---|---|
public static final int |
MAX_DESCRIPTION_LENGTH |
65535 |
public static final int |
MAX_NAME_LENGTH |
255 |
net.sf.basedb.core.NotLoggedInException | ||
---|---|---|
private static final long |
serialVersionUID |
5892928408034076760L |
net.sf.basedb.core.NumberOutOfRangeException | ||
---|---|---|
private static final long |
serialVersionUID |
5912381046544116726L |
net.sf.basedb.core.ParameterException | ||
---|---|---|
private static final long |
serialVersionUID |
5726803477665248712L |
net.sf.basedb.core.Path | ||
---|---|---|
public static final String |
INVALID_CHARACTERS |
"~\\/:;*?<>|\"" |
net.sf.basedb.core.PermissionDeniedException | ||
---|---|---|
private static final long |
serialVersionUID |
736019555576108955L |
net.sf.basedb.core.Plate | ||
---|---|---|
public static final int |
MAX_BARCODE_LENGTH |
255 |
net.sf.basedb.core.PlateEvent | ||
---|---|---|
public static final int |
MAX_COMMENT_LENGTH |
65535 |
net.sf.basedb.core.PlateMapping | ||
---|---|---|
public static final int |
MAX_IMAGE_LENGTH |
255 |
net.sf.basedb.core.Platform | ||
---|---|---|
public static final String |
AFFYMETRIX |
"affymetrix" |
public static final String |
GENERIC |
"generic" |
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.PlatformVariant | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.PluginDefinition | ||
---|---|---|
public static final int |
MAX_CLASSNAME_LENGTH |
255 |
public static final int |
MAX_CONTACT_LENGTH |
255 |
public static final int |
MAX_COPYRIGHT_LENGTH |
255 |
public static final int |
MAX_EMAIL_LENGTH |
255 |
public static final int |
MAX_JARPATH_LENGTH |
65535 |
public static final int |
MAX_NAME_LENGTH |
255 |
public static final int |
MAX_URL_LENGTH |
255 |
public static final int |
MAX_VERSION_LENGTH |
255 |
net.sf.basedb.core.PluginType | ||
---|---|---|
public static final int |
MAX_INTERFACENAME_LENGTH |
255 |
public static final int |
MAX_JARPATH_LENGTH |
65535 |
net.sf.basedb.core.PredefinedQuery | ||
---|---|---|
private static final String |
commonQueryFile |
"/common-queries.xml" |
net.sf.basedb.core.PropertyFilter | ||
---|---|---|
public static final int |
MAX_VALUE_LENGTH |
65535 |
public static final boolean |
TEMPORARY |
true |
private static final String |
value_separator |
"|" |
net.sf.basedb.core.Protocol | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.ProtocolType | ||
---|---|---|
public static final String |
EXTRACTION |
"net.sf.basedb.core.ProtocolType.EXTRACTION" |
public static final String |
FEATURE_EXTRACTION |
"net.sf.basedb.core.ProtocolType.FEATURE_EXTRACTION" |
public static final String |
HYBRIDIZATION |
"net.sf.basedb.core.ProtocolType.HYBRIDIZATION" |
public static final String |
LABELING |
"net.sf.basedb.core.ProtocolType.LABELING" |
public static final String |
POOLING |
"net.sf.basedb.core.ProtocolType.POOLING" |
public static final String |
PRINTING |
"net.sf.basedb.core.ProtocolType.PRINTING" |
public static final String |
SAMPLING |
"net.sf.basedb.core.ProtocolType.SAMPLING" |
public static final String |
SCANNING |
"net.sf.basedb.core.ProtocolType.SCANNING" |
net.sf.basedb.core.Quantity | ||
---|---|---|
public static final String |
ABSORBED_DOSE |
"net.sf.basedb.core.Quantity.ABSORBED_DOSE" |
public static final String |
ACCELERATION |
"net.sf.basedb.core.Quantity.ACCELERATION" |
public static final String |
ANGLE |
"net.sf.basedb.core.Quantity.ANGLE" |
public static final String |
AREA |
"net.sf.basedb.core.Quantity.AREA" |
public static final String |
CAPACITANCE |
"net.sf.basedb.core.Quantity.CAPACITANCE" |
public static final String |
CHARGE |
"net.sf.basedb.core.Quantity.CHARGE" |
public static final String |
CURRENT |
"net.sf.basedb.core.Quantity.CURRENT" |
public static final String |
DENSITY |
"net.sf.basedb.core.Quantity.DENSITY" |
public static final String |
ENERGY |
"net.sf.basedb.core.Quantity.ENERGY" |
public static final String |
EQUIVALENT_DOSE |
"net.sf.basedb.core.Quantity.EQUIVALENT_DOSE" |
public static final String |
FLOW_RATE |
"net.sf.basedb.core.Quantity.FLOW_RATE" |
public static final String |
FORCE |
"net.sf.basedb.core.Quantity.FORCE" |
public static final String |
FRACTION |
"net.sf.basedb.core.Quantity.FRACTION" |
public static final String |
FREQUENCY |
"net.sf.basedb.core.Quantity.FREQUENCY" |
public static final String |
LENGTH |
"net.sf.basedb.core.Quantity.LENGTH" |
public static final String |
MAGNETIC_FIELD |
"net.sf.basedb.core.Quantity.MAGNETIC_FIELD" |
public static final String |
MAGNETIC_FLUX |
"net.sf.basedb.core.Quantity.MAGNETIC_FLUX" |
public static final String |
MASS |
"net.sf.basedb.core.Quantity.MASS" |
public static final int |
MAX_REFERENCE_UNIT_LENGTH |
255 |
public static final String |
MOMENTUM |
"net.sf.basedb.core.Quantity.MOMENTUM" |
public static final String |
POTENTIAL |
"net.sf.basedb.core.Quantity.POTENTIAL" |
public static final String |
POWER |
"net.sf.basedb.core.Quantity.POWER" |
public static final String |
PRESSURE |
"net.sf.basedb.core.Quantity.PRESSURE" |
public static final String |
RADIOACTIVITY |
"net.sf.basedb.core.Quantity.RADIOACTIVITY" |
public static final String |
RESISTANCE |
"net.sf.basedb.core.Quantity.RESISTANCE" |
public static final String |
STORAGE_SIZE |
"net.sf.basedb.core.Quantity.STORAGE_SIZE" |
public static final String |
SUBSTANCE |
"net.sf.basedb.core.Quantity.SUBSTANCE" |
public static final String |
TEMPERATURE |
"net.sf.basedb.core.Quantity.TEMPERATURE" |
public static final String |
THERMAL_CONDUCTIVITY |
"net.sf.basedb.core.Quantity.THERMAL_CONDUCTIVITY" |
public static final String |
TIME |
"net.sf.basedb.core.Quantity.TIME" |
public static final String |
TORGUE |
"net.sf.basedb.core.Quantity.TORQUE" |
public static final String |
VELOCITY |
"net.sf.basedb.core.Quantity.VELOCITY" |
public static final String |
VOLUME |
"net.sf.basedb.core.Quantity.VOLUME" |
net.sf.basedb.core.Quota | ||
---|---|---|
public static final String |
DEFAULT |
"net.sf.basedb.core.Quota.DEFAULT" |
public static final long |
UNDEFINED |
-2L |
public static final long |
UNLIMITED |
-1L |
public static final String |
UNRESTRICTED |
"net.sf.basedb.core.Quota.UNRESTRICTED" |
net.sf.basedb.core.QuotaException | ||
---|---|---|
private static final long |
serialVersionUID |
4279045703338054258L |
net.sf.basedb.core.QuotaType | ||
---|---|---|
public static final String |
EXPERIMENT |
"net.sf.basedb.core.QuotaType.EXPERIMENT" |
public static final String |
FILE |
"net.sf.basedb.core.QuotaType.FILE" |
public static final String |
RAW_DATA |
"net.sf.basedb.core.QuotaType.RAWDATA" |
public static final String |
TOTAL |
"net.sf.basedb.core.QuotaType.TOTAL" |
net.sf.basedb.core.RawBioAssay | ||
---|---|---|
public static final int |
MAX_HEADER_NAME_LENGTH |
255 |
public static final int |
MAX_HEADER_VALUE_LENGTH |
65535 |
net.sf.basedb.core.ReporterList | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.Role | ||
---|---|---|
public static final String |
ADMINISTRATOR |
"net.sf.basedb.core.Role.ADMINISTRATOR" |
public static final String |
GUEST |
"net.sf.basedb.core.Role.GUEST" |
public static final String |
JOBAGENT |
"net.sf.basedb.core.Role.JOBAGENT" |
public static final String |
POWER_USER |
"net.sf.basedb.core.Role.POWER_USER" |
public static final String |
SUPERVISOR |
"net.sf.basedb.core.Role.SUPERVISOR" |
public static final String |
USER |
"net.sf.basedb.core.Role.USER" |
net.sf.basedb.core.Setting<D extends SettingData> | ||
---|---|---|
public static final int |
MAX_NAME_LENGTH |
255 |
public static final int |
MAX_VALUE_LENGTH |
65535 |
net.sf.basedb.core.Software | ||
---|---|---|
public static final int |
MAX_VERSIONSTRING_LENGTH |
255 |
net.sf.basedb.core.SoftwareType | ||
---|---|---|
public static final String |
FEATURE_EXTRACTION |
"net.sf.basedb.core.SoftwareType.FEATURE_EXTRACTION" |
net.sf.basedb.core.SpotImages | ||
---|---|---|
public static final int |
NUM_SPOT_IMAGES |
16 |
net.sf.basedb.core.StringTooLongException | ||
---|---|---|
private static final long |
serialVersionUID |
241736463987555060L |
net.sf.basedb.core.SystemItem | ||
---|---|---|
public static final int |
MAX_SYSTEM_ID_LENGTH |
255 |
net.sf.basedb.core.Unit | ||
---|---|---|
public static final int |
MAX_SYMBOL_LENGTH |
255 |
net.sf.basedb.core.UnmodifiableResultList<T> | ||
---|---|---|
private static final long |
serialVersionUID |
-1514212917126590560L |
net.sf.basedb.core.UnsavedItemException | ||
---|---|---|
private static final long |
serialVersionUID |
9092496684529135233L |
net.sf.basedb.core.UnsupportedFileFormatException | ||
---|---|---|
private static final long |
serialVersionUID |
-6974393471798478411L |
net.sf.basedb.core.User | ||
---|---|---|
public static final int |
MAX_ADDRESS_LENGTH |
255 |
public static final int |
MAX_EMAIL_LENGTH |
255 |
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
public static final int |
MAX_FAX_LENGTH |
255 |
public static final int |
MAX_LOGIN_LENGTH |
255 |
public static final int |
MAX_ORGANISATION_LENGTH |
255 |
public static final int |
MAX_PHONE_LENGTH |
255 |
public static final int |
MAX_URL_LENGTH |
255 |
public static final String |
ROOT |
"net.sf.basedb.core.User.ROOT" |
net.sf.basedb.core.VirtualColumn | ||
---|---|---|
public static final boolean |
INDEXED |
true |
public static final boolean |
NULLABLE |
true |
public static final boolean |
PRIMARY_KEY |
true |
net.sf.basedb.core.authentication.AuthenticationException | ||
---|---|---|
private static final long |
serialVersionUID |
4258462779202665788L |
net.sf.basedb.core.authentication.InvalidPasswordException | ||
---|---|---|
private static final long |
serialVersionUID |
6007471910116426466L |
net.sf.basedb.core.authentication.UnknownLoginException | ||
---|---|---|
private static final long |
serialVersionUID |
2869436058103572464L |
net.sf.basedb.core.data.AnnotationTypeData | ||
---|---|---|
public static final int |
MAX_DEFAULT_VALUE_LENGTH |
255 |
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
public static final int |
MAX_OPTION_LENGTH |
255 |
net.sf.basedb.core.data.ArraySlideData | ||
---|---|---|
public static final int |
MAX_BARCODE_LENGTH |
255 |
net.sf.basedb.core.data.BioMaterialData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.BioMaterialEventData | ||
---|---|---|
public static final int |
MAX_COMMENT_LENGTH |
65535 |
net.sf.basedb.core.data.BioMaterialListData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.BioPlateData | ||
---|---|---|
public static final int |
MAX_BARCODE_LENGTH |
255 |
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.BioPlateEventParticipantData | ||
---|---|---|
public static final int |
MAX_ROLE_LENGTH |
255 |
net.sf.basedb.core.data.ChangeHistoryDetailData | ||
---|---|---|
public static final int |
MAX_CHANGE_INFO_LENGTH |
65535 |
net.sf.basedb.core.data.ClientData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.ContextData | ||
---|---|---|
public static final int |
MAX_NAME_LENGTH |
255 |
public static final int |
MAX_SORTPROPERTY_LENGTH |
255 |
public static final int |
MAX_SUBCONTEXT_LENGTH |
255 |
net.sf.basedb.core.data.ContextIndex | ||
---|---|---|
private static final long |
serialVersionUID |
-30654936444512825L |
net.sf.basedb.core.data.DataFileTypeData | ||
---|---|---|
public static final int |
MAX_CLASSNAME_LENGTH |
255 |
public static final int |
MAX_EXTENSION_LENGTH |
255 |
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
public static final int |
MAX_JARPATH_LENGTH |
65535 |
net.sf.basedb.core.data.ExperimentData | ||
---|---|---|
public static final int |
MAX_ABSTRACT_LENGTH |
65535 |
public static final int |
MAX_AFFILIATIONS_LENGTH |
65535 |
public static final int |
MAX_AUTHORS_LENGTH |
65535 |
public static final int |
MAX_EXPERIMENT_DESIGN_LENGTH |
65535 |
public static final int |
MAX_EXPERIMENT_TYPE_LENGTH |
65535 |
public static final int |
MAX_PUBLICATION_LENGTH |
65535 |
public static final int |
MAX_PUBMEDID_LENGTH |
255 |
public static final int |
MAX_TITLE_LENGTH |
65535 |
net.sf.basedb.core.data.ExtraValueTypeData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.FeatureData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.FileData | ||
---|---|---|
public static final int |
MAX_CHARSET_LENGTH |
255 |
public static final int |
MAX_MIMETYPE_LENGTH |
255 |
public static final int |
MAX_URL_LENGTH |
2000 |
net.sf.basedb.core.data.FileServerData | ||
---|---|---|
public static final int |
MAX_CERTIFICATE_LENGTH |
65535 |
public static final int |
MAX_PASSWORD_LENGTH |
255 |
public static final int |
MAX_USERNAME_LENGTH |
255 |
net.sf.basedb.core.data.FileTypeIndex | ||
---|---|---|
private static final long |
serialVersionUID |
5213031457561980770L |
net.sf.basedb.core.data.FormulaData | ||
---|---|---|
public static final int |
MAX_FORMULA_LENGTH |
255 |
public static final int |
MAX_RAWDATATYPE_LENGTH |
255 |
net.sf.basedb.core.data.GuiContextData | ||
---|---|---|
private static final long |
serialVersionUID |
8098514351740554692L |
net.sf.basedb.core.data.HardwareData | ||
---|---|---|
public static final int |
MAX_VERSIONSTRING_LENGTH |
255 |
net.sf.basedb.core.data.HelpData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.JobAgentData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
public static final int |
MAX_SERVER_LENGTH |
255 |
net.sf.basedb.core.data.JobAgentSettingsData | ||
---|---|---|
public static final int |
MAX_JARPATH_LENGTH |
65535 |
net.sf.basedb.core.data.JobData | ||
---|---|---|
public static final int |
MAX_COMMAND_LENGTH |
255 |
public static final int |
MAX_PLUGIN_VERSION_LENGTH |
255 |
public static final int |
MAX_SERVER_LENGTH |
255 |
public static final int |
MAX_SIGNAL_TRANSPORTER_LENGTH |
655536 |
public static final int |
MAX_STACK_TRACE_LENGTH |
65535 |
public static final int |
MAX_STATUS_MESSAGE_LENGTH |
65535 |
public static final int |
MAX_SUBCONTEXT_LENGTH |
255 |
net.sf.basedb.core.data.MappingCoordinate | ||
---|---|---|
private static final long |
serialVersionUID |
-142540401347259827L |
net.sf.basedb.core.data.MessageData | ||
---|---|---|
public static final int |
MAX_FROM_LENGTH |
255 |
net.sf.basedb.core.data.MimeTypeData | ||
---|---|---|
public static final int |
MAX_EXTENSION_LENGTH |
255 |
net.sf.basedb.core.data.NameableData | ||
---|---|---|
public static final int |
MAX_DESCRIPTION_LENGTH |
65535 |
public static final int |
MAX_NAME_LENGTH |
255 |
net.sf.basedb.core.data.ParameterValueData<T> | ||
---|---|---|
public static final int |
MAX_DESCRIPTION_LENGTH |
65535 |
public static final int |
MAX_LABEL_LENGTH |
255 |
net.sf.basedb.core.data.PlateCoordinate | ||
---|---|---|
private static final long |
serialVersionUID |
-7499789811217707905L |
net.sf.basedb.core.data.PlateData | ||
---|---|---|
public static final int |
MAX_BARCODE_LENGTH |
255 |
net.sf.basedb.core.data.PlateEventData | ||
---|---|---|
public static final int |
MAX_COMMENT_LENGTH |
65535 |
net.sf.basedb.core.data.PlateMappingData | ||
---|---|---|
public static final int |
MAX_IMAGE_LENGTH |
255 |
net.sf.basedb.core.data.PlatformData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.PlatformVariantData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.PluginDefinitionData | ||
---|---|---|
public static final int |
MAX_CLASSNAME_LENGTH |
255 |
public static final int |
MAX_CONTACT_LENGTH |
255 |
public static final int |
MAX_COPYRIGHT_LENGTH |
255 |
public static final int |
MAX_DESCRIPTION_LENGTH |
65535 |
public static final int |
MAX_EMAIL_LENGTH |
255 |
public static final int |
MAX_JARPATH_LENGTH |
65535 |
public static final int |
MAX_NAME_LENGTH |
255 |
public static final int |
MAX_URL_LENGTH |
255 |
public static final int |
MAX_VERSION_LENGTH |
255 |
net.sf.basedb.core.data.PluginTypeData | ||
---|---|---|
public static final int |
MAX_INTERFACENAME_LENGTH |
255 |
public static final int |
MAX_JARPATH_LENGTH |
65535 |
net.sf.basedb.core.data.PropertyFilterData | ||
---|---|---|
public static final int |
MAX_VALUE_LENGTH |
65535 |
net.sf.basedb.core.data.ProtocolData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.QuantityData | ||
---|---|---|
public static final int |
MAX_REFERENCE_UNIT_LENGTH |
255 |
net.sf.basedb.core.data.QuotaIndex | ||
---|---|---|
private static final long |
serialVersionUID |
4679331005994321116L |
net.sf.basedb.core.data.RawBioAssayData | ||
---|---|---|
public static final int |
MAX_HEADER_NAME_LENGTH |
255 |
public static final int |
MAX_HEADER_VALUE_LENGTH |
65535 |
net.sf.basedb.core.data.ReporterData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
public static final int |
MAX_LAST_SOURCE_LENGTH |
255 |
public static final int |
MAX_SYMBOL_LENGTH |
255 |
net.sf.basedb.core.data.ReporterListData | ||
---|---|---|
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
net.sf.basedb.core.data.ReporterListScoreData | ||
---|---|---|
private static final long |
serialVersionUID |
4579749871479306251L |
net.sf.basedb.core.data.SessionData | ||
---|---|---|
public static final int |
MAX_LOGIN_COMMENT_LENGTH |
65535 |
public static final int |
MAX_REMOTE_ID_LENGTH |
255 |
net.sf.basedb.core.data.SettingData | ||
---|---|---|
public static final int |
MAX_NAME_LENGTH |
255 |
public static final int |
MAX_VALUE_LENGTH |
65535 |
net.sf.basedb.core.data.SoftwareData | ||
---|---|---|
public static final int |
MAX_VERSIONSTRING_LENGTH |
255 |
net.sf.basedb.core.data.SystemData | ||
---|---|---|
public static final int |
MAX_SYSTEM_ID_LENGTH |
255 |
net.sf.basedb.core.data.UnitData | ||
---|---|---|
public static final int |
MAX_SYMBOL_LENGTH |
255 |
net.sf.basedb.core.data.UsedQuantity | ||
---|---|---|
private static final long |
serialVersionUID |
-2938528453996490494L |
net.sf.basedb.core.data.UserData | ||
---|---|---|
public static final int |
MAX_ADDRESS_LENGTH |
255 |
public static final int |
MAX_EMAIL_LENGTH |
255 |
public static final int |
MAX_EXTERNAL_ID_LENGTH |
255 |
public static final int |
MAX_FAX_LENGTH |
255 |
public static final int |
MAX_LOGIN_LENGTH |
255 |
public static final int |
MAX_ORGANISATION_LENGTH |
255 |
public static final int |
MAX_PHONE_LENGTH |
255 |
public static final int |
MAX_URL_LENGTH |
255 |
net.sf.basedb.core.data.VersionedParameter | ||
---|---|---|
private static final long |
serialVersionUID |
840111442332381385L |
net.sf.basedb.core.data.keyring.GroupGroups | ||
---|---|---|
private static final long |
serialVersionUID |
3058557529392800869L |
net.sf.basedb.core.data.keyring.GroupKeys | ||
---|---|---|
private static final long |
serialVersionUID |
3951186057137611850L |
net.sf.basedb.core.data.keyring.GroupProjects | ||
---|---|---|
private static final long |
serialVersionUID |
-7931224932031764513L |
net.sf.basedb.core.data.keyring.PluginKeys | ||
---|---|---|
private static final long |
serialVersionUID |
-8514403856902670522L |
net.sf.basedb.core.data.keyring.ProjectKeys | ||
---|---|---|
private static final long |
serialVersionUID |
3491327528105067768L |
net.sf.basedb.core.data.keyring.RoleKeys | ||
---|---|---|
private static final long |
serialVersionUID |
-2640304357731797636L |
net.sf.basedb.core.data.keyring.UserGroups | ||
---|---|---|
private static final long |
serialVersionUID |
-3481737087412081175L |
net.sf.basedb.core.data.keyring.UserKeys | ||
---|---|---|
private static final long |
serialVersionUID |
2419369267333836877L |
net.sf.basedb.core.data.keyring.UserProjects | ||
---|---|---|
private static final long |
serialVersionUID |
1268159949109572997L |
net.sf.basedb.core.data.keyring.UserRoles | ||
---|---|---|
private static final long |
serialVersionUID |
-4810248574594702409L |
net.sf.basedb.core.hibernate.SessionWrapper | ||
---|---|---|
private static final long |
serialVersionUID |
8075255339774194513L |
net.sf.basedb.core.hibernate.StatelessSessionWrapper | ||
---|---|---|
private static final long |
serialVersionUID |
-771179312268431157L |
net.sf.basedb.core.log.LoggingInterceptor | ||
---|---|---|
private static final long |
serialVersionUID |
-9108587050205509572L |
net.sf.basedb.core.plugin.About | ||
---|---|---|
public static final int |
MAX_INFORMATION_LENGTH |
255 |
net.sf.basedb.core.plugin.AbstractAnalysisPlugin | ||
---|---|---|
protected static final String |
CHILD_DESCRIPTION |
"childDescription" |
protected static final String |
CHILD_NAME |
"childName" |
protected static final String |
SOURCE_BIOASSAYS |
"bioAssays" |
protected static final String |
SOURCE_BIOASSAYSET |
"source" |
protected static final String |
TRANSFORMATION_NAME |
"transformationName" |
net.sf.basedb.core.plugin.AbstractExporterPlugin | ||
---|---|---|
protected static final String |
OVERWRITE |
"overwrite" |
protected static final String |
SAVE_AS |
"saveAs" |
net.sf.basedb.core.plugin.AbstractPlugin | ||
---|---|---|
protected static final String |
COPY_ANNOTATIONS |
"copyAnnotations" |
protected static final String |
OVERWRITE_ANNOTATIONS |
"overwriteAnnotations" |
net.sf.basedb.core.plugin.Request | ||
---|---|---|
public static final String |
COMMAND_CONFIGURE_JOB |
"_config_job" |
public static final String |
COMMAND_CONFIGURE_PLUGIN |
"_config_plugin" |
public static final String |
COMMAND_EXECUTE |
"_exec" |
net.sf.basedb.core.signal.SignalException | ||
---|---|---|
private static final long |
serialVersionUID |
7302030842713856895L |
net.sf.basedb.core.signal.SignalReceivedException | ||
---|---|---|
private static final long |
serialVersionUID |
-1498169053139644792L |
net.sf.basedb.core.signal.UnsupportedSignalException | ||
---|---|---|
private static final long |
serialVersionUID |
5468472782043551962L |
net.sf.basedb.core.snapshot.AnnotationSetSnapshot | ||
---|---|---|
public static final int |
FILE_VERSION |
1 |
private static final long |
serialVersionUID |
-6903210659055245440L |
net.sf.basedb.core.snapshot.AnnotationSnapshot | ||
---|---|---|
private static final long |
serialVersionUID |
-4919156087324273194L |
net.sf.basedb.info.AnnotationInfo | ||
---|---|---|
private static final long |
serialVersionUID |
1098477223071956298L |
net.sf.basedb.info.AnnotationTypeInfo | ||
---|---|---|
private static final long |
serialVersionUID |
4294524681521272236L |
net.sf.basedb.info.ArrayDesignInfo | ||
---|---|---|
private static final long |
serialVersionUID |
5869031159593261755L |
net.sf.basedb.info.BioAssaySetInfo | ||
---|---|---|
private static final long |
serialVersionUID |
-1192040975292178464L |
net.sf.basedb.info.DataFileTypeInfo | ||
---|---|---|
private static final long |
serialVersionUID |
4331580958109079719L |
net.sf.basedb.info.ExperimentInfo | ||
---|---|---|
private static final long |
serialVersionUID |
7973320584668351841L |
net.sf.basedb.info.ExtendedPropertyInfo | ||
---|---|---|
private static final long |
serialVersionUID |
970921289373893596L |
net.sf.basedb.info.ProjectInfo | ||
---|---|---|
private static final long |
serialVersionUID |
-4415516272028020474L |
net.sf.basedb.info.RawBioAssayInfo | ||
---|---|---|
private static final long |
serialVersionUID |
2573863131262198133L |
net.sf.basedb.info.ReporterListInfo | ||
---|---|---|
private static final long |
serialVersionUID |
1073954178570174107L |
net.sf.basedb.info.VersionInfo | ||
---|---|---|
private static final long |
serialVersionUID |
9189853948028180946L |
net.sf.basedb.plugins.AbstractFlatFileImporter | ||
---|---|---|
protected static final String |
CHARSET |
"charset" |
protected static final String |
DECIMAL_SEPARATOR |
"decimalSeparator" |
net.sf.basedb.plugins.AnnotationFlatFileImporter | ||
---|---|---|
private static final String |
CONFIGURE_IMPORT |
"configure_import" |
private static final String |
CONFIGURE_MAPPING |
"configure_mapping" |
net.sf.basedb.plugins.Base1PluginExecuter | ||
---|---|---|
private static final String |
COMMAND_MANUAL_CONFIG |
"COMMAND_MANUAL_CONFIG" |
net.sf.basedb.plugins.BaseFileExporterPlugin | ||
---|---|---|
private static final String |
FORMAT_BASEFILE_MATRIX |
"matrix" |
private static final String |
FORMAT_BASEFILE_SERIAL |
"serial" |
public static final String |
PARAMETER_FILEFORMAT |
"fileformat" |
net.sf.basedb.plugins.BfsExporterPlugin | ||
---|---|---|
public static final String |
PARAMETER_FILEFORMAT |
"fileformat" |
public static final String |
PARAMETER_FILENAMEGENERATOR |
"filenamegenerator" |
net.sf.basedb.plugins.BioAssaySetExporter | ||
---|---|---|
private static final String |
COMMAND_CONFIGURE_BASEFILE |
"configure_basefile" |
private static final String |
FORMAT_BASEFILE_MATRIX |
"basefile.matrix" |
private static final String |
FORMAT_BASEFILE_SERIAL |
"basefile.serial" |
private static final String |
FORMAT_MEV_TDMS |
"mev.tdms" |
private static final String |
FORMAT_PLAIN_MATRIX |
"plain.matrix" |
net.sf.basedb.plugins.net.sf.basedb.plugins.BioAssaySetExporter.QueryItemTitleComparator | ||
---|---|---|
private static final long |
serialVersionUID |
-8346005967614706492L |
net.sf.basedb.plugins.HelpImporter | ||
---|---|---|
private static final String |
dtdFileName |
"helpfile.dtd" |
net.sf.basedb.plugins.PluginConfigurationImporter | ||
---|---|---|
private static final String |
COMMAND_SELECT_CONFIGURATIONS |
"select_configurations" |
private static final String |
dtdFileName |
"plugin-configuration-file.dtd" |
net.sf.basedb.plugins.RawDataFlatFileImporter | ||
---|---|---|
public static final String |
COMMAND_CONFIGURE_PARSER |
"config_parser" |
net.sf.basedb.plugins.batchimport.AbstractItemImporter<I extends BasicItem> | ||
---|---|---|
private static final String |
CONFIGURE_OPTIONS |
"configure_options" |
net.sf.basedb.plugins.executor.ExternalProgramExecutor | ||
---|---|---|
private static final String |
COMMAND_CONFIGURE_EXTERNAL_PARAMETERS |
"CREATE_EXTERNAL_PARAMETERS" |
public static final String |
NAMESPACE_EXPORTER |
"exporter" |
public static final String |
NAMESPACE_EXTERNAL |
"external" |
public static final String |
NAMESPACE_IMPORTER |
"importer" |
public static final String |
PARAMETER_DEBUG_MODE |
"debugMode" |
public static final String |
PARAMETER_EXPORTER_CLASS |
"exporterClass" |
public static final String |
PARAMETER_EXTERNAL_CMDLINE |
"externalProgramCmdLine" |
public static final String |
PARAMETER_EXTERNAL_PARAMETERS |
"externalParameters" |
public static final String |
PARAMETER_EXTERNAL_PATH |
"externalProgramPath" |
public static final String |
PARAMETER_IMPORTER_CLASS |
"importerClass" |
public static final String |
PARAMETER_NUM_CHANNELS |
"numChannels" |
public static final String |
PARAMETER_RAW_DATA_TYPE |
"rawDataType" |
public static final String |
PARAMETER_SOURCE_BIOASSSAYSET |
"source" |
public static final String |
PARAMETER_SOURCE_TRANSFORM |
"sourceTransform" |
net.sf.basedb.plugins.executor.IOSupport | ||
---|---|---|
public static final String |
COMMAND_CONFIGURE_IO_JOB |
"CONFIG_IO_JOB" |
public static final String |
COMMAND_CONFIGURE_IO_PLUGIN |
"CONFIG_IO_PLUGIN" |
public static final String |
COMMAND_EXECUTE_IO_JOB |
"EXECUTE_IO_JOB" |
net.sf.basedb.plugins.util.Parameters | ||
---|---|---|
public static final String |
CHARSET_PARAMETER |
"charset" |
public static final String |
CHILD_DESCRIPTION |
"childDescription" |
public static final String |
CHILD_NAME |
"childName" |
public static final String |
DATE_FORMAT_ERROR |
"dateFormatError" |
public static final String |
DATE_FORMAT_PARAMETER |
"dateFormat" |
public static final String |
DECIMAL_SEPARATOR_PARAMETER |
"decimalSeparator" |
public static final String |
DEFAULT_ERROR |
"defaultError" |
public static final String |
DRY_RUN_PARAMETER |
"dryRun" |
public static final String |
ERROR_SECTION |
"errorSection" |
public static final String |
INVALID_USE_OF_NULL_ERROR |
"invalidUseOfNullError" |
public static final String |
LOGFILE_PARAMETER |
"logFile" |
public static final String |
NUMBER_FORMAT_ERROR |
"numberFormatError" |
public static final String |
NUMBER_OUT_OF_RANGE_ERROR |
"numberOutOfRangeError" |
public static final String |
STRING_TOO_LONG_ERROR |
"stringTooLongError" |
public static final String |
TIMESTAMP_FORMAT_PARAMETER |
"timestampFormat" |
public static final String |
TRANSFORMATION_NAME |
"transformationName" |
net.sf.basedb.util.Enumeration<K,V> | ||
---|---|---|
private static final long |
serialVersionUID |
1222952912319368574L |
net.sf.basedb.util.FileUtil | ||
---|---|---|
private static final int |
BUFFER_SIZE |
512 |
net.sf.basedb.util.NameableComparator<T extends Nameable> | ||
---|---|---|
private static final long |
serialVersionUID |
-845369301970627620L |
net.sf.basedb.util.PluginInfo | ||
---|---|---|
private static final String |
configurationImportFile |
"META-INF/base-configurations.xml" |
private static final String |
xmlFile |
"META-INF/base-plugins.xml" |
net.sf.basedb.util.ToStringComparator<T> | ||
---|---|---|
private static final long |
serialVersionUID |
-4125738438373368082L |
net.sf.basedb.util.Values | ||
---|---|---|
private static final long |
GB |
1073741824L |
private static final long |
kB |
1024L |
private static final long |
MB |
1048576L |
net.sf.basedb.util.XMLUtil | ||
---|---|---|
private static final String |
xmlParserClass |
"org.apache.xerces.parsers.SAXParser" |
net.sf.basedb.util.bfs.MetadataWriter | ||
---|---|---|
public static final String |
BOF_MARKER |
"BFSformat" |
net.sf.basedb.util.export.spotdata.MatrixBaseFileExporter | ||
---|---|---|
public static final String |
SUBTYPE |
"matrix" |
net.sf.basedb.util.export.spotdata.MatrixBfsExporter | ||
---|---|---|
public static final String |
SUBTYPE |
"matrix" |
net.sf.basedb.util.export.spotdata.SerialBaseFileExporter | ||
---|---|---|
public static final String |
SUBTYPE |
"serial" |
net.sf.basedb.util.export.spotdata.SerialBfsExporter | ||
---|---|---|
public static final String |
SUBTYPE |
"serial" |
net.sf.basedb.util.extensions.xml.XmlLoader | ||
---|---|---|
private static final String |
namespace |
"http://base.thep.lu.se/extensions.xsd" |
net.sf.basedb.util.formatter.PrefixSuffixFormatter<T> | ||
---|---|---|
public static final char |
NBSP |
160 |
net.sf.basedb.util.importer.spotdata.FirstPassSectionSpotsParser | ||
---|---|---|
public static final String |
SECTION |
"spots" |
net.sf.basedb.util.importer.spotdata.MAParser | ||
---|---|---|
private static final String |
aColumn |
"l10intgmean1_2" |
private static final String |
mColumn |
"l2ratio1_2" |
net.sf.basedb.util.jep.net.sf.basedb.util.jep.FunctionSafeJep.SafeFunctionTable | ||
---|---|---|
private static final long |
serialVersionUID |
4430148600636575401L |
net.sf.basedb.util.jep.net.sf.basedb.util.jep.FunctionSafeJep.UnknownFunction | ||
---|---|---|
private static final long |
serialVersionUID |
8761224046553039046L |
net.sf.basedb.util.overview.OverviewUtil | ||
---|---|---|
private static final String |
presetsSetting |
"experiment.overview.presets" |
net.sf.basedb.util.overview.loader.BasicItemNodeLoader<I extends BasicItem> | ||
---|---|---|
public static final boolean |
ALLOW_ROOT_NODE |
true |
public static final boolean |
DENY_ROOT_NODE |
false |
net.sf.basedb.util.parser.FlatFileParser | ||
---|---|---|
public static final int |
DEFAULT_MAX_UNKNOWN_LINES |
100 |
net.sf.basedb.util.plot.net.sf.basedb.util.plot.HistogramPlot.HistogramBin | ||
---|---|---|
private static final long |
serialVersionUID |
513573632731346456L |
net.sf.basedb.util.plot.net.sf.basedb.util.plot.HistogramPlot.HistogramDataset | ||
---|---|---|
private static final long |
serialVersionUID |
-515696571729019122L |
net.sf.basedb.util.plot.net.sf.basedb.util.plot.HistogramPlot.HistogramSeries | ||
---|---|---|
private static final long |
serialVersionUID |
8540300441782223733L |
net.sf.basedb.util.zip.AbstractFileUnpacker | ||
---|---|---|
protected static final String |
OVERWRITE |
"overwrite" |
protected static final String |
UNPACK_DIRECTORY |
"unpackDirectory" |
protected static final String |
ZIP_FILE |
"zipFile" |
net.sf.basedb.util.zip.TarUtil | ||
---|---|---|
public static final String |
LONG_LINK_NAME |
"././@LongLink" |
public static final int |
MAX_NAME_LENGTH |
100 |
net.sf.basedb.ws.server.BioAssaySetService | ||
---|---|---|
private static final String |
MATRIX_BASEFILE |
"Matrix BASEfile" |
private static final String |
MEV |
"Mev file" |
private static final String |
SERIAL_BASEFILE |
"Serial BASEfile" |
|
2.17.2: 2011-06-17 | ||||||||
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