Opened 17 years ago

Closed 17 years ago

#647 closed defect (fixed)

Base1PluginExecter fails when importing data

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: major Milestone: BASE 2.4
Component: coreplugins Version:
Keywords: Cc:

Description

Used the Base1NullPlugin for testing. Get the following stacktrace when importing data 

net.sf.basedb.core.InvalidDataException: The source datacube Data cube[id=1] is the same as this bioassaysets datacube: Data cube[id=1]
at net.sf.basedb.core.BioAssaySet.newBioAssay(BioAssaySet.java:690)
at net.sf.basedb.plugins.Base1PluginExecuter.importData(Base1PluginExecuter.java:1297)
at net.sf.basedb.plugins.Base1PluginExecuter.run(Base1PluginExecuter.java:680)
at net.sf.basedb.core.PluginExecutionRequest.invoke(PluginExecutionRequest.java:88)
at net.sf.basedb.core.InternalJobQueue$JobRunner.run(InternalJobQueue.java:420)
at java.lang.Thread.run(Thread.java:619)

Seems like the plug-in tries to import a multi-parent bioassayset to the same datacube. This is not supported. A new datacube must be used.

Change History (2)

comment:1 by Nicklas Nordborg, 17 years ago

Owner: changed from everyone to Nicklas Nordborg
Status: new → assigned

comment:2 by Nicklas Nordborg, 17 years ago

Resolution: → fixed
Status: assigned → closed

(In [3505]) Fixes #632, #622, #643, #644, #645, #646, #647

Note: See TracTickets for help on using tickets.