Package net.sf.basedb.core

Class BioMaterialEventSource

java.lang.Object
net.sf.basedb.core.BioMaterialEventSource
All Implemented Interfaces:
AccessControlled
public class BioMaterialEventSource extends Object implements AccessControlled
Class for holding information about a parent biomaterial that was used in an event that created a child biomaterial or a physical bioassay. Each event may only include the same parent biomaterial once. Permission-wise the information belongs to the BioMaterialEvent and the user has the same permissions as for the event.
Since:
3.0
Author:
Nicklas
Last modified
$Date: 2014-11-17 08:41:18 +0100 (må, 17 nov 2014) $

  • Field Details

  • Constructor Details

  • Method Details

    • getQuery

      public static SpecialQuery<BioMaterialEventSource> getQuery(BioMaterialEvent event)
      Get a query returning source information for a given (creation) event. The event parameter can be null, but the query will then contain a named parameter (event) that must be set before the query is executed.
      Parameters:
      event - An event or null
      Since:
      3.1

    • getQuery

      public static SpecialQuery<BioMaterialEventSource> getQuery(BioMaterial source)
      Get a query returning event information where a given biomaterial has been used as a source. The parent parameter can be null, but the query will then contain a named parameter (source) that must be set before the query is executed.
      Parameters:
      source - An biomaterial or null
      Since:
      3.1

    • hasPermission

      public boolean hasPermission(Permission permission)
      Description copied from interface: AccessControlled
      Check if the logged in user has the desired permission on the item.
      Specified by:
      hasPermission in interface AccessControlled
      Parameters:
      permission - The permission to check if the user has.
      Returns:
      TRUE if the user has the permission, FALSE otherwise

    • checkPermission

      public void checkPermission(Permission permission) throws PermissionDeniedException
      Description copied from interface: AccessControlled
      Check if the logged in user has the desired permission on the item, otherwise throw an exception.
      Specified by:
      checkPermission in interface AccessControlled
      Parameters:
      permission - Permission the user should have.
      Throws:
      PermissionDeniedException - If the user doesn't have the requested permission

    • getPermissions

      public Set<Permission> getPermissions()
      Description copied from interface: AccessControlled
      Get the logged in user's permissions on the item.
      Specified by:
      getPermissions in interface AccessControlled

    • getEvent

      public BioMaterialEvent getEvent()
      Get the event that this information belongs to.

    • getBioMaterial

      public BioMaterial getBioMaterial()
      Get the biomaterial that was used as a source in this event.

    • getUsedQuantity

      public Float getUsedQuantity()
      Get the quantity that was used from the source biomaterial by the event.
      Returns:
      A float, or null if not known

    • setUsedQuantity

      public void setUsedQuantity(Float usedQuantity)
      Set the quantity that was used from the source biomaterial by the event. This method call is ignored if the source biomaterial is not a MeasuredBioMaterial.
      Parameters:
      usedQuantity - The used quantity or null if not known

    • getPosition

      public int getPosition()
      Get the position that the source biomaterial was used on in the event.

    • setPosition

      public void setPosition(int position)