BASE Features
- MIAME compliant
- Tab2MAGE import/export plug-in ArrayExpress compliant
- Projects, Sharing, and Access Control Management
- Array LIMS
- Biomaterial LIMS
- Many microarray data formats supported
- Affymetrix
- Agilent
- GenePix
- Illumina support
- Custom formats supportive through customizable import plug-ins
- Extensibility via Enhanced plug-in API
- Annotation Customization via Annotation Type/Categories mechanism
- Migration module from BASE 1.2.17 to BASE 2.6, followed by BASE 2.6 to latest upgrade.
- Analysis tools
- Lowess Normalization
- Compatible with BASE 1 plug-ins
- Integration with TIGR MEV through Java Web Start
- Get data using WebServices
Screenshots
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| Login screen | Experiment Overview | Experiment Overview Options | Experiment Explorer |
 |  |  | 
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| Bioassayset Plot | Bioassayset Histogram Plot | Dynamic columns | Open MeV using WebStart |
Attachments
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login_screen.jpg
(301.4 KB) - added by enell
2 years ago.
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experiment_overview_options.jpg
(157.4 KB) - added by enell
2 years ago.
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tmev.jpg
(210.4 KB) - added by enell
2 years ago.
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dynamic_columns.jpg
(213.2 KB) - added by johan
2 years ago.
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experiment_explorer.jpg
(487.0 KB) - added by johan
2 years ago.
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bioassayset_histplot.jpg
(229.7 KB) - added by johan
2 years ago.
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experiment_overview.jpg
(0.7 MB) - added by johan
2 years ago.
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bioassayset_plot.jpg
(272.7 KB) - added by johan
2 years ago.
