Opened 4 months ago

Closed 3 months ago

#2108 closed enhancement (fixed)

Add support for setting a job on raw bioassays with file-only platform

Reported by: nicklas Owned by: nicklas
Priority: major Milestone: BASE 3.11.3
Component: core Version:
Keywords: Cc:

Description

Currently, the only way to set a job on a raw bioassay is to call the RawBioAssay.getRawDataBatcher() method. This requires that the raw data type used is a type that can be imported to the database. The RawBioAssay.getJob() documentation also states: Get the job that imported data to this raw bioassay.

It would be nice to widen the possibility to link a job and raw bioassay since file-only raw data types are typically also created as a result of running a job.

I suggest that a setJob() method is added to the RawBioAssay class, the documentation is updated and that relevant places in the web interface are updated to reflect that the job may be something else than an "import job" (the web interface has a section "Raw data import" which lists the job information).

Change History (4)

comment:1 Changed 4 months ago by nicklas

  • Owner changed from everyone to nicklas
  • Status changed from new to assigned

comment:2 Changed 4 months ago by nicklas

(In [7441]) References #2108: Add support for setting a job on raw bioassays with file-only platform

Added the RawBioAssay.setJob() method.

comment:3 Changed 4 months ago by nicklas

(In [7442]) References #2108: Add support for setting a job on raw bioassays with file-only platform

Changes to the view and list pages for raw bioassays and derived bioassays.

  • Added "Job type" to the list pages since it may make sense to filter on this property.
  • The view pages for raw bioassays and derived bioassay now display job information in the same way. Some things have been re-ordered or added to one or both pages.

comment:4 Changed 3 months ago by nicklas

  • Resolution set to fixed
  • Status changed from assigned to closed
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