Opened 11 years ago

Closed 11 years ago

Last modified 11 years ago

#1310 closed enhancement (fixed)

Annotations for protocols

Reported by: base Owned by: everyone
Priority: major Milestone: BASE 2.12
Component: core Version:
Keywords: protocol annotations Cc:

Description

Could also protocols be annotatable? That will help to store some more 'programaticaly accessible' information on them. I also have a feeling that this is possible/required in MGED Ontology (or some other microarray standard?). More on this in mailing list thread: http://www.mail-archive.com/basedb-devel@lists.sourceforge.net/msg00360.html

Attachments (1)

patch-4934.diff (9.2 KB) - added by base 11 years ago.
patch for making protocols annotatable

Download all attachments as: .zip

Change History (5)

Changed 11 years ago by base

Attachment: patch-4934.diff added

patch for making protocols annotatable

comment:1 Changed 11 years ago by base

I have uploaded a patch. It contains two small changes in java code and some more in JSP pages related to protocols. I tested it only on a fresh database (used initdb.sh), so schema version (NEW_SCHEMA_VERSION in Install class) should be increased to enable automatic db update.

I hope I haven't missed to many things and this will be a useful contribution, Pawel

comment:2 Changed 11 years ago by Nicklas Nordborg

Milestone: BASE 2.12

comment:3 Changed 11 years ago by Nicklas Nordborg

Resolution: fixed
Status: newclosed

(In [4938]) Fixes #1310: Annotations for protocols

The code worked perfectly right away. Thanks Pawel!

comment:4 Changed 11 years ago by Nicklas Nordborg

(In [4939]) References #1310: Annotations for protocols

Show/validate protocol annotations in the experiment overview.

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