Opened 15 years ago
Closed 15 years ago
#942 closed defect (fixed)
BioAssaySetExporter should export ratio values instead of log-ratio for MeV-format
Reported by: | Nicklas Nordborg | Owned by: | everyone |
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Priority: | major | Milestone: | BASE 2.6.1 |
Component: | coreplugins | Version: | |
Keywords: | Cc: |
Description
MeV expects ratio-values. Using the "Launch MeV" tool in BASE loads the bioassayset data into MeV with java webstart. The data export sends the log-ratio values to MeV but MeV seems to expect ratio-values. About half of the spots are grayed out in MeV because the have a negative "ratio". Clicking on a spot opens the "Spot information" (see attached file) dialog which reveals that the "Ratio" value is the same as the log-ratio that was exported from BASE.
Attachments (1)
Change History (2)
Changed 15 years ago by
comment:1 Changed 15 years ago by
Resolution: | → fixed |
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Status: | new → closed |
(In [4165]) Fixes #942: BioAssaySetExporter? should export ratio values instead of log-ratio for MeV-format
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MeV: Spot information