Add more web services methods

[Nicklas Nordborg]

Some minor additions to make existing services more complete

• Implement a getById() method for each service, for example: ExperimentService?.getById()
• Implement a method that lists items for each service, for example: RawBioAssayService?.getRawBioAssays()

New services for reporters and reporter lists that can:

• give information about extended properties for reporters
• export reporter information (as a tab-separated text file) for the reporters in a reporter list
• list reporter lists within an experiment: ExperimentService?.getReporterLists()

New services for annotations that can:

• list experimental factors: ExperimentService?.getExperimentalFactors()
• get annotation values for a raw bioassay

[Nicklas Nordborg]

(In [3973]) References #827: Add more web services methods

• Added services to get experimental factors and annotation values for annotatable items
• Added methods in TestExperiment? for testing experimental factors
• Changed methods in TestAnnotation? to allow annotating any item

[Nicklas Nordborg]

(In [3974]) References #827: Add more web services methods

Added Transferable and ToTransferable? to make it easier to write generic code for populating classes that are going to be transfered with web services.

[Nicklas Nordborg]

(In [3975]) References #827. Updated javadoc related to last check-in

[Martin Svensson]

(In [3976]) References #827 Added ExperimentService?.getReporterLists().

[Nicklas Nordborg]

(In [3977]) References #827: Add more web services methods

Added AnnotationTypeService? that can be used to find available annotation types.

[Martin Svensson]

(In [3978]) References #827 Created ReporterService? and a method to get the extended properties for reporters.

[Nicklas Nordborg]

(In [3983]) References #827: Add more web services methods

• Added getById() method to services that didn't have it
• Added listing/query method to services that didn't have one

[Nicklas Nordborg]

(In [3984]) References #827: Add more web services methods

Added example code for downloading raw data files

[Martin Svensson]

(In [3991]) Fixes #827 Reporters can now be exported through web services. Two new methods in ReporterService? are added, one that exports reporters in a reporters list and one that exports all reports. The reporters are exported to a tab-separated text file.

[Martin Svensson]

(In [3993]) References #827 Updated some javadoc to the new methods.