#401 closed defect (fixed)
Filter plugin - failed to correctly apply filter on M values
Reported by: | Johan Vallon-Christersson | Owned by: | Nicklas Nordborg |
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Priority: | major | Milestone: | BASE 2.0.3 |
Component: | coreplugins | Version: | |
Keywords: | Cc: |
Description
When applying a filter to create a filtered bioassay set using the following parameters:
Plugin & parameters Plugin Formula filter plugin Keep spots 4 Filter expression log2(ch(1) / ch(2)) > 1
Spots with M values < 1 are kept.
Change History (3)
comment:1 Changed 17 years ago by
Component: | web → coreplugins |
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Owner: | changed from Johan Enell to Nicklas Nordborg |
Status: | new → assigned |
comment:2 Changed 17 years ago by
Resolution: | → fixed |
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Status: | assigned → closed |
comment:3 Changed 17 years ago by
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This seems certainly to be true. The buggy code is located in the includeSpot() method of IncludeExcludeFilter?.java. This method doesn't have enough information to determine if a spot should be included or not and the current code is a bit strange.