Opened 17 years ago
Closed 16 years ago
#372 closed enhancement (fixed)
Check Affymetrix CEL files vs Affymetrix Array Design during file upload
| Reported by: | Owned by: | Nicklas Nordborg | |
|---|---|---|---|
| Priority: | major | Milestone: | BASE 2.4 |
| Component: | core | Version: | |
| Keywords: | CEL files and ArrayDesign | Cc: |
Description
CEL files contains information about the ArrayDesign? used to generated it. This information could be used to:
- either autoselect the ArrayDesign? (CDF file) when creating a new Raw bioassay
- or check for consistency between CEL file and ArrayDesign? selection
This check would be beneficial to avoid downstream Data manipulation failures (eg when using the RMA plugin)
Change History (9)
comment:1 Changed 17 years ago by
| Component: | web → core |
|---|---|
| Milestone: | BASE 2.1 → BASE 2.x+ |
comment:2 Changed 16 years ago by
comment:3 Changed 16 years ago by
When the verification has been implemented it should no longer be possible to change the CDF file of an array design since that would undo the verification which some analysis plugin may depend on.
comment:4 Changed 16 years ago by
| Owner: | changed from base to Jari Häkkinen |
|---|
comment:6 Changed 16 years ago by
| Milestone: | BASE 2.x+ → BASE 2.4 |
|---|
comment:8 Changed 16 years ago by
| Owner: | changed from Jari Häkkinen to Nicklas Nordborg |
|---|---|
| Status: | new → assigned |
comment:9 Changed 16 years ago by
| Resolution: | → fixed |
|---|---|
| Status: | assigned → closed |
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The failure to establish the proper connection with cel's and cdf's affectes the RMAplugin: http://baseplugins.thep.lu.se/ticket/19