Opened 18 years ago

Closed 18 years ago

#340 closed task (fixed)

Experiment validation tool

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: minor Milestone: BASE 2.2
Component: coreplugins Version:
Keywords: Cc:

Description

The core is very loose when it comes to checking the structure of linked items. For example it doesn't care about the number of labeled extracts that are linked to a hybridization or if the labels are different. A sanity check tool would for a project and/or experiment check a lot of things and output a list of warnings. Here are some more example of what could be checked:

  • The project defaults are used (see #334)
  • Annotations have been specified for all items
  • Inherited annotations are from parent items

The validation tool may have some common points with #262: Overview of an experiment

Change History (9)

comment:1 by Jari Häkkinen, 18 years ago

Milestone: BASE 2.x+ → BASE 2.2

comment:2 by Nicklas Nordborg, 18 years ago

Priority: major → minor

comment:3 by Nicklas Nordborg, 18 years ago

Status: new → assigned

comment:4 by Nicklas Nordborg, 18 years ago

(In [3024]) References #262 and #340. Added draft specification

comment:5 by Nicklas Nordborg, 18 years ago

(In [3033]) References #262, #340: First prototype for experiment overview. Reads most of an experiment. Limited validation. No presets. No detailed information about an error/warning.

comment:6 by Nicklas Nordborg, 18 years ago

(In [3045]) References #262 and #340. The overview and validation is now complete. Still missing possibility to save validation options as presets.

comment:7 by Nicklas Nordborg, 18 years ago

(In [3051]) References #262 and #340: Some minor improvements and fixes

comment:8 by Nicklas Nordborg, 18 years ago

(In [3062]) References #262 and #340: Added possibility to save preset for validation options. Needs a bit more testing.

comment:9 by Nicklas Nordborg, 18 years ago

Resolution: → fixed
Status: assigned → closed
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