Opened 15 years ago

Closed 15 years ago

#340 closed task (fixed)

Experiment validation tool

Reported by: Nicklas Nordborg Owned by: Nicklas Nordborg
Priority: minor Milestone: BASE 2.2
Component: coreplugins Version:
Keywords: Cc:

Description

The core is very loose when it comes to checking the structure of linked items. For example it doesn't care about the number of labeled extracts that are linked to a hybridization or if the labels are different. A sanity check tool would for a project and/or experiment check a lot of things and output a list of warnings. Here are some more example of what could be checked:

  • The project defaults are used (see #334)
  • Annotations have been specified for all items
  • Inherited annotations are from parent items

The validation tool may have some common points with #262: Overview of an experiment

Change History (9)

comment:1 Changed 15 years ago by Jari Häkkinen

Milestone: BASE 2.x+BASE 2.2

comment:2 Changed 15 years ago by Nicklas Nordborg

Priority: majorminor

comment:3 Changed 15 years ago by Nicklas Nordborg

Status: newassigned

comment:4 Changed 15 years ago by Nicklas Nordborg

(In [3024]) References #262 and #340. Added draft specification

comment:5 Changed 15 years ago by Nicklas Nordborg

(In [3033]) References #262, #340: First prototype for experiment overview. Reads most of an experiment. Limited validation. No presets. No detailed information about an error/warning.

comment:6 Changed 15 years ago by Nicklas Nordborg

(In [3045]) References #262 and #340. The overview and validation is now complete. Still missing possibility to save validation options as presets.

comment:7 Changed 15 years ago by Nicklas Nordborg

(In [3051]) References #262 and #340: Some minor improvements and fixes

comment:8 Changed 15 years ago by Nicklas Nordborg

(In [3062]) References #262 and #340: Added possibility to save preset for validation options. Needs a bit more testing.

comment:9 Changed 15 years ago by Nicklas Nordborg

Resolution: fixed
Status: assignedclosed
Note: See TracTickets for help on using tickets.