Raw data type lookup by name in rawbioassay batch importer
Plugin batchimporting rawbioassays is using raw data type ID to find the right raw data type. I believe it does it only for Generic platform because it does not complain about Illumina platform's raw data type's provided by name (Illumina Bead Summary (IBS)). The ID of raw data type is not accessible in BASE GUI so it is difficult for users to guess it (if it is different than name). Could the plugin search for the name first and afterwards for the ID?
Change History
(4)
| Owner: |
changed from everyone to Nicklas Nordborg
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| Status: |
new → assigned
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| Summary: |
Rawbioassay batch import plugin using only raw data type ID → Raw data type lookup by name in rawbioassay batch importer
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| Resolution: |
→ fixed
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| Status: |
assigned → closed
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I guess we could search for the names also, using the same rules as when other items are searched (eg. handling for duplicate matches, etc.) The reason that it seems to work for Illumina is that a search is never performed in this case. The Illumina platform is locked to a specific raw data type and the importer will simply ignore the raw data type column in the file.