Opened 16 years ago
Closed 16 years ago
#1167 closed defect (fixed)
Base1PluginExecutor should handle reporter-id=0 as null in some cases
Reported by: | Nicklas Nordborg | Owned by: | Nicklas Nordborg |
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Priority: | major | Milestone: | BASE 2.9 |
Component: | coreplugins | Version: | |
Keywords: | Cc: |
Description
There is a problem with some BASE1 plug-ins when a bioassay set has spots without a reporter (eg the reporter is null). When the BioAssaySetExporter exports data for spots that has a null reporter the column is empty.
Eg.
40076 3752.0 5588.0 47 40077 536225 RP11-381L15 1184.0 2033.0 47
Some BASE1 plug-ins returns the result with a 0 in the corresponding column.
40079 0 6813.3 6835.66 47 40300 233476 RP11-242P12 7000.09 6676.78 47
The proposed solution is to convert the 0 to a null when importing the processed data if:
- There is no reporter with id=0 in the export. This is probably always true since IDs usually starts at '1'.
- There was spots data without reporters in the export.
Change History (2)
comment:1 by , 16 years ago
Owner: | changed from | to
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Status: | new → assigned |
comment:2 by , 16 years ago
Resolution: | → fixed |
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Status: | assigned → closed |
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(In [4631]) Fixes #1167: Base1PluginExecutor should handle reporter-id=0 as null in some cases
Test case converts all empty reporter values to 0.