Class BioSourceValidator

All Implemented Interfaces:

public class BioSourceValidator
extends NameableNodeValidator<BioSource>
Validator implementation for biosources. Validation rules:
Last modified
$Date: 2011-08-11 11:09:06 +0200 (to, 11 aug 2011) $
  • Constructor Details

    • BioSourceValidator

      public BioSourceValidator()
  • Method Details

    • postValidate

      public void postValidate​(DbControl dc, OverviewContext context, Node node, Node parentNode)
      Description copied from class: BasicNodeValidator
      Do nothing. Subclasses should override this method if they need more validation for an existing and accessible item.
      Specified by:
      postValidate in interface NodeValidator<BioSource>
      postValidate in class NameableNodeValidator<BioSource>
      dc - A DbControl to use if the validation needs to access the database
      context - The current overview context
      node - The node object that represents item
      parentNode - The parent node that is linked with the item
    • getMissingItemFix

      protected Fix getMissingItemFix​(DbControl dc, Node sampleNode)
      Description copied from class: BasicNodeValidator
      Subclasses should override this method if they have a suggessted fix for a missing item problem. The default implementation does nothing, but the following template may be usable by most subclasses:
                      new Fix("Add item to parent", parentNode.getItem())
      Specified by:
      getMissingItemFix in class BasicNodeValidator<BioSource>
      Suggested fix is to add a biosource to the parent sample.