Package net.sf.basedb.util.overview.loader

Class BioPlateLoader

java.lang.Object

net.sf.basedb.util.overview.loader.AbstractNodeLoader<I>

net.sf.basedb.util.overview.loader.BasicItemNodeLoader<BioPlate>

net.sf.basedb.util.overview.loader.BioPlateLoader

All Implemented Interfaces:

NodeLoader<BioPlate>

public class BioPlateLoader
extends BasicItemNodeLoader<BioPlate>

Node loader implementation for bioplates. Bioplates are loaded as root nodes, or as property nodes of a biomaterial or bioplate event. The forward-loading direction goes to the biomaterial that is located on the plate. The reverse direction is not loading anything.

Since:

3.2

Author:

nicklas

Field Summary

Fields inherited from class net.sf.basedb.util.overview.loader.BasicItemNodeLoader

ALLOW_ROOT_NODE, allowAsRootNode, DENY_ROOT_NODE, factoryKey, nameGenerator

Constructor Summary

Constructors

Constructor	Description
BioPlateLoader()

Method Summary

Modifier and Type	Method	Description
private Node	createPropertyNode(BioPlateEvent event, DbControl dc, OverviewContext context, Node parentNode)	Create a property node(s) when the parent item is a bioplate event.
Node	createPropertyNode(DbControl dc, OverviewContext context, Node parentNode)	Create a bioplate property node from a biomaterial that is located on a plate or property nodes for each bioplate that is part of a bioplate event.
private Node	createPropertyNode(MeasuredBioMaterial bioMaterial, DbControl dc, OverviewContext context, Node parentNode)	Create a property node when the parent item is a biomaterial.
protected void	loadForwardChildNodes(DbControl dc, OverviewContext context, Node plateNode)	Loads the non-empty biowells on the bioplate.
protected void	loadPropertyChildNodes(DbControl dc, OverviewContext context, Node plateNode)	Load the freezer node.

Methods inherited from class net.sf.basedb.util.overview.loader.BasicItemNodeLoader

createItemNode, createRootNode, getNodeFactory, getNodeFactory, getNodeLoader, getNodeLoaderFactory, getNodeNameGenerator, getNodeValidator, getNodeValidatorFactory, postValidateFolder

Methods inherited from class net.sf.basedb.util.overview.loader.AbstractNodeLoader

createForwardNode, createReverseNode, loadChildNodes, loadChildNodesOfFolderNode, loadChildNodesOfItemNode, loadReverseChildNodes

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

BioPlateLoader

public BioPlateLoader()

Method Details

createPropertyNode

public Node createPropertyNode(DbControl dc,
 OverviewContext context,
 Node parentNode)

Create a bioplate property node from a biomaterial that is located on a plate or property nodes for each bioplate that is part of a bioplate event. If the parent node is a bioplate event the loader only create new nodes for bioplates that are different from the grandparent (which should be one of the bioplates in the event).

Specified by:

createPropertyNode in interface NodeLoader<BioPlate>

Overrides:

createPropertyNode in class AbstractNodeLoader<BioPlate>

Parameters:

dc - The DbControl to use for database access

context - The overview context

parentNode - The parent node

Returns:

A bioplate node, or null if the biomaterial is not located on a plate

loadForwardChildNodes

protected void loadForwardChildNodes(DbControl dc,
 OverviewContext context,
 Node plateNode)

Loads the non-empty biowells on the bioplate.

Overrides:

loadForwardChildNodes in class AbstractNodeLoader<BioPlate>

See Also:

• BioWellLoader.createForwardNode(DbControl, OverviewContext, Node)

loadPropertyChildNodes

protected void loadPropertyChildNodes(DbControl dc,
 OverviewContext context,
 Node plateNode)

Load the freezer node.

Overrides:

loadPropertyChildNodes in class AbstractNodeLoader<BioPlate>

See Also:

• HardwareLoader.createPropertyNode(DbControl, OverviewContext, Node)

createPropertyNode

private Node createPropertyNode(MeasuredBioMaterial bioMaterial,
 DbControl dc,
 OverviewContext context,
 Node parentNode)

Create a property node when the parent item is a biomaterial.

createPropertyNode

private Node createPropertyNode(BioPlateEvent event,
 DbControl dc,
 OverviewContext context,
 Node parentNode)

Create a property node(s) when the parent item is a bioplate event. All participants in the events except the immediate parent (if any) are loaded as property nodes directly under that parent node (not using a folder node). Null is always returned.