Package net.sf.basedb.util.listable

Class PhysicalBioAssayToDerivedBioAssayTransformer

java.lang.Object

net.sf.basedb.util.listable.AbstractSourceItemTransformer

net.sf.basedb.util.listable.PhysicalBioAssayToDerivedBioAssayTransformer

All Implemented Interfaces:

SourceItemTransformer

public class PhysicalBioAssayToDerivedBioAssayTransformer
extends AbstractSourceItemTransformer

Source item transformer implementation that transform physical bioassay items to derived bioassays. This implementation transform to all derived bioassays that are descendants of the physical bioassays and may optionally limit the derived bioassays that are related to parent collected extracts.

Since:

3.5

Author:

Nicklas

Field Summary

Fields

Modifier and Type	Field	Description
private CollectExtracts	collectedExtracts

Constructor Summary

Constructors

Constructor	Description
PhysicalBioAssayToDerivedBioAssayTransformer()	Create a new physical bioassay to derived bioassay transformer.
PhysicalBioAssayToDerivedBioAssayTransformer(CollectExtracts collectedExtracts)	Create a new physical bioassay to derived bioassay transformer using the collected extracts to limit the returned items.

Method Summary

Modifier and Type	Method	Description
Set<Integer>	transform(TransformContext context, Set<Integer> source)	Transform the given set of source item ID:s into a set of target item ID:s

Methods inherited from class net.sf.basedb.util.listable.AbstractSourceItemTransformer

getSourceItemType, getTargetItemType, safeIdList

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

collectedExtracts

private CollectExtracts collectedExtracts

Constructor Details

PhysicalBioAssayToDerivedBioAssayTransformer

public PhysicalBioAssayToDerivedBioAssayTransformer()

Create a new physical bioassay to derived bioassay transformer.

PhysicalBioAssayToDerivedBioAssayTransformer

public PhysicalBioAssayToDerivedBioAssayTransformer(CollectExtracts collectedExtracts)

Create a new physical bioassay to derived bioassay transformer using the collected extracts to limit the returned items.

Method Details

transform

public Set<Integer> transform(TransformContext context,
Set<Integer> source)

Description copied from interface: SourceItemTransformer

Transform the given set of source item ID:s into a set of target item ID:s