Package net.sf.basedb.plugins

Class LowessNormalization.CallableWorker

java.lang.Object

net.sf.basedb.plugins.LowessNormalization.CallableWorker

All Implemented Interfaces:

Callable<List<LowessNormalization.SpotData>>

Enclosing class:

LowessNormalization

static class LowessNormalization.CallableWorker
extends Object
implements Callable<List<LowessNormalization.SpotData>>

Field Summary

Fields

Modifier and Type	Field	Description
private int	blockGroupSize
private final float	delta
private final float	fitFraction
private final List<LowessNormalization.SpotData>	in
private final int	iterations
private final MACalculator	mac

Constructor Summary

Constructors

Constructor	Description
CallableWorker(List<LowessNormalization.SpotData> in, MACalculator mac, float fitFraction, float delta, int iterations, int blockGroupSize)

Method Summary

Modifier and Type	Method	Description
List<LowessNormalization.SpotData>	call()
private boolean	normalize(List<LowessNormalization.SpotData> data, MACalculator mac)	Normalize the spot data.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

in

private final List<LowessNormalization.SpotData> in

mac

private final MACalculator mac

fitFraction

private final float fitFraction

delta

private final float delta

iterations

private final int iterations

blockGroupSize

private int blockGroupSize

Constructor Details

CallableWorker

CallableWorker(List<LowessNormalization.SpotData> in,
 MACalculator mac,
 float fitFraction,
 float delta,
 int iterations,
 int blockGroupSize)

Method Details

call

public List<LowessNormalization.SpotData> call()

Specified by:

call in interface Callable<List<LowessNormalization.SpotData>>

normalize

private boolean normalize(List<LowessNormalization.SpotData> data,
 MACalculator mac)

Normalize the spot data.

Returns:

TRUE if all was ok, FALSE if worker has been interrupted and should stop executing