Package net.sf.basedb.util.parser
Interface ConfigureByExample
- All Superinterfaces:
Plugin
- All Known Implementing Classes:
AbstractItemImporter
,AnnotationFlatFileImporter
,AnnotationTypeImporter
,AnyToAnyImporter
,ArrayBatchImporter
,ArrayDesignImporter
,ArraySlideImporter
,BioPlateImporter
,BioSourceImporter
,DerivedBioAssayImporter
,ExtractImporter
,FileImporter
,GtfReporterImporter
,GtfReporterMapImporter
,KitImporter
,PhysicalBioAssayImporter
,PlateFlatFileImporter
,RawBioAssayImporter
,RawDataFlatFileImporter
,ReporterFlatFileImporter
,ReporterMapFlatFileImporter
,SampleImporter
,TagImporter
This is a tagging interface for all plugins that use
the
FlatFileParser
and wants easier configuration
of the regular expressions used to parse the file.
The web interface checks for plugins that implements this interface
and create a "Test with file" button if the
AbstractFlatFileImporter.parserSection
parameter is present.
The web interface expects plugin parameters for the regular expressions as defined by the
AbstractFlatFileImporter
class. Parameters for
columns mappings must have the string "Mapping" in the parameter name. For
example reporterIdColumnMapping
, extendedColumnMapping.species
and propertyMapping.ch1FgMedian
.
All core plugins follow these directions.
- Version:
- 2.0
- Author:
- nicklas
- See Also:
- Last modified
- $Date: 2008-09-11 22:08:14 +0200 (to, 11 sep 2008) $
-
Nested Class Summary
Nested classes/interfaces inherited from interface net.sf.basedb.core.plugin.Plugin
Plugin.MainType
-
Method Summary
Methods inherited from interface net.sf.basedb.core.plugin.Plugin
done, getMainType, getPermissions, init, requiresConfiguration, run, supportsConfigurations