Package net.sf.basedb.util.export.spotdata
package net.sf.basedb.util.export.spotdata
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ClassDescriptionAn abstract superclass for all exporters that exports spot data from a bioassay set.Abstract helper class for implementing
ExportableFieldConverter
.Field converter implementation that gives more detailed control how fields are converted and used in the export.Assay field implementation that exports the annotations of a bioassay.Represents a bioassay field that is going to be exported.Assay field implementation that exports a named property from a bioassay.Exportable field converter that support BASE 1 naming conventions.A superclass for exporters that exports spot data to BASEfile format.Base class for exporting spotdata to BFS format.Represents a spot or reporter field that is going to be exported from a bioassay set.Interface that represents an exportable field.Defines method for converting a string representation to an exportable assay or dynamic field that can be used withAbstractBioAssaySetExporter
implementations.Utility class with factory methods that helps with the creation of exportable fields.Formatter implementation that formats an exportable field by returning the column title.A dynamic field implementation that uses a JEP expression to generate the expression that is needed to select the data.Exporter implementation that exports bioassay set data as a matrix BASEfile.BFS exporter implementation that exports spot data in matrix format.Exporter implementation that exports bioassay set data as a serial BASEfile.BFS exporter implementation that exports spot data in serial format.Represents an exported data field.Default field converter implementation that works mainly by checking names and/or external id values of formulas, extra values, experimental factors etc.