Package net.sf.basedb.util.export.spotdata

Interface Summary

AssayField	Represents a bioassay field that is going to be exported.
DynamicField	Represents a spot or reporter field that is going to be exported from a bioassay set.
ExportableField	Interface that represents an exportable field.
ExportableFieldConverter	Defines method for converting a string representation to an exportable assay or dynamic field that can be used with AbstractBioAssaySetExporter implementations.

Class Summary

AbstractBioAssaySetExporter	An abstract superclass for all exporters that exports spot data from a bioassay set.
AbstractFieldConverter	Abstract helper class for implementing ExportableFieldConverter.
AdvancedFieldConverter	Field converter implementation that gives more detailed control how fields are converted and used in the export.
AnnotationAssayField	Assay field implementation that exports the annotations of a bioassay.
AssayPropertyField	Assay field implementation that exports a named property from a bioassay.
Base1FieldConverter	Exportable field converter that support BASE 1 naming conventions.
BaseFileExporter	A superclass for exporters that exports spot data to BASEfile format.
BfsExporter	Base class for exporting spotdata to BFS format.
ExportableFieldFactory	Utility class with factory methods that helps with the creation of exportable fields.
ExportableFieldFormatter	Formatter implementation that formats an exportable field by returning the column title.
FieldConverter	Deprecated. In 2.15.
JepDynamicField	A dynamic field implementation that uses a JEP expression to generate the expression that is needed to select the data.
MatrixBaseFileExporter	Exporter implementation that exports bioassay set data as a matrix BASEfile.
MatrixBfsExporter	BFS exporter implementation that exports spot data in matrix format.
SerialBaseFileExporter	Exporter implementation that exports bioassay set data as a serial BASEfile.
SerialBfsExporter	BFS exporter implementation that exports spot data in serial format.
SimpleDynamicField	Represents an exported data field.
StandardFieldConverter	Default field converter implementation that works mainly by checking names and/or external id values of formulas, extra values, experimental factors etc.