net.sf.basedb.plugins
Class IlluminaRawDataImporter.BatchAndMapHolder

java.lang.Object
  net.sf.basedb.plugins.IlluminaRawDataImporter.BatchAndMapHolder

Enclosing class:

IlluminaRawDataImporter

private static class IlluminaRawDataImporter.BatchAndMapHolder
extends Object

Holds a RawBioAssay and the RawDataBatcher to use for import and the Mapper for all it's data columns.

Field Summary

private RawDataBatcher	batcher
private Map<RawDataProperty,Mapper>	mappers
private RawBioAssay	rba

Constructor Summary

private

IlluminaRawDataImporter.BatchAndMapHolder(RawDataBatcher batcher, RawDataType illumina, FlatFileParser ffp)

Method Summary

private void

createMappers(RawDataType illumina, FlatFileParser ffp)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

rba

private final RawBioAssay rba

batcher

private final RawDataBatcher batcher

mappers

private final Map<RawDataProperty,Mapper> mappers

Constructor Detail

IlluminaRawDataImporter.BatchAndMapHolder

private IlluminaRawDataImporter.BatchAndMapHolder(RawDataBatcher batcher,
                                                  RawDataType illumina,
                                                  FlatFileParser ffp)

Method Detail

createMappers

private void createMappers(RawDataType illumina,
                           FlatFileParser ffp)