Timeline



Sep 29, 2009:

12:25 PM Changeset [5110] by Jari Häkkinen
Added entry to the FAQ.
11:31 AM Ticket #1391 (The import button in experiment overview when all raw bioassays are ...) closed by Nicklas Nordborg
wontfix: This is a standardized message appearing at all places were no plug-in …
11:21 AM Changeset [5109] by Nicklas Nordborg
Fixes #1390: Annotation groups should be sorted according to title
11:21 AM Ticket #1390 (Annotation groups should be sorted according to title) closed by Nicklas Nordborg
fixed: (In [5109]) Fixes #1390: Annotation groups should be sorted according …
11:10 AM Ticket #1391 (The import button in experiment overview when all raw bioassays are ...) created by Jari Häkkinen
The message says […] The issue is really that BASE cannot find any …
11:06 AM Ticket #1390 (Annotation groups should be sorted according to title) created by Nicklas Nordborg
The annotation groups are sorted in a semi-random order. The order …
11:04 AM Changeset [5108] by Nicklas Nordborg
Fixes #1389: Cache annotation summary groups in experiment explorer
11:04 AM Ticket #1389 (Cache annotation summary groups in experiment explorer) closed by Nicklas Nordborg
fixed: (In [5108]) Fixes #1389: Cache annotation summary groups in experiment …
9:53 AM Ticket #1389 (Cache annotation summary groups in experiment explorer) created by Nicklas Nordborg
This may be related to #1387. Currently, new AnnotationSummary
9:49 AM Changeset [5107] by Nicklas Nordborg
Fixes #1388: Display the count for each group in the annotation …
9:49 AM Ticket #1388 (Display the count for each group in the annotation summary in ...) closed by Nicklas Nordborg
fixed: (In [5107]) Fixes #1388: Display the count for each group in the …
9:41 AM Ticket #1388 (Display the count for each group in the annotation summary in ...) created by Nicklas Nordborg
9:40 AM Tickets #1382,​1384 batch updated by Nicklas Nordborg
fixed: (In [5106]) Fixes #1382 and #1384: Move annotation summary selection …
9:40 AM Changeset [5106] by Nicklas Nordborg
Fixes #1382 and #1384: Move annotation summary selection and tables

Sep 28, 2009:

2:53 PM Changeset [5105] by Nicklas Nordborg
Fixes #1383: Make it possible to select more than one annotation in …
2:53 PM Ticket #1383 (Make it possible to select more than one annotation in experiment explorer) closed by Nicklas Nordborg
fixed: (In [5105]) Fixes #1383: Make it possible to select more than one …
11:39 AM Ticket #1372 (Item link in the 'Overview' tab should use the regular click-to-view ...) closed by Nicklas Nordborg
fixed: (In [5104]) Fixes #1372: Item link in the 'Overview' tab should use …
11:39 AM Changeset [5104] by Nicklas Nordborg
Fixes #1372: Item link in the 'Overview' tab should use the regular …
10:45 AM Ticket #1379 (Change default minimum intensity value and add support for 0=all ...) closed by Nicklas Nordborg
fixed: (In [5103]) Fixes #1379: Change default minimum intensity value and …
10:45 AM Changeset [5103] by Nicklas Nordborg
Fixes #1379: Change default minimum intensity value and add support …
9:02 AM Ticket #1368 (Reload permissions when the refresh button is clicked) closed by Nicklas Nordborg
wontfix: This is the use case that lead to the 'Reload permissions' function …
8:33 AM Ticket #1375 (Improve experiment explorer display) closed by Nicklas Nordborg
duplicate: This ticket has been split into several new tickets as outlined in the …
8:31 AM Ticket #1387 (More performance enhancements needed for experiment explorer) created by Nicklas Nordborg
Experiment explorer is still slow (cf ticket:903) and more performance …
8:30 AM Ticket #1386 (Plot function in the bioassay table in experiment explorer) created by Nicklas Nordborg
A plot button in bioassay list header. 1. The plot should display …
8:28 AM Ticket #1385 (Plot function in the annotation summary table in experiment explorer) created by Nicklas Nordborg
A plot button in annotation summary table. The plot should be a box …
8:26 AM Ticket #1384 (Move the annotation summary information table in experiment explorer) created by Nicklas Nordborg
The annotation summary table should be created to the right of the …
8:25 AM Ticket #1383 (Make it possible to select more than one annotation in experiment explorer) created by Nicklas Nordborg
The annotation summary dropdown should be a selection where the user …
8:24 AM Ticket #1382 (Move the annotation summary selection list in experiment explorer) created by Nicklas Nordborg
Annotation summary dropdown menu should be moved between reporter …
8:21 AM Ticket #1381 (Trunkate long strings in experiment explorer) created by Nicklas Nordborg
The displayed reporter annotation fields should be truncated as …
8:19 AM Ticket #1380 (Customize visible reporter fields in experiment explorer) created by Nicklas Nordborg
The reporter annotation information display (Reporter View tab) should …
8:09 AM Ticket #1373 (Permission denied exception when viewing item that has inherited an ...) closed by Nicklas Nordborg
fixed: (In [5102]) Fixes #1373: Permission denied exception when viewing item …
8:09 AM Changeset [5102] by Nicklas Nordborg
Fixes #1373: Permission denied exception when viewing item that has …

Sep 23, 2009:

1:21 PM Ticket #1379 (Change default minimum intensity value and add support for 0=all ...) created by Jari Häkkinen
In BASE2 plugin 'Normalization: Median ratio', parameter Blockgroup …
11:34 AM DownloadPage edited by Jari Häkkinen
Updated link for BASE 1.2 download (diff)

Sep 22, 2009:

10:16 AM Ticket #1378 (Base1PluginExecuter should link the result directory with the ...) created by Jari Häkkinen
Related to ticket:1279 When a BASE1 plug-in stores result files the …

Sep 18, 2009:

11:29 AM Ticket #1377 (Filter item lists on the 'Shared to' column) created by Jari Häkkinen
... we simply need such a feature.
9:55 AM Ticket #1376 (Remove the working directory (in the BASE file system) that ...) created by Jari Häkkinen
The directories should only be created if needed. All BASE1 plug-ins …

Sep 17, 2009:

3:07 PM Ticket #1375 (Improve experiment explorer display) created by Jari Häkkinen
This ticket can be split to several tickets but we choose to write …
11:31 AM Ticket #1374 (Caching of experimental factors) created by Jari Häkkinen
The experiment properties view takes a long time to appear when there …
11:09 AM Ticket #1373 (Permission denied exception when viewing item that has inherited an ...) created by Jari Häkkinen
The scenario: UserA has a rawbioassay RBA derived from SampleA (path: …
10:48 AM Ticket #1372 (Item link in the 'Overview' tab should use the regular click-to-view ...) created by Jari Häkkinen
I have a suggestion to a small behaviour change in the GUI. …

Sep 15, 2009:

8:22 AM Changeset [5101] by Nicklas Nordborg
References #1366: Manual transform creator should have option to …
8:12 AM Ticket #1371 (Update the database overview) closed by Nicklas Nordborg
fixed: (In [5100]) Fixes #1371: Update the database overview
8:12 AM Changeset [5100] by Nicklas Nordborg
Fixes #1371: Update the database overview
7:50 AM Ticket #1371 (Update the database overview) created by Nicklas Nordborg
http://base.thep.lu.se/chrome/site/latest/html/developerdoc/api/api_ove

Sep 14, 2009:

12:14 PM Changeset [5099] by Nicklas Nordborg
Fixes #1370: The <base:icon> taglib should support absolute image url:s
12:14 PM Ticket #1370 (The <base:icon> taglib should support absolute image url:s) closed by Nicklas Nordborg
fixed: (In [5099]) Fixes #1370: The <base:icon> taglib should support …
11:24 AM Ticket #1370 (The <base:icon> taglib should support absolute image url:s) created by Nicklas Nordborg
This taglib currently assumes that all images are in the …
8:46 AM Changeset [5098] by Nicklas Nordborg
Fixes #1369: A new array design does not get a registered date No …
8:46 AM Ticket #1369 (A new array design does not get a registered date) closed by Nicklas Nordborg
fixed: (In [5098]) Fixes #1369: A new array design does not get a registered …
8:44 AM Changeset [5097] by Nicklas Nordborg
Fixes #1367: Changing permissions on an item should trigger a reload …
8:44 AM Ticket #1367 (Changing permissions on an item should trigger a reload of the cached ...) closed by Nicklas Nordborg
fixed: (In [5097]) Fixes #1367: Changing permissions on an item should …
8:29 AM Changeset [5096] by Nicklas Nordborg
Fixes #1366: Manual transform creator should have option to import …
8:29 AM Ticket #1366 (Manual transform creator should have option to import data from BASEfile:s) closed by Nicklas Nordborg
fixed: (In [5096]) Fixes #1366: Manual transform creator should have option …

Sep 11, 2009:

8:51 AM Changeset [5095] by Nicklas Nordborg
References #1365: Move BASEFile import code to a separate class …

Sep 10, 2009:

2:38 PM Changeset [5094] by Nicklas Nordborg
References #741 and #1365 Missed this file in [5093]
2:36 PM Changeset [5093] by Nicklas Nordborg
Fixes #1365: Move BASEFile import code to a separate class References …
2:36 PM Ticket #1365 (Move BASEFile import code to a separate class) closed by Nicklas Nordborg
fixed: (In [5093]) Fixes #1365: Move BASEFile import code to a separate class …

Sep 9, 2009:

10:10 AM Ticket #1369 (A new array design does not get a registered date) created by Jari Häkkinen
I am adding a new array design but there is no registered date …
9:57 AM Ticket #1368 (Reload permissions when the refresh button is clicked) created by Jari Häkkinen
In many cases the permissions are confusing for the users and users do …
9:54 AM Ticket #1367 (Changing permissions on an item should trigger a reload of the cached ...) created by Jari Häkkinen
The problem is straightforward; Create an item and share it to a …

Sep 8, 2009:

9:25 AM Changeset [5092] by Jari Häkkinen
Added 2009 to copyright

Sep 1, 2009:

11:26 AM Ticket #1366 (Manual transform creator should have option to import data from BASEfile:s) created by Nicklas Nordborg
If a manual transform generates either a serial or matrix BASEfile …
11:24 AM Ticket #1365 (Move BASEFile import code to a separate class) created by Nicklas Nordborg
This code is currently in the Base1PluginExecuter as a private …

Aug 31, 2009:

11:21 AM Milestone BASE 2.13 completed
11:21 AM Changeset [5091] by Nicklas Nordborg
Merged pre-2.13-releases to the trunk.
11:10 AM DownloadPage edited by Nicklas Nordborg
Releasing BASE 2.13 (diff)
11:05 AM Changeset [5090] by Nicklas Nordborg
Changes for future release 2.13.1
9:44 AM Changeset [5089] by Nicklas Nordborg
Tagging version 2.13
9:43 AM Changeset [5088] by Nicklas Nordborg
Preparing release 2.13
9:41 AM Ticket #1350 (Update to Hibernate 3.3.2) closed by Nicklas Nordborg
fixed: Closing this, but we should upgrade Hibernate as soon as HHH-4065 is …
9:40 AM Ticket #1364 (Update Hibernate when HHH-4065 has been fixed) created by Nicklas Nordborg
The update to Hibernate 3.3.2 in #1350 had a nasty bug as a …
9:36 AM Ticket #108 (Logging the change history of an item) closed by Nicklas Nordborg
fixed
9:35 AM Ticket #1363 (IE8 problems (javascript, etc)) closed by Nicklas Nordborg
fixed: The rest of the test procedure has been completed without problems. …
9:33 AM Changeset [5087] by Nicklas Nordborg
References #1302: Overview plots and correction factor plots as …
8:20 AM Changeset [5086] by Nicklas Nordborg
References #1281: Change display-format of Biowell coordinates …
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