Timeline
May 29, 2009:
- 4:34 PM Ticket #1319 (JEP intensity transformer dialogue complains if 'Resulting transform' ...) created by
- I try to run the plug-in without any changes to the defaults but it …
- 2:41 PM Ticket #1318 (Extension servlets can't use 'forward' to continue processing a ...) closed by
- fixed: (In [4957]) Fixes #1318: Extension servlets can't use 'forward' to …
- 2:41 PM Changeset [4957] by
- Fixes #1318: Extension servlets can't use 'forward' to continue …
- 2:37 PM Ticket #1318 (Extension servlets can't use 'forward' to continue processing a ...) updated by
-
Status, Owner changed
- 2:37 PM Ticket #1318 (Extension servlets can't use 'forward' to continue processing a ...) created by
- The regular procedure for a servlet to forward the processing to …
May 27, 2009:
- 2:59 PM Milestone BASE 2.12 completed
- 2:58 PM Milestone BASE 2.11.1 completed
- Bug fixes for 2.11. Revision Log: log:branches/2.11-stable@4862:4949
- 2:57 PM DownloadPage edited by
- Releasing BASE 2.12 (diff)
- 2:51 PM Changeset [4956] by
- Changes for future release 2.12.1
- 2:41 PM Changeset [4955] by
- Tagging version 2.12
- 2:40 PM Changeset [4954] by
- Preparing release 2.12
- 12:10 PM Changeset [4953] by
- Changes for future release 2.13
- 12:09 PM Changeset [4952] by
- Forking new minor version 2.12 branch
- 12:07 PM Changeset [4951] by
- Merged patch release 2.11.1 to the trunk.
- 11:58 AM DownloadPage edited by
- Releasing BASE 2.11.1 (diff)
- 11:53 AM Changeset [4950] by
- Changes for future release 2.11.2
- 11:37 AM Changeset [4949] by
- Tagging version 2.11.1
- 11:36 AM Changeset [4948] by
- Preparing release 2.11.1
- 8:17 AM Changeset [4947] by
- Want to check if specifying charset=utf-8 makes the names display correctly
May 26, 2009:
- 8:20 PM WikiStart edited by
- Added link to credits.txt (diff)
- 8:14 PM Changeset [4946] by
- Changed credits.txt layout and prepared it for wiki presentation.
- 1:28 PM Changeset [4945] by
- Fixes #1313
- 1:28 PM Ticket #1313 (Autoinstaller wizzard should detect and display changed plug-ins) closed by
- fixed: (In [4945]) Fixes #1313
- 11:02 AM Ticket #1301 (BASE and GenePattern) closed by
- duplicate: Moved to BASE plug-ins site: …
- 9:37 AM Ticket #1313 (Autoinstaller wizzard should detect and display changed plug-ins) reopened by
- Install all option is not visible if the jar-file of a plug-in …
May 25, 2009:
- 10:59 AM Ticket #1317 (Table export of items with åäö in name generates strange characters in file) closed by
- invalid
- 10:55 AM Changeset [4944] by
- Fixes #1185: Manual transform creator
- 10:55 AM Ticket #1185 (Manual transform creator) closed by
- fixed: (In [4944]) Fixes #1185: Manual transform creator
May 20, 2009:
- 6:56 PM Ticket #1317 (Table export of items with åäö in name generates strange characters in file) updated by
- The table exporter generates UTF-8 encoded files so this is not a …
- 3:54 PM Ticket #1317 (Table export of items with åäö in name generates strange characters in file) created by
- I have added a screenshot and the exported file. These should explain …
- 1:30 PM Changeset [4943] by
- References #1185: Manual transform creator It is possible to …
- 1:30 PM Ticket #1185 (Manual transform creator) updated by
- (In [4943]) References #1185: Manual transform creator It is possible …
- 12:50 PM Changeset [4942] by
- Fixes #1316: Bioassay set view page should display 'Items related to …
- 12:50 PM Ticket #1316 (Bioassay set view page should display 'Items related to this bioassay set') closed by
- fixed: (In [4942]) Fixes #1316: Bioassay set view page should display 'Items …
- 11:57 AM Ticket #1316 (Bioassay set view page should display 'Items related to this bioassay set') updated by
-
Status, Owner changed
- 11:57 AM Ticket #1316 (Bioassay set view page should display 'Items related to this bioassay set') created by
- It is similar to the 'Items related to this transformation' that is …
- 11:54 AM Changeset [4941] by
- Fixes #1315: A plug-in which uses 'execute immediately' can't get the …
- 11:54 AM Ticket #1315 (A plug-in which uses 'execute immediately' can't get the current job ...) closed by
- fixed: (In [4941]) Fixes #1315: A plug-in which uses 'execute immediately' …
- 11:48 AM Ticket #1315 (A plug-in which uses 'execute immediately' can't get the current job ...) updated by
-
Status, Owner changed
- 11:47 AM Ticket #1315 (A plug-in which uses 'execute immediately' can't get the current job ...) created by
- By looking at the code it seems like the job-id is set when the …
- 8:42 AM Changeset [4940] by
- References #1290: Change source files to UTF-8 Fixed non UTF-8 character.
- 8:42 AM Ticket #1290 (Change source files to UTF-8) updated by
- (In [4940]) References #1290: Change source files to UTF-8 Fixed non …
- 7:45 AM Changeset [4939] by
- References #1310: Annotations for protocols Show/validate protocol …
- 7:45 AM Ticket #1310 (Annotations for protocols) updated by
- (In [4939]) References #1310: Annotations for protocols Show/validate …
May 19, 2009:
- 3:00 PM Ticket #1301 (BASE and GenePattern) updated by
- We had a quick look at this today... and it doesn't seem to be all …
- 1:28 PM Ticket #108 (Logging the change history of an item) updated by
- There is a discussion about some problems related to this in ticket …
- 12:43 PM Ticket #1185 (Manual transform creator) updated by
- > Hmmm.... maybe we can use annotation types for this? It is already …
- 12:27 PM Ticket #1185 (Manual transform creator) updated by
-
Status, Owner changed
- 11:24 AM Changeset [4938] by
- Fixes #1310: Annotations for protocols The code worked perfectly …
- 11:24 AM Ticket #1310 (Annotations for protocols) closed by
- fixed: (In [4938]) Fixes #1310: Annotations for protocols The code worked …
- 10:58 AM Ticket #742 (Refactor BioAssaySetExporter) closed by
- fixed: This seems to work fine now. Both MeV exporters are in place and working.
- 10:51 AM Ticket #1310 (Annotations for protocols) updated by
-
Milestone changed
- 9:49 AM Changeset [4937] by
- References #1271: Add extension points to all toolbars Buttons use …
- 9:49 AM Ticket #1271 (Add extension points to all toolbars) updated by
- (In [4937]) References #1271: Add extension points to all toolbars …
May 18, 2009:
- 4:57 PM Ticket #1310 (Annotations for protocols) updated by
- I have uploaded a patch. It contains two small changes in java code …
- 1:16 PM Changeset [4936] by
- Fixes #1313 Autoinstaller wizzard should detect and display changed …
- 1:16 PM Ticket #1313 (Autoinstaller wizzard should detect and display changed plug-ins) closed by
- fixed: (In [4936]) Fixes #1313 Autoinstaller wizzard should detect and …
- 9:03 AM Changeset [4935] by
- References #1120: The dynamic part of BASE should keep track whether …
- 9:03 AM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4935]) References #1120: The dynamic part of BASE should keep …
May 15, 2009:
- 3:46 PM Changeset [4934] by
- References #1313 The wizzard no compares the version number between …
- 3:46 PM Ticket #1313 (Autoinstaller wizzard should detect and display changed plug-ins) updated by
- (In [4934]) References #1313 The wizzard no compares the version …
- 1:44 PM Changeset [4933] by
- Fixes #1314: Keep the menubar fixed at top of the screen
- 1:44 PM Ticket #1314 (Keep the menubar fixed at top of the screen) closed by
- fixed: (In [4933]) Fixes #1314: Keep the menubar fixed at top of the screen
- 1:37 PM Ticket #1314 (Keep the menubar fixed at top of the screen) updated by
-
Owner, Status changed
- 1:37 PM Ticket #1314 (Keep the menubar fixed at top of the screen) created by
- An annoying thing on long pages is that as soon as you scroll …
- 1:08 PM Ticket #1185 (Manual transform creator) updated by
-
Description changed
I am thinking about implementing this as a plug-in as well. The … - 11:52 AM Ticket #742 (Refactor BioAssaySetExporter) updated by
- (In [4932]) References #742: Refactor BioAssaySetExporter Removed …
- 11:52 AM Changeset [4932] by
- References #742: Refactor BioAssaySetExporter Removed references in …
May 14, 2009:
- 2:11 PM Ticket #1313 (Autoinstaller wizzard should detect and display changed plug-ins) updated by
-
Owner, Status changed
- 1:49 PM Ticket #1313 (Autoinstaller wizzard should detect and display changed plug-ins) created by
- The plug-in change detection in the autoinstaller should be improved. …
- 1:16 PM Changeset [4931] by
- References #742: Refactor BioAssaySetExporter This fixes the web …
- 1:16 PM Ticket #742 (Refactor BioAssaySetExporter) updated by
- (In [4931]) References #742: Refactor BioAssaySetExporter This fixes …
- 11:41 AM Changeset [4930] by
- References #742: Refactor BioAssaySetExporter Base1PluginExecuter now …
- 11:41 AM Ticket #742 (Refactor BioAssaySetExporter) updated by
- (In [4930]) References #742: Refactor BioAssaySetExporter …
- 10:02 AM Ticket #1312 (Invalid password - pop up does not support none-ASCII characters in login) closed by
- invalid: Local firefox-problem. Tested successfully with other browsers.
May 13, 2009:
- 2:59 PM Ticket #1312 (Invalid password - pop up does not support none-ASCII characters in login) updated by
-
Owner, Status changed
- 2:54 PM Ticket #1311 (Login fails if password contains non-ASCII characters.) closed by
- fixed: (In [4929]) Fixes #1311 Login fails if password contains non-ASCII …
- 2:54 PM Changeset [4929] by
- Fixes #1311 Login fails if password contains non-ASCII characters.
- 1:01 PM Changeset [4928] by
- References #742: Refactor BioAssaySetExporter The new BASEfile …
- 1:01 PM Ticket #742 (Refactor BioAssaySetExporter) updated by
- (In [4928]) References #742: Refactor BioAssaySetExporter The new …
- 11:22 AM Ticket #1307 (File view fails if a file name contains non-ascii characters) closed by
- fixed: (In [4927]) Fixes #1307 File view fails if a file name contains …
- 11:22 AM Changeset [4927] by
- Fixes #1307 File view fails if a file name contains non-ascii characters
- 11:21 AM Ticket #1312 (Invalid password - pop up does not support none-ASCII characters in login) created by
- Make sure an user with login containing none-ASCII characters exists …
- 10:04 AM Ticket #1311 (Login fails if password contains non-ASCII characters.) updated by
-
Description changed
- 10:03 AM Ticket #1311 (Login fails if password contains non-ASCII characters.) created by
- Only if Encrypt password is checked.
May 12, 2009:
- 11:10 AM Ticket #742 (Refactor BioAssaySetExporter) updated by
- Replying to nicklas: > There is now a new use case in …
- 10:57 AM Ticket #1310 (Annotations for protocols) created by
- Could also protocols be annotatable? That will help to store some more …
- 10:54 AM Ticket #1309 (externalId for protocols) created by
- It could be used for example to identify protocols in any other data …
May 11, 2009:
- 3:35 PM Ticket #1308 (Batch scan imports with images) updated by
-
Milestone changed
- 2:58 PM Ticket #1308 (Batch scan imports with images) closed by
- duplicate: Duplicate of #1303.
- 2:34 PM Ticket #1308 (Batch scan imports with images) created by
- It would be great if batch scan importing plugin could also create …
- 1:50 PM Ticket #1307 (File view fails if a file name contains non-ascii characters) updated by
-
Owner, Status changed
- 1:01 PM Changeset [4926] by
- References #742: Refactor BioAssaySetExporter Added some more support …
- 1:01 PM Ticket #742 (Refactor BioAssaySetExporter) updated by
- (In [4926]) References #742: Refactor BioAssaySetExporter Added some …
- 12:31 PM Ticket #1307 (File view fails if a file name contains non-ascii characters) updated by
-
Summary changed
May 8, 2009:
- 1:30 PM Changeset [4925] by
- References #742: Refactor BioAssaySetExporter The new exporter …
- 1:30 PM Ticket #742 (Refactor BioAssaySetExporter) updated by
- (In [4925]) References #742: Refactor BioAssaySetExporter The new …
- 9:59 AM Ticket #1307 (File view fails if a file name contains non-ascii characters) created by
- * Upload a file that contains non-ascii characters. For example an …
May 7, 2009:
- 1:56 PM Changeset [4924] by
- Fixes #1306 File browser fails if wrong project is selected when …
- 1:56 PM Ticket #1306 (File browser fails if wrong project is selected when browsing a ...) closed by
- fixed: (In [4924]) Fixes #1306 File browser fails if wrong project is …
- 1:20 PM Ticket #1306 (File browser fails if wrong project is selected when browsing a ...) updated by
-
Status, Owner changed
- 12:43 PM Ticket #1305 (table exporter says java.io.IOException: Unknown column 'spt.ch2' in ...) closed by
- fixed: (In [4923]) Fixes #1305 table exporter says java.io.IOException: …
- 12:43 PM Changeset [4923] by
- Fixes #1305 table exporter says java.io.IOException: Unknown column …
May 6, 2009:
- 2:13 PM Ticket #1306 (File browser fails if wrong project is selected when browsing a ...) updated by
- This description makes a lot more sense than the original one. The …
- 1:39 PM Ticket #1306 (File browser fails if wrong project is selected when browsing a ...) updated by
- User1 creates two directories and shares (with R) these to one project …
- 1:27 PM Ticket #1305 (table exporter says java.io.IOException: Unknown column 'spt.ch2' in ...) updated by
-
Owner, Status changed
- 12:45 PM Ticket #1303 (Batch scan importer improvements) closed by
- fixed: (In [4922]) Fixes #1303 Batch scan importer improvements
- 12:45 PM Changeset [4922] by
- Fixes #1303 Batch scan importer improvements
May 5, 2009:
- 8:59 PM Ticket #1305 (table exporter says java.io.IOException: Unknown column 'spt.ch2' in ...) updated by
- Here is the correct formatting of the above comment. I just …
- 8:51 PM Ticket #1305 (table exporter says java.io.IOException: Unknown column 'spt.ch2' in ...) updated by
- I just checked the code and I think the problem lies in the lack of a …
- 8:44 PM Ticket #1306 (File browser fails if wrong project is selected when browsing a ...) updated by
- What is the 'defect' in this situation? It is the same error message …
- 8:35 PM Ticket #1305 (table exporter says java.io.IOException: Unknown column 'spt.ch2' in ...) updated by
- Hmmm.... I just noticed a something strange with a two-channel …
- 8:19 PM Ticket #1306 (File browser fails if wrong project is selected when browsing a ...) created by
- See the attached screen dump for the error message. The problem rises …
- 8:19 PM Ticket #1305 (table exporter says java.io.IOException: Unknown column 'spt.ch2' in ...) updated by
- I assume that the spot listing in the web interface works as expected, …
- 3:34 PM Ticket #1305 (table exporter says java.io.IOException: Unknown column 'spt.ch2' in ...) created by
- I get the following file output when I run the table exporter in a …
May 4, 2009:
- 4:38 PM Changeset [4921] by
- References #1303 The batch scan importer should now be able to import …
- 4:38 PM Ticket #1303 (Batch scan importer improvements) updated by
- (In [4921]) References #1303 The batch scan importer should now be …
- 12:04 PM Ticket #1294 (Limit the vertical size of "Projects", "New messages" and "News and ...) closed by
- fixed: The "scroll bar" solution seems to work ok.
- 12:00 PM Ticket #742 (Refactor BioAssaySetExporter) updated by
-
Status, Owner, Milestone changed
There is now a new use case in … - 11:33 AM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) closed by
- fixed: (In [4920]) Fixes #1120: The dynamic part of BASE should keep track …
- 11:33 AM Changeset [4920] by
- Fixes #1120: The dynamic part of BASE should keep track whether …
- 11:15 AM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4919]) References #1120: The dynamic part of BASE should keep …
- 11:15 AM Changeset [4919] by
- References #1120: The dynamic part of BASE should keep track whether …
- 9:52 AM Changeset [4918] by
- References #1120: The dynamic part of BASE should keep track whether …
- 9:52 AM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4918]) References #1120: The dynamic part of BASE should keep …
Apr 30, 2009:
- 2:30 PM Changeset [4917] by
- References #1120: The dynamic part of BASE should keep track whether …
- 2:30 PM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4917]) References #1120: The dynamic part of BASE should keep …
- 11:32 AM Changeset [4916] by
- References #1120: The dynamic part of BASE should keep track whether …
- 11:32 AM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4916]) References #1120: The dynamic part of BASE should keep …
- 9:20 AM Changeset [4915] by
- References #1120: The dynamic part of BASE should keep track whether …
- 9:20 AM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4915]) References #1120: The dynamic part of BASE should keep …
Apr 29, 2009:
- 3:36 PM Changeset [4914] by
- References #1120: The dynamic part of BASE should keep track whether …
- 3:36 PM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4914]) References #1120: The dynamic part of BASE should keep …
- 2:54 PM Changeset [4913] by
- References #1120: The dynamic part of BASE should keep track whether …
- 2:54 PM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4913]) References #1120: The dynamic part of BASE should keep …
- 1:49 PM Changeset [4912] by
- References #1120: The dynamic part of BASE should keep track whether …
- 1:49 PM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4912]) References #1120: The dynamic part of BASE should keep …
- 1:16 PM Ticket #1302 (Overview plots and correction factor plots as extension) updated by
- (In [4911]) Fixes #1302: Overview plots and correction factor plots as …
- 1:16 PM Changeset [4911] by
- Fixes #1302: Overview plots and correction factor plots as extension …
- 11:05 AM Ticket #1120 (The dynamic part of BASE should keep track whether intensity data is ...) updated by
- (In [4910]) References #1120: The dynamic part of BASE should keep …
- 11:05 AM Changeset [4910] by
- References #1120: The dynamic part of BASE should keep track whether …
- 9:14 AM Changeset [4909] by
- Added 'svn.diff' target to build.xml that generates a patch with the …
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