Timeline



Apr 30, 2009:

2:30 PM Changeset [4917] by Nicklas Nordborg
References #1120: The dynamic part of BASE should keep track whether …
11:32 AM Changeset [4916] by Nicklas Nordborg
References #1120: The dynamic part of BASE should keep track whether …
9:20 AM Changeset [4915] by Nicklas Nordborg
References #1120: The dynamic part of BASE should keep track whether …

Apr 29, 2009:

3:36 PM Changeset [4914] by Nicklas Nordborg
References #1120: The dynamic part of BASE should keep track whether …
2:54 PM Changeset [4913] by Nicklas Nordborg
References #1120: The dynamic part of BASE should keep track whether …
1:49 PM Changeset [4912] by Nicklas Nordborg
References #1120: The dynamic part of BASE should keep track whether …
1:16 PM Changeset [4911] by Nicklas Nordborg
Fixes #1302: Overview plots and correction factor plots as extension …
11:05 AM Changeset [4910] by Nicklas Nordborg
References #1120: The dynamic part of BASE should keep track whether …
9:14 AM Changeset [4909] by Nicklas Nordborg
Added 'svn.diff' target to build.xml that generates a patch with the …

Apr 28, 2009:

2:47 PM Changeset [4908] by Nicklas Nordborg
Fixes #1302: Overview plots and correction factor plots as extension
2:47 PM Ticket #1302 (Overview plots and correction factor plots as extension) closed by Nicklas Nordborg
fixed: (In [4908]) Fixes #1302: Overview plots and correction factor plots as …
8:50 AM Ticket #1297 (Add support for custom 'data loaders' and collections to ...) closed by Martin Svensson
fixed
8:47 AM Ticket #1128 (Export of child items) closed by Martin Svensson
fixed: (In [4907]) Fixes #1128 Export of child items
8:47 AM Changeset [4907] by Martin Svensson
Fixes #1128 Export of child items
8:14 AM Ticket #1304 (Add support for exporting CGH data to MeV) closed by Nicklas Nordborg
duplicate: The MeV export is in the core because once MeV was also part of the …

Apr 27, 2009:

2:24 PM Ticket #1304 (Add support for exporting CGH data to MeV) created by Jari Häkkinen
This is supposed to be straightforward the format is well-defined.
2:21 PM Ticket #1303 (Batch scan importer improvements) created by Jari Häkkinen
Copied from the mailing list (thread started at March 11, 2009) We …
11:52 AM Ticket #1302 (Overview plots and correction factor plots as extension) created by Jari Häkkinen
... and create extension points where the plots should be added.
11:45 AM Ticket #1301 (BASE and GenePattern) created by Jari Häkkinen
GenePattern, http://www.broad.mit.edu/cancer/software/genepattern/, …

Apr 24, 2009:

3:53 PM Changeset [4906] by Martin Svensson
References #1128 More item-pages updated
1:43 PM Ticket #1300 (Group list-page does not list users that are members) closed by Martin Svensson
wontfix: Group list-page does not list users that are members - this is not …
1:30 PM Changeset [4905] by Nicklas Nordborg
Fixes #1299: Remove the section om MeV in the docs
1:30 PM Ticket #1299 (Remove the section om MeV in the docs) closed by Nicklas Nordborg
fixed: (In [4905]) Fixes #1299: Remove the section om MeV in the docs
1:24 PM Changeset [4904] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Disabled …
1:16 PM Changeset [4903] by Nicklas Nordborg
Fixes #1179: A user should be able to see which groups he is a part of …
1:16 PM Ticket #1179 (A user should be able to see which groups he is a part of without any ...) closed by Nicklas Nordborg
fixed: (In [4903]) Fixes #1179: A user should be able to see which groups he …
12:56 PM Ticket #550 (Write "Overview of BASE" section in Developer documentation part) closed by Nicklas Nordborg
fixed: (In [4902]) Fixes #550: Write "Overview of BASE" section in Developer …
12:56 PM Changeset [4902] by Nicklas Nordborg
Fixes #550: Write "Overview of BASE" section in Developer …
12:56 PM Ticket #1300 (Group list-page does not list users that are members) created by Martin Svensson
The users-column at group list-page does not list any users, although …
9:13 AM Ticket #1055 (Messaging system) closed by Jari Häkkinen
wontfix: User messaging will not be introduced. Use mail or SMS.

Apr 23, 2009:

3:57 PM Changeset [4901] by Martin Svensson
References #1128 Updated list-pages and index-pages for the majority …
10:23 AM Ticket #1299 (Remove the section om MeV in the docs) created by Jari Häkkinen

Apr 21, 2009:

7:58 PM Ticket #1298 (error when hybridising multiple arrays on one slide (Agilent 4x44k)) closed by Nicklas Nordborg
invalid: A slide can only be associated with a single hybridization. The proper …
6:34 PM Ticket #1298 (error when hybridising multiple arrays on one slide (Agilent 4x44k)) created by base
I am using the agilent 4x44k arrays (4 arrays per slide), and cant …
2:54 PM Changeset [4900] by Martin Svensson
References #1128 Parents of extracts can now be exported with the …
11:32 AM Changeset [4899] by Martin Svensson
References #1128 Tested the dataloaders on extracts' children.
11:29 AM Changeset [4898] by Martin Svensson
References #1297 Added support for custom data loaders and collections
8:20 AM Changeset [4897] by Nicklas Nordborg
References #1294: Limit the vertical size of "Projects", "New …

Apr 20, 2009:

1:16 PM Ticket #1297 (Add support for custom 'data loaders' and collections to ...) created by Nicklas Nordborg
The use of a Formatter implementation as described in #1272 turned out …
1:08 PM Changeset [4896] by Martin Svensson
References #1128 Undoing changeset [4895]
8:38 AM Changeset [4895] by Martin Svensson
Refereces #1128 Added new formatter classes and tested them on complex …

Apr 8, 2009:

10:29 AM Changeset [4894] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Toolbar …
10:17 AM Changeset [4893] by Nicklas Nordborg
Fixes #1295: Downloading files with space characters in the filename …
10:17 AM Ticket #1295 (Downloading files with space characters in the filename will suggest ...) closed by Nicklas Nordborg
fixed: (In [4893]) Fixes #1295: Downloading files with space characters in …
10:05 AM Ticket #1296 (Disallow quote characters in file names) closed by Nicklas Nordborg
fixed: (In [4892]) Fixes #1296: Disallow quote characters in file names
10:05 AM Changeset [4892] by Nicklas Nordborg
Fixes #1296: Disallow quote characters in file names
9:22 AM Ticket #1296 (Disallow quote characters in file names) created by Nicklas Nordborg
It should probably have been in the list of "forbidden" characters to …
8:39 AM Ticket #1295 (Downloading files with space characters in the filename will suggest ...) created by Jari Häkkinen
I am not sure if this is a BASE problem but it is annoying because, in …
7:43 AM Ticket #1294 (Limit the vertical size of "Projects", "New messages" and "News and ...) created by Jari Häkkinen
As a university core facility our staff have many projects and in …

Apr 7, 2009:

9:50 AM Ticket #1290 (Change source files to UTF-8) closed by Nicklas Nordborg
fixed
9:48 AM Changeset [4891] by Nicklas Nordborg
Fixes #1291: Batch importing same labeled extract in more than one …
9:48 AM Ticket #1291 (Batch importing same labeled extract in more than one array on a ...) closed by Nicklas Nordborg
fixed: (In [4891]) Fixes #1291: Batch importing same labeled extract in more …
9:03 AM Changeset [4890] by Nicklas Nordborg
Fixes #1292: Use colours when reporting job status in a pop-up
9:03 AM Ticket #1292 (Use colours when reporting job status in a pop-up) closed by Nicklas Nordborg
fixed: (In [4890]) Fixes #1292: Use colours when reporting job status in a pop-up

Apr 6, 2009:

4:51 PM Ticket #1293 (Changing name of the 'File' entry in the top toolbar to 'BASE') created by Jari Häkkinen
The content of the 'File' menu entry does not look like a standard …
4:47 PM Ticket #1292 (Use colours when reporting job status in a pop-up) created by Jari Häkkinen
Sometimes the error message in the job pop-up can be hard to spot. Can …
4:45 PM Ticket #1291 (Batch importing same labeled extract in more than one array on a ...) created by Jari Häkkinen
I noticed that trying to batch import a multi-array hybridization with …
2:52 PM Changeset [4889] by Nicklas Nordborg
References #1290: Change source files to UTF-8 Changed 'Hakkinen' to …
2:15 PM Changeset [4888] by Nicklas Nordborg
References #1290: Change source files to UTF-8 All *.java, *.jsp and …
12:38 PM Ticket #1290 (Change source files to UTF-8) created by Nicklas Nordborg
I think it is time to convert all our source code files to use UTF-8 …
9:58 AM Changeset [4887] by Nicklas Nordborg
Fixes #1271: Add extension points to all toolbars All toolbars should …
9:58 AM Ticket #1271 (Add extension points to all toolbars) closed by Nicklas Nordborg
fixed: (In [4887]) Fixes #1271: Add extension points to all toolbars All …

Apr 3, 2009:

3:02 PM Changeset [4886] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Added code for …
1:50 PM Changeset [4885] by Nicklas Nordborg
References #1289: Biomaterial classes should implement the Registered …
1:49 PM Changeset [4884] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Added code for …
1:01 PM Changeset [4883] by Martin Svensson
References #1281 Updates a missed title
12:53 PM Changeset [4882] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Added code for …
12:40 PM Changeset [4881] by Nicklas Nordborg
References #1289: Biomaterial classes should implement the Registered …
11:39 AM Changeset [4880] by Nicklas Nordborg
Fixes #1289: Biomaterial classes should implement the Registered interface
11:39 AM Ticket #1289 (Biomaterial classes should implement the Registered interface) closed by Nicklas Nordborg
fixed: (In [4880]) Fixes #1289: Biomaterial classes should implement the …
11:26 AM Changeset [4879] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Added code for …
11:24 AM Ticket #1289 (Biomaterial classes should implement the Registered interface) created by Nicklas Nordborg
The Registered interface was introduced by #1166. But it was only …
9:05 AM Changeset [4878] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Added …
8:32 AM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) closed by Martin Svensson
fixed: See related tickets: #1281, #1282
8:13 AM Changeset [4877] by Nicklas Nordborg
References #1288: Tables doesn't indicate if there is a filter on a …
8:10 AM Changeset [4876] by Nicklas Nordborg
Fixes #1288: Tables doesn't indicate if there is a filter on a …
8:10 AM Ticket #1288 (Tables doesn't indicate if there is a filter on a property that ...) closed by Nicklas Nordborg
fixed: (In [4876]) Fixes #1288: Tables doesn't indicate if there is a filter …
8:08 AM Ticket #1288 (Tables doesn't indicate if there is a filter on a property that ...) created by Nicklas Nordborg
If you filter a table manually there is a small "filter" icon …

Apr 2, 2009:

1:59 PM Changeset [4875] by Nicklas Nordborg
Fixes #1287: Make it possible to update an extension to another …
1:59 PM Ticket #1287 (Make it possible to update an extension to another extension point) closed by Nicklas Nordborg
fixed: (In [4875]) Fixes #1287: Make it possible to update an extension to …
1:56 PM Ticket #1287 (Make it possible to update an extension to another extension point) created by Nicklas Nordborg
There is currently a problem if an update is made to a registered …
12:40 PM Ticket #1286 (Add support of id-base attribute to extension xml files) closed by Nicklas Nordborg
fixed: (In [4874]) Fixes #1286: Add support of id-base attribute to extension …
12:40 PM Changeset [4874] by Nicklas Nordborg
Fixes #1286: Add support of id-base attribute to extension xml files
10:58 AM Changeset [4873] by Martin Svensson
Fixes #1274 Disable/hide "Validate" and "Extract metadata" options on …
10:58 AM Ticket #1274 (Disable/hide "Validate" and "Extract metadata" options on the "Data ...) closed by Martin Svensson
fixed: (In [4873]) Fixes #1274 Disable/hide "Validate" and "Extract metadata" …
9:26 AM Ticket #1286 (Add support of id-base attribute to extension xml files) created by Nicklas Nordborg
It would be practical to be able to define a top-level 'id-base' …
9:22 AM Changeset [4872] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Added …

Apr 1, 2009:

2:58 PM Changeset [4871] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Added …
1:38 PM Changeset [4870] by Nicklas Nordborg
References #1271: Add extension points to all toolbars Infrastructure …
9:16 AM DownloadPage edited by Jari Häkkinen
No need to leave non-linked package names (diff)
8:27 AM DownloadPage edited by Martin Svensson
Updated the download table; removed older versions(2.4.6 or older) and … (diff)

Mar 31, 2009:

2:21 PM Changeset [4869] by Martin Svensson
Fixes #1281 Change display-format of Biowell coordinates.
2:21 PM Ticket #1281 (Change display-format of Biowell coordinates) closed by Martin Svensson
fixed: (In [4869]) Fixes #1281 Change display-format of Biowell coordinates.
1:54 PM Changeset [4868] by Nicklas Nordborg
References #1270: Online editing of text files Forgot to add the icon.
1:23 PM Changeset [4867] by Nicklas Nordborg
Fixes #1270: Online editing of text files
1:23 PM Ticket #1270 (Online editing of text files) closed by Nicklas Nordborg
fixed: (In [4867]) Fixes #1270: Online editing of text files
1:13 PM Ticket #1285 (MeV TDMS file creation problem) closed by Jari Häkkinen
invalid: Moved to http://baseplugins.thep.lu.se/ticket/194
12:30 PM Ticket #1285 (MeV TDMS file creation problem) created by Jari Häkkinen
I think this issue belongs to BASE core/web. I am using the brilliant …
9:36 AM Changeset [4866] by Martin Svensson
Fixes #1282 Change display-format of well coordinates.
9:36 AM Ticket #1282 (Change display-format of well coordinates) closed by Martin Svensson
fixed: (In [4866]) Fixes #1282 Change display-format of well coordinates.
9:31 AM Ticket #1284 (Viev and download icons for file should show file size) closed by Nicklas Nordborg
fixed: (In [4865]) Fixes #1284: Viev and download icons for file should show …
9:31 AM Changeset [4865] by Nicklas Nordborg
Fixes #1284: Viev and download icons for file should show file size
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