Timeline
Apr 8, 2009:
- 10:29 AM Changeset [4894] by
- References #1271: Add extension points to all toolbars Toolbar …
- 10:17 AM Changeset [4893] by
- Fixes #1295: Downloading files with space characters in the filename …
- 10:17 AM Ticket #1295 (Downloading files with space characters in the filename will suggest ...) closed by
- fixed: (In [4893]) Fixes #1295: Downloading files with space characters in …
- 10:05 AM Ticket #1296 (Disallow quote characters in file names) closed by
- fixed: (In [4892]) Fixes #1296: Disallow quote characters in file names
- 10:05 AM Changeset [4892] by
- Fixes #1296: Disallow quote characters in file names
- 9:22 AM Ticket #1296 (Disallow quote characters in file names) created by
- It should probably have been in the list of "forbidden" characters to …
- 8:39 AM Ticket #1295 (Downloading files with space characters in the filename will suggest ...) created by
- I am not sure if this is a BASE problem but it is annoying because, in …
- 7:43 AM Ticket #1294 (Limit the vertical size of "Projects", "New messages" and "News and ...) created by
- As a university core facility our staff have many projects and in …
Apr 7, 2009:
- 9:50 AM Ticket #1290 (Change source files to UTF-8) closed by
- fixed
- 9:48 AM Changeset [4891] by
- Fixes #1291: Batch importing same labeled extract in more than one …
- 9:48 AM Ticket #1291 (Batch importing same labeled extract in more than one array on a ...) closed by
- fixed: (In [4891]) Fixes #1291: Batch importing same labeled extract in more …
- 9:03 AM Changeset [4890] by
- Fixes #1292: Use colours when reporting job status in a pop-up
- 9:03 AM Ticket #1292 (Use colours when reporting job status in a pop-up) closed by
- fixed: (In [4890]) Fixes #1292: Use colours when reporting job status in a pop-up
Apr 6, 2009:
- 4:51 PM Ticket #1293 (Changing name of the 'File' entry in the top toolbar to 'BASE') created by
- The content of the 'File' menu entry does not look like a standard …
- 4:47 PM Ticket #1292 (Use colours when reporting job status in a pop-up) created by
- Sometimes the error message in the job pop-up can be hard to spot. Can …
- 4:45 PM Ticket #1291 (Batch importing same labeled extract in more than one array on a ...) created by
- I noticed that trying to batch import a multi-array hybridization with …
- 2:52 PM Changeset [4889] by
- References #1290: Change source files to UTF-8 Changed 'Hakkinen' to …
- 2:15 PM Changeset [4888] by
- References #1290: Change source files to UTF-8 All *.java, *.jsp and …
- 12:38 PM Ticket #1290 (Change source files to UTF-8) created by
- I think it is time to convert all our source code files to use UTF-8 …
- 9:58 AM Changeset [4887] by
- Fixes #1271: Add extension points to all toolbars All toolbars should …
- 9:58 AM Ticket #1271 (Add extension points to all toolbars) closed by
- fixed: (In [4887]) Fixes #1271: Add extension points to all toolbars All …
Apr 3, 2009:
- 3:02 PM Changeset [4886] by
- References #1271: Add extension points to all toolbars Added code for …
- 1:50 PM Changeset [4885] by
- References #1289: Biomaterial classes should implement the Registered …
- 1:49 PM Changeset [4884] by
- References #1271: Add extension points to all toolbars Added code for …
- 1:01 PM Changeset [4883] by
- References #1281 Updates a missed title
- 12:53 PM Changeset [4882] by
- References #1271: Add extension points to all toolbars Added code for …
- 12:40 PM Changeset [4881] by
- References #1289: Biomaterial classes should implement the Registered …
- 11:39 AM Changeset [4880] by
- Fixes #1289: Biomaterial classes should implement the Registered interface
- 11:39 AM Ticket #1289 (Biomaterial classes should implement the Registered interface) closed by
- fixed: (In [4880]) Fixes #1289: Biomaterial classes should implement the …
- 11:26 AM Changeset [4879] by
- References #1271: Add extension points to all toolbars Added code for …
- 11:24 AM Ticket #1289 (Biomaterial classes should implement the Registered interface) created by
- The Registered interface was introduced by #1166. But it was only …
- 9:05 AM Changeset [4878] by
- References #1271: Add extension points to all toolbars Added …
- 8:32 AM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) closed by
- fixed: See related tickets: #1281, #1282
- 8:13 AM Changeset [4877] by
- References #1288: Tables doesn't indicate if there is a filter on a …
- 8:10 AM Changeset [4876] by
- Fixes #1288: Tables doesn't indicate if there is a filter on a …
- 8:10 AM Ticket #1288 (Tables doesn't indicate if there is a filter on a property that ...) closed by
- fixed: (In [4876]) Fixes #1288: Tables doesn't indicate if there is a filter …
- 8:08 AM Ticket #1288 (Tables doesn't indicate if there is a filter on a property that ...) created by
- If you filter a table manually there is a small "filter" icon …
Apr 2, 2009:
- 1:59 PM Changeset [4875] by
- Fixes #1287: Make it possible to update an extension to another …
- 1:59 PM Ticket #1287 (Make it possible to update an extension to another extension point) closed by
- fixed: (In [4875]) Fixes #1287: Make it possible to update an extension to …
- 1:56 PM Ticket #1287 (Make it possible to update an extension to another extension point) created by
- There is currently a problem if an update is made to a registered …
- 12:40 PM Ticket #1286 (Add support of id-base attribute to extension xml files) closed by
- fixed: (In [4874]) Fixes #1286: Add support of id-base attribute to extension …
- 12:40 PM Changeset [4874] by
- Fixes #1286: Add support of id-base attribute to extension xml files
- 10:58 AM Changeset [4873] by
- Fixes #1274 Disable/hide "Validate" and "Extract metadata" options on …
- 10:58 AM Ticket #1274 (Disable/hide "Validate" and "Extract metadata" options on the "Data ...) closed by
- fixed: (In [4873]) Fixes #1274 Disable/hide "Validate" and "Extract metadata" …
- 9:26 AM Ticket #1286 (Add support of id-base attribute to extension xml files) created by
- It would be practical to be able to define a top-level 'id-base' …
- 9:22 AM Changeset [4872] by
- References #1271: Add extension points to all toolbars Added …
Apr 1, 2009:
- 2:58 PM Changeset [4871] by
- References #1271: Add extension points to all toolbars Added …
- 1:38 PM Changeset [4870] by
- References #1271: Add extension points to all toolbars Infrastructure …
- 9:16 AM DownloadPage edited by
- No need to leave non-linked package names (diff)
- 8:27 AM DownloadPage edited by
- Updated the download table; removed older versions(2.4.6 or older) and … (diff)
Mar 31, 2009:
- 2:21 PM Changeset [4869] by
- Fixes #1281 Change display-format of Biowell coordinates.
- 2:21 PM Ticket #1281 (Change display-format of Biowell coordinates) closed by
- fixed: (In [4869]) Fixes #1281 Change display-format of Biowell coordinates.
- 1:54 PM Changeset [4868] by
- References #1270: Online editing of text files Forgot to add the icon.
- 1:23 PM Changeset [4867] by
- Fixes #1270: Online editing of text files
- 1:23 PM Ticket #1270 (Online editing of text files) closed by
- fixed: (In [4867]) Fixes #1270: Online editing of text files
- 1:13 PM Ticket #1285 (MeV TDMS file creation problem) closed by
- invalid: Moved to http://baseplugins.thep.lu.se/ticket/194
- 12:30 PM Ticket #1285 (MeV TDMS file creation problem) created by
- I think this issue belongs to BASE core/web. I am using the brilliant …
- 9:36 AM Changeset [4866] by
- Fixes #1282 Change display-format of well coordinates.
- 9:36 AM Ticket #1282 (Change display-format of well coordinates) closed by
- fixed: (In [4866]) Fixes #1282 Change display-format of well coordinates.
- 9:31 AM Ticket #1284 (Viev and download icons for file should show file size) closed by
- fixed: (In [4865]) Fixes #1284: Viev and download icons for file should show …
- 9:31 AM Changeset [4865] by
- Fixes #1284: Viev and download icons for file should show file size
Mar 30, 2009:
- 7:38 PM Ticket #1284 (Viev and download icons for file should show file size) created by
- There are a lot of places in the BASE web interface where …
- 4:48 PM Ticket #1283 (Table exporter refuses to start if download immediately is disabled) closed by
- invalid: The table exporter must always be executed immediately, since it …
- 3:46 PM Ticket #1283 (Table exporter refuses to start if download immediately is disabled) created by
- ... even if a target file name is selected. The plug-in displays …
- 9:29 AM Milestone BASE 2.11 completed
- This milestone will target performance issues.
- 9:18 AM Changeset [4864] by
- Merged pre-2.11 changes to the trunk.
- 9:07 AM DownloadPage edited by
- Releasing BASE 2.11 (diff)
- 9:03 AM Changeset [4863] by
- Changes for future release 2.11.1
- 8:49 AM Changeset [4862] by
- Tagging version 2.11
- 8:48 AM Changeset [4861] by
- Preparing release 2.11
- 8:30 AM ReleaseProcedure edited by
- Removed steps including copyright updates, since we are never doing … (diff)
Mar 27, 2009:
- 3:45 PM Changeset [4860] by
- References #1282 Use WellCoordinateFormatter? to view row as a …
- 2:23 PM Changeset [4859] by
- Fixes #1273: Make it easier to develop plug-ins and extensions as a …
- 2:23 PM Ticket #1273 (Make it easier to develop plug-ins and extensions as a single package) closed by
- fixed: (In [4859]) Fixes #1273: Make it easier to develop plug-ins and …
- 1:52 PM Ticket #1282 (Change display-format of well coordinates) created by
- The format of how well(array LIMS) coordinates are displayed should be …
- 1:49 PM Ticket #1281 (Change display-format of Biowell coordinates) created by
- The format of how biowell coordinates are displayed should be like …
- 12:57 PM Changeset [4858] by
- References #1266, #1272: Bioplate coordinates are numbers but it would …
- 12:47 PM Changeset [4857] by
- Fixes #1259: Exporting spot data (with table exporter): Bioassay …
- 12:47 PM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) closed by
- fixed: (In [4857]) Fixes #1259: Exporting spot data (with table exporter): …
- 11:14 AM Changeset [4856] by
- References #1266, #1272: Bioplate coordinates are numbers but it would …
- 11:11 AM Changeset [4855] by
- Fixes #1272: Add support for using Formatters to SimpleExporter? (aka. …
- 11:11 AM Ticket #1272 (Add support for using Formatters to SimpleExporter (aka. table exporter)) closed by
- fixed: (In [4855]) Fixes #1272: Add support for using Formatters to …
- 9:53 AM Ticket #1280 (Versioned annotations of reporters) created by
- In BASE today there is only one set of reporter annotations but it …
Mar 26, 2009:
- 4:11 PM Ticket #1279 (Mark directories for removal when "parent" item is marked for removal) created by
- Related to ticket:1149 Some plug-ins create directories and files …
- 2:08 PM Ticket #1276 (Edit annotationtype - Moving unit from 'do not use' to 'Use units' ...) closed by
- fixed: (In [4854]) Fixes #1276 Edit annotationtype - Moving unit from 'do not …
- 2:08 PM Changeset [4854] by
- Fixes #1276 Edit annotationtype - Moving unit from 'do not use' to …
- 1:19 PM Changeset [4853] by
- Fixes #1278: Bioplate single-item page has a left-over toolbar button
- 1:19 PM Ticket #1278 (Bioplate single-item page has a left-over toolbar button) closed by
- fixed: (In [4853]) Fixes #1278: Bioplate single-item page has a left-over …
- 1:17 PM Ticket #1278 (Bioplate single-item page has a left-over toolbar button) created by
- The button "Bioplate act" doesn't do anything and should be removed.
- 1:16 PM Ticket #1277 (Export button on Biowells list page leads to non-existing url) closed by
- fixed: (In [4852]) Fixes #1277: Export button on Biowells list page leads to …
- 1:16 PM Changeset [4852] by
- Fixes #1277: Export button on Biowells list page leads to non-existing …
- 1:07 PM Ticket #1277 (Export button on Biowells list page leads to non-existing url) created by
- 1. Navigate to a Bioplate and select the Biowells tab. 2. Click on …
- 12:58 PM Changeset [4851] by
- Remove debug output.
- 10:53 AM Changeset [4850] by
- References #1240: Implement "lazy loading" in the generic "item …
- 10:50 AM Changeset [4849] by
- References #1240: Implement "lazy loading" in the generic "item …
- 9:52 AM Ticket #1276 (Edit annotationtype - Moving unit from 'do not use' to 'Use units' ...) created by
- Error message is: Object doesn't support this property or method
- 9:12 AM Ticket #1275 (Item overview doesn't load array slide associated with hybridization ...) closed by
- fixed: (In [4848]) Fixes #1275: Item overview doesn't load array slide …
- 9:12 AM Changeset [4848] by
- Fixes #1275: Item overview doesn't load array slide associated with …
- 9:07 AM Ticket #1275 (Item overview doesn't load array slide associated with hybridization ...) created by
- I think it has to do with the check of the parent item type, which in …
- 9:07 AM Changeset [4847] by
- References #1240. Do not use lazy-icons in the item-tree when a node's …
- 8:07 AM Ticket #1274 (Disable/hide "Validate" and "Extract metadata" options on the "Data ...) created by
- On the "Data files" tab in the edit dialog of raw bioassays and array …
- 8:02 AM Ticket #1273 (Make it easier to develop plug-ins and extensions as a single package) created by
- This is not so streamlined at the moment. Since extensions are …
Mar 25, 2009:
- 10:01 PM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) reopened by
- 8:30 PM Ticket #1272 (Add support for using Formatters to SimpleExporter (aka. table exporter)) created by
- The typical use case for a Formatter is to format a raw value into a …
- 8:10 PM Ticket #1271 (Add extension points to all toolbars) created by
- The extension system that was developed some time ago for BASE can be …
- 7:57 PM Ticket #1270 (Online editing of text files) created by
- Add a function that allows online editing of text files on the BASE …
- 2:14 PM Changeset [4846] by
- Changes for future release 2.12
- 2:13 PM Changeset [4845] by
- Forking new minor version 2.11 branch
- 1:23 PM Changeset [4844] by
- Fixes #1269: Biomaterial batch importers should use alphanumeric …
- 1:23 PM Ticket #1269 (Biomaterial batch importers should use alphanumeric coordinate system ...) closed by
- fixed: (In [4844]) Fixes #1269: Biomaterial batch importers should use …
- 1:12 PM Changeset [4843] by
- References #1243: Fix TestBioAssaySetExporter? and include it in …
- 11:25 AM Ticket #1269 (Biomaterial batch importers should use alphanumeric coordinate system ...) created by
- See #1266 for a background. I think this needs to go in as soon as …
- 8:57 AM Ticket #1240 (Implement "lazy loading" in the generic "item overview") closed by
- fixed: (In [4842]) Fixes #1240. Implement "lazy loading" in the generic "item …
- 8:57 AM Changeset [4842] by
- Fixes #1240. Implement "lazy loading" in the generic "item overview".
- 8:42 AM Changeset [4841] by
- References #1238: Check performance of BioAssaySetExporter? Fixes …
Mar 24, 2009:
- 3:55 PM Changeset [4840] by
- References #1240. The functionallity in the webclient is done. The …
- 1:27 PM Changeset [4839] by
- Fixes #1268: Can't use filter on list page until it has been loaded …
- 1:27 PM Ticket #1268 (Can't use filter on list page until it has been loaded completely) closed by
- fixed: (In [4839]) Fixes #1268: Can't use filter on list page until it has …
- 1:10 PM Ticket #1242 (Generate <img> tag for spot images with a class attribute) closed by
- fixed: (In [4838]) Fixes #1242: Generate <img> tag for spot images with a …
- 1:10 PM Changeset [4838] by
- Fixes #1242: Generate <img> tag for spot images with a class attribute …
- 12:55 PM Ticket #1232 (Long running getAllInheritedAnnotations query) closed by
- worksforme
- 11:24 AM Changeset [4837] by
- Fixes #1265: Hybridization batch importer should set "number of …
- 11:24 AM Ticket #1265 (Hybridization batch importer should set "number of arrays" automatically) closed by
- fixed: (In [4837]) Fixes #1265: Hybridization batch importer should set …
- 11:10 AM Ticket #1264 (Raw bioassay batch importer should set array design automatically) closed by
- fixed: (In [4836]) Fixes #1264: Raw bioassay batch importer should set array …
- 11:10 AM Changeset [4836] by
- Fixes #1264: Raw bioassay batch importer should set array design …
- 9:26 AM Ticket #1268 (Can't use filter on list page until it has been loaded completely) created by
- ... and as a consequence I may get the message as displayed in the …
- 9:22 AM Changeset [4835] by
- Merged patch release 2.10.1 to the trunk.
- 9:16 AM Changeset [4834] by
- Changes for future release 2.10.2
- 9:15 AM Milestone BASE 2.10.1 completed
- Bug fixes for 2.10. Revision Log: log:branches/2.10-stable@4787:4833
- 9:15 AM DownloadPage edited by
- Releasing BASE 2.10.1 (diff)
- 8:48 AM Changeset [4833] by
- Tagging version 2.10.1
- 8:48 AM Changeset [4832] by
- Preparing release 2.10.1
- 8:35 AM Ticket #1253 (plainMatrixExport documentation needs to be clarified) closed by
- invalid: Hmm.. just checked the (Javadoc) documentation. It says: The row is …
- 8:28 AM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) closed by
- fixed: (In [4831]) Fixes #1260: Incorrect title on import dialog when opened …
- 8:28 AM Changeset [4831] by
- Fixes #1260: Incorrect title on import dialog when opened from array …
Mar 23, 2009:
- 6:00 PM Ticket #1267 (The nice colourful display of ratios in experiment explorer should ...) closed by
- worksforme: This can be configured on the formula.
- 5:26 PM Ticket #1267 (The nice colourful display of ratios in experiment explorer should ...) created by
- I have users requesting the colour square also for M values. Is this …
- 5:24 PM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) created by
- Bioplate row/col coordinates are numbers [0..n,0..m] whereas the …
- 4:46 PM Changeset [4830] by
- References #1240. Some adjustments on menuitems' tooltip- and cursor- …
- 3:36 PM Ticket #1261 (Global cache for static data) closed by
- fixed
- 3:28 PM Changeset [4829] by
- Fixes #903: Experiment Explorer is slow Store list of position in the …
- 3:28 PM Ticket #903 (Experiment Explorer is slow) closed by
- fixed: (In [4829]) Fixes #903: Experiment Explorer is slow Store list of …
- 1:10 PM Changeset [4828] by
- Fixes #1262: Overview and correction factor plots should use the …
- 1:10 PM Ticket #1262 (Overview and correction factor plots should use the static cache) closed by
- fixed: (In [4828]) Fixes #1262: Overview and correction factor plots should …
- 1:09 PM Changeset [4827] by
- References #1261: Global cache for static data The cache is now …
Mar 21, 2009:
- 11:45 AM Ticket #1263 (Set some values automatically when creating items with the batch importers) closed by
- duplicate: Part i) of this ticket is now replaced by #1264 and #1265. Part ii) …
- 11:44 AM Ticket #1265 (Hybridization batch importer should set "number of arrays" automatically) created by
- This should happen in a similar way as in the GUI if: * The value …
- 11:42 AM Ticket #1264 (Raw bioassay batch importer should set array design automatically) created by
- This should happen in a similar way as in the GUI if: * No array …
Mar 20, 2009:
- 8:08 PM Changeset [4826] by
- Added missing file
- 4:33 PM Ticket #1263 (Set some values automatically when creating items with the batch importers) created by
- In the tickets referenced below some smartness was added to the GUI …
- 3:41 PM Changeset [4825] by
- References #1262: Overview and correction factor plots should use the …
- 3:40 PM Changeset [4824] by
- References #1261: Global cache for static data A prototype …
- 11:19 AM Ticket #1262 (Overview and correction factor plots should use the static cache) created by
- There is no need to re-generate the plots every time a user visits the …
- 8:58 AM Ticket #1261 (Global cache for static data) created by
- Implement a global, file-based, cache that can be used to store …
Mar 19, 2009:
- 4:08 PM Changeset [4823] by
- References #1240. The node-icons are getting updated when expanding …
- 3:28 PM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) created by
- Clicking of the import button starts the hybridization importer?? …
- 2:06 PM Changeset [4822] by
- Fixes #1255: Make annotation importer handle units
- 2:06 PM Ticket #1255 (Make annotation importer handle units) closed by
- fixed: (In [4822]) Fixes #1255: Make annotation importer handle units
- 9:13 AM Ticket #1216 (Annotation importer selects "wrong" configuration) closed by
- worksforme: Closing this ticket since no feedback has been provided.
- 9:12 AM Ticket #1079 (Raw data import takes very long time to fail when user exceeds quota) closed by
- invalid: Closing this ticket since no feedback has been provided.
- 9:12 AM Ticket #1195 (Problem when importing negative values for annotations with float as ...) closed by
- invalid: Closing this ticket since no feedback has been provided.
- 9:05 AM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) closed by
- wontfix: Since it is a bad idea to repeat the query I think the core should not …
Mar 18, 2009:
- 3:42 PM Changeset [4821] by
- References #1238: Check performance of BioAssaySetExporter? Need …
- 2:18 PM Changeset [4820] by
- References #1238: Check performance of BioAssaySetExporter? Fixes a …
- 2:10 PM Changeset [4819] by
- References #1248: Long running job may cause a timeout on session on …
Mar 17, 2009:
- 11:44 AM Ticket #1244 (Incorrect documentation in MenuItemAction) closed by
- fixed: (In [4818]) Fixes #1244: Incorrect documentation in MenuItemAction?
- 11:44 AM Changeset [4818] by
- Fixes #1244: Incorrect documentation in MenuItemAction?
- 10:53 AM Ticket #1251 (Improvements of the 'performance' test program) closed by
- fixed
- 10:53 AM Ticket #1238 (Check performance of BioAssaySetExporter) closed by
- fixed
- 9:07 AM Changeset [4817] by
- References #903: Experiment Explorer is slow Testing the idea of …
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