Timeline
Mar 31, 2009:
- 2:21 PM Changeset [4869] by
- Fixes #1281 Change display-format of Biowell coordinates.
- 2:21 PM Ticket #1281 (Change display-format of Biowell coordinates) closed by
- fixed: (In [4869]) Fixes #1281 Change display-format of Biowell coordinates.
- 1:54 PM Ticket #1270 (Online editing of text files) updated by
- (In [4868]) References #1270: Online editing of text files Forgot to …
- 1:54 PM Changeset [4868] by
- References #1270: Online editing of text files Forgot to add the icon.
- 1:50 PM Ticket #1271 (Add extension points to all toolbars) updated by
-
Status, Owner changed
- 1:23 PM Changeset [4867] by
- Fixes #1270: Online editing of text files
- 1:23 PM Ticket #1270 (Online editing of text files) closed by
- fixed: (In [4867]) Fixes #1270: Online editing of text files
- 1:13 PM Ticket #1285 (MeV TDMS file creation problem) closed by
- invalid: Moved to http://baseplugins.thep.lu.se/ticket/194
- 12:59 PM Ticket #1285 (MeV TDMS file creation problem) updated by
- This ticket should be moved to MeV Launcher on the BASE plug-ins site. …
- 12:30 PM Ticket #1285 (MeV TDMS file creation problem) created by
- I think this issue belongs to BASE core/web. I am using the brilliant …
- 9:36 AM Ticket #1281 (Change display-format of Biowell coordinates) updated by
-
Status changed
- 9:36 AM Changeset [4866] by
- Fixes #1282 Change display-format of well coordinates.
- 9:36 AM Ticket #1282 (Change display-format of well coordinates) closed by
- fixed: (In [4866]) Fixes #1282 Change display-format of well coordinates.
- 9:31 AM Ticket #1284 (Viev and download icons for file should show file size) closed by
- fixed: (In [4865]) Fixes #1284: Viev and download icons for file should show …
- 9:31 AM Changeset [4865] by
- Fixes #1284: Viev and download icons for file should show file size
Mar 30, 2009:
- 7:38 PM Ticket #1284 (Viev and download icons for file should show file size) created by
- There are a lot of places in the BASE web interface where …
- 6:06 PM Ticket #1283 (Table exporter refuses to start if download immediately is disabled) updated by
-
Description changed
- 5:40 PM Ticket #1283 (Table exporter refuses to start if download immediately is disabled) updated by
- I suppose that the "Allow immediate execution" must exist for the …
- 4:48 PM Ticket #1283 (Table exporter refuses to start if download immediately is disabled) closed by
- invalid: The table exporter must always be executed immediately, since it …
- 3:46 PM Ticket #1283 (Table exporter refuses to start if download immediately is disabled) created by
- ... even if a target file name is selected. The plug-in displays …
- 9:29 AM Milestone BASE 2.11 completed
- This milestone will target performance issues.
- 9:18 AM Changeset [4864] by
- Merged pre-2.11 changes to the trunk.
- 9:07 AM DownloadPage edited by
- Releasing BASE 2.11 (diff)
- 9:03 AM Changeset [4863] by
- Changes for future release 2.11.1
- 8:49 AM Changeset [4862] by
- Tagging version 2.11
- 8:48 AM Changeset [4861] by
- Preparing release 2.11
- 8:30 AM ReleaseProcedure edited by
- Removed steps including copyright updates, since we are never doing … (diff)
- 8:25 AM Ticket #1280 (Versioned annotations of reporters) updated by
- I don't think this ticket requires a BASE 3 no matter what technical …
Mar 27, 2009:
- 3:45 PM Changeset [4860] by
- References #1282 Use WellCoordinateFormatter to view row as a …
- 3:45 PM Ticket #1282 (Change display-format of well coordinates) updated by
- (In [4860]) References #1282 Use WellCoordinateFormatter to view row …
- 2:55 PM Ticket #1282 (Change display-format of well coordinates) updated by
-
Type changed
- 2:55 PM Ticket #1270 (Online editing of text files) updated by
-
Owner, Status changed
- 2:23 PM Changeset [4859] by
- Fixes #1273: Make it easier to develop plug-ins and extensions as a …
- 2:23 PM Ticket #1273 (Make it easier to develop plug-ins and extensions as a single package) closed by
- fixed: (In [4859]) Fixes #1273: Make it easier to develop plug-ins and …
- 1:55 PM Ticket #1282 (Change display-format of well coordinates) updated by
-
Status changed
- 1:55 PM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
- This ticket is split into two sub tickets * Array LIMS ticket …
- 1:52 PM Ticket #1282 (Change display-format of well coordinates) created by
- The format of how well(array LIMS) coordinates are displayed should be …
- 1:49 PM Ticket #1281 (Change display-format of Biowell coordinates) created by
- The format of how biowell coordinates are displayed should be like …
- 12:59 PM Ticket #1273 (Make it easier to develop plug-ins and extensions as a single package) updated by
-
Owner, Status changed
- 12:57 PM Changeset [4858] by
- References #1266, #1272: Bioplate coordinates are numbers but it would …
- 12:57 PM Tickets #1272,1266 batch updated by
- (In [4858]) References #1266, #1272: Bioplate coordinates are numbers …
- 12:49 PM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
-
Status, Owner changed
- 12:47 PM Changeset [4857] by
- Fixes #1259: Exporting spot data (with table exporter): Bioassay …
- 12:47 PM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) closed by
- fixed: (In [4857]) Fixes #1259: Exporting spot data (with table exporter): …
- 11:35 AM Ticket #1280 (Versioned annotations of reporters) updated by
- Replying to nicklas: > This will of course not be able to …
- 11:17 AM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) updated by
-
Status, Owner changed
- 11:14 AM Changeset [4856] by
- References #1266, #1272: Bioplate coordinates are numbers but it would …
- 11:14 AM Tickets #1272,1266 batch updated by
- (In [4856]) References #1266, #1272: Bioplate coordinates are numbers …
- 11:11 AM Changeset [4855] by
- Fixes #1272: Add support for using Formatters to SimpleExporter (aka. …
- 11:11 AM Ticket #1272 (Add support for using Formatters to SimpleExporter (aka. table exporter)) closed by
- fixed: (In [4855]) Fixes #1272: Add support for using Formatters to …
- 10:54 AM Ticket #1280 (Versioned annotations of reporters) updated by
- This will of course not be able to do without negative impact of …
- 9:53 AM Ticket #1280 (Versioned annotations of reporters) created by
- In BASE today there is only one set of reporter annotations but it …
Mar 26, 2009:
- 4:11 PM Ticket #1279 (Mark directories for removal when "parent" item is marked for removal) created by
- Related to ticket:1149 Some plug-ins create directories and files …
- 2:08 PM Ticket #1276 (Edit annotationtype - Moving unit from 'do not use' to 'Use units' ...) closed by
- fixed: (In [4854]) Fixes #1276 Edit annotationtype - Moving unit from 'do not …
- 2:08 PM Changeset [4854] by
- Fixes #1276 Edit annotationtype - Moving unit from 'do not use' to …
- 1:51 PM Ticket #1277 (Export button on Biowells list page leads to non-existing url) updated by
-
Milestone changed
- 1:19 PM Changeset [4853] by
- Fixes #1278: Bioplate single-item page has a left-over toolbar button
- 1:19 PM Ticket #1278 (Bioplate single-item page has a left-over toolbar button) closed by
- fixed: (In [4853]) Fixes #1278: Bioplate single-item page has a left-over …
- 1:17 PM Ticket #1278 (Bioplate single-item page has a left-over toolbar button) created by
- The button "Bioplate act" doesn't do anything and should be removed.
- 1:16 PM Ticket #1277 (Export button on Biowells list page leads to non-existing url) closed by
- fixed: (In [4852]) Fixes #1277: Export button on Biowells list page leads to …
- 1:16 PM Changeset [4852] by
- Fixes #1277: Export button on Biowells list page leads to non-existing …
- 1:07 PM Ticket #1277 (Export button on Biowells list page leads to non-existing url) updated by
-
Owner, Status changed
- 1:07 PM Ticket #1277 (Export button on Biowells list page leads to non-existing url) created by
- 1. Navigate to a Bioplate and select the Biowells tab. 2. Click on …
- 12:58 PM Changeset [4851] by
- Remove debug output.
- 12:25 PM Ticket #1272 (Add support for using Formatters to SimpleExporter (aka. table exporter)) updated by
-
Owner, Priority, Status changed
- 10:53 AM Changeset [4850] by
- References #1240: Implement "lazy loading" in the generic "item …
- 10:53 AM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by
- (In [4850]) References #1240: Implement "lazy loading" in the generic …
- 10:50 AM Changeset [4849] by
- References #1240: Implement "lazy loading" in the generic "item …
- 10:50 AM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by
- (In [4849]) References #1240: Implement "lazy loading" in the generic …
- 9:52 AM Ticket #1276 (Edit annotationtype - Moving unit from 'do not use' to 'Use units' ...) created by
- Error message is: Object doesn't support this property or method
- 9:12 AM Ticket #1275 (Item overview doesn't load array slide associated with hybridization ...) closed by
- fixed: (In [4848]) Fixes #1275: Item overview doesn't load array slide …
- 9:12 AM Changeset [4848] by
- Fixes #1275: Item overview doesn't load array slide associated with …
- 9:08 AM Ticket #1275 (Item overview doesn't load array slide associated with hybridization ...) updated by
-
Owner, Status changed
- 9:07 AM Ticket #1275 (Item overview doesn't load array slide associated with hybridization ...) created by
- I think it has to do with the check of the parent item type, which in …
- 9:07 AM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by
- (In [4847]) References #1240. Do not use lazy-icons in the item-tree …
- 9:07 AM Changeset [4847] by
- References #1240. Do not use lazy-icons in the item-tree when a node's …
- 8:07 AM Ticket #1274 (Disable/hide "Validate" and "Extract metadata" options on the "Data ...) created by
- On the "Data files" tab in the edit dialog of raw bioassays and array …
- 8:02 AM Ticket #1273 (Make it easier to develop plug-ins and extensions as a single package) created by
- This is not so streamlined at the moment. Since extensions are …
Mar 25, 2009:
- 10:01 PM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) updated by
-
Owner, Status changed
- 10:01 PM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) reopened by
- 10:01 PM Ticket #1272 (Add support for using Formatters to SimpleExporter (aka. table exporter)) updated by
- Yes. I am re-opening #1259.
- 9:11 PM Ticket #1272 (Add support for using Formatters to SimpleExporter (aka. table exporter)) updated by
- Would this also target the issue discussed in ticket:1259?
- 8:34 PM Ticket #1128 (Export of child items) updated by
-
Milestone, Summary changed
See ticket #1272 for a possible way to solve this issue. - 8:32 PM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
-
Milestone changed
See ticket #1272 for a possible way to solve the table export issue. - 8:30 PM Ticket #1272 (Add support for using Formatters to SimpleExporter (aka. table exporter)) created by
- The typical use case for a Formatter is to format a raw value into a …
- 8:10 PM Ticket #1271 (Add extension points to all toolbars) created by
- The extension system that was developed some time ago for BASE can be …
- 7:57 PM Ticket #1270 (Online editing of text files) created by
- Add a function that allows online editing of text files on the BASE …
- 2:14 PM Changeset [4846] by
- Changes for future release 2.12
- 2:13 PM Changeset [4845] by
- Forking new minor version 2.11 branch
- 1:23 PM Changeset [4844] by
- Fixes #1269: Biomaterial batch importers should use alphanumeric …
- 1:23 PM Ticket #1269 (Biomaterial batch importers should use alphanumeric coordinate system ...) closed by
- fixed: (In [4844]) Fixes #1269: Biomaterial batch importers should use …
- 1:12 PM Ticket #1243 (Fix TestBioAssaySetExporter and include it in TestAll) updated by
- (In [4843]) References #1243: Fix TestBioAssaySetExporter and include …
- 1:12 PM Changeset [4843] by
- References #1243: Fix TestBioAssaySetExporter and include it in …
- 11:27 AM Ticket #1269 (Biomaterial batch importers should use alphanumeric coordinate system ...) updated by
-
Owner, Status changed
- 11:27 AM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
- Batch importer changes now has it's own ticket #1269. Since it is a …
- 11:25 AM Ticket #1269 (Biomaterial batch importers should use alphanumeric coordinate system ...) created by
- See #1266 for a background. I think this needs to go in as soon as …
- 10:02 AM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
- Replying to nicklas: > > The same system is used for …
- 9:54 AM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
- > The same system is used for plates in the array lims section. This …
- 8:57 AM Ticket #1240 (Implement "lazy loading" in the generic "item overview") closed by
- fixed: (In [4842]) Fixes #1240. Implement "lazy loading" in the generic "item …
- 8:57 AM Changeset [4842] by
- Fixes #1240. Implement "lazy loading" in the generic "item overview".
- 8:42 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- (In [4841]) References #1238: Check performance of BioAssaySetExporter …
- 8:42 AM Changeset [4841] by
- References #1238: Check performance of BioAssaySetExporter Fixes …
Mar 24, 2009:
- 3:55 PM Changeset [4840] by
- References #1240. The functionallity in the webclient is done. The …
- 3:55 PM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by
- (In [4840]) References #1240. The functionallity in the webclient is …
- 3:15 PM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
- 96-plates have [A..H,1..12] 384-plates have [A..P,1..24] 1536 is …
- 3:14 PM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
- Replying to jari: > For consistency we should make the …
- 1:27 PM Ticket #1268 (Can't use filter on list page until it has been loaded completely) updated by
-
Priority, Milestone changed
- 1:27 PM Changeset [4839] by
- Fixes #1268: Can't use filter on list page until it has been loaded …
- 1:27 PM Ticket #1268 (Can't use filter on list page until it has been loaded completely) closed by
- fixed: (In [4839]) Fixes #1268: Can't use filter on list page until it has …
- 1:10 PM Ticket #1242 (Generate <img> tag for spot images with a class attribute) closed by
- fixed: (In [4838]) Fixes #1242: Generate <img> tag for spot images with a …
- 1:10 PM Changeset [4838] by
- Fixes #1242: Generate <img> tag for spot images with a class attribute …
- 1:10 PM Ticket #1242 (Generate <img> tag for spot images with a class attribute) updated by
-
Status, Milestone, Summary, Owner, Priority changed
- 12:55 PM Ticket #1232 (Long running getAllInheritedAnnotations query) closed by
- worksforme
- 12:25 PM Ticket #1232 (Long running getAllInheritedAnnotations query) updated by
- I am not able to reproduce this on either PostgreSQL 8.3.6 or MySQL …
- 11:40 AM Ticket #1232 (Long running getAllInheritedAnnotations query) updated by
-
Status changed
- 11:40 AM Ticket #1232 (Long running getAllInheritedAnnotations query) updated by
-
Owner, Status changed
- 11:24 AM Changeset [4837] by
- Fixes #1265: Hybridization batch importer should set "number of …
- 11:24 AM Ticket #1265 (Hybridization batch importer should set "number of arrays" automatically) closed by
- fixed: (In [4837]) Fixes #1265: Hybridization batch importer should set …
- 11:10 AM Ticket #1264 (Raw bioassay batch importer should set array design automatically) closed by
- fixed: (In [4836]) Fixes #1264: Raw bioassay batch importer should set array …
- 11:10 AM Changeset [4836] by
- Fixes #1264: Raw bioassay batch importer should set array design …
- 10:39 AM Ticket #1264 (Raw bioassay batch importer should set array design automatically) updated by
-
Milestone, Owner, Status changed
- 10:39 AM Ticket #1265 (Hybridization batch importer should set "number of arrays" automatically) updated by
-
Status, Owner, Milestone changed
- 9:57 AM Ticket #1268 (Can't use filter on list page until it has been loaded completely) updated by
-
Summary changed
No page will be fully functional until it has been completely loaded. … - 9:26 AM Ticket #1268 (Can't use filter on list page until it has been loaded completely) created by
- ... and as a consequence I may get the message as displayed in the …
- 9:22 AM Changeset [4835] by
- Merged patch release 2.10.1 to the trunk.
- 9:16 AM Changeset [4834] by
- Changes for future release 2.10.2
- 9:15 AM Milestone BASE 2.10.1 completed
- Bug fixes for 2.10. Revision Log: log:branches/2.10-stable@4787:4833
- 9:15 AM DownloadPage edited by
- Releasing BASE 2.10.1 (diff)
- 8:55 AM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
- For consistency we should make the same change to the array LIMS …
- 8:49 AM Ticket #1253 (plainMatrixExport documentation needs to be clarified) updated by
- Replying to nicklas: > Hmm.. just checked the (Javadoc) …
- 8:48 AM Changeset [4833] by
- Tagging version 2.10.1
- 8:48 AM Changeset [4832] by
- Preparing release 2.10.1
- 8:35 AM Ticket #1253 (plainMatrixExport documentation needs to be clarified) closed by
- invalid: Hmm.. just checked the (Javadoc) documentation. It says: The row is …
- 8:28 AM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) closed by
- fixed: (In [4831]) Fixes #1260: Incorrect title on import dialog when opened …
- 8:28 AM Changeset [4831] by
- Fixes #1260: Incorrect title on import dialog when opened from array …
Mar 23, 2009:
- 6:11 PM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) updated by
- The same system is used for plates in the array lims section. Does …
- 6:08 PM Ticket #1267 (The nice colourful display of ratios in experiment explorer should ...) updated by
- Amazing ... I should read the nice manual! Thanks.
- 6:00 PM Ticket #1267 (The nice colourful display of ratios in experiment explorer should ...) closed by
- worksforme: This can be configured on the formula.
- 5:26 PM Ticket #1267 (The nice colourful display of ratios in experiment explorer should ...) created by
- I have users requesting the colour square also for M values. Is this …
- 5:24 PM Ticket #1266 (Bioplate coordinates are numbers but it would be better to have ...) created by
- Bioplate row/col coordinates are numbers [0..n,0..m] whereas the …
- 4:46 PM Changeset [4830] by
- References #1240. Some adjustments on menuitems' tooltip- and cursor- …
- 4:46 PM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by
- (In [4830]) References #1240. Some adjustments on menuitems' tooltip- …
- 3:36 PM Ticket #1261 (Global cache for static data) closed by
- fixed
- 3:28 PM Changeset [4829] by
- Fixes #903: Experiment Explorer is slow Store list of position in the …
- 3:28 PM Ticket #903 (Experiment Explorer is slow) closed by
- fixed: (In [4829]) Fixes #903: Experiment Explorer is slow Store list of …
- 1:10 PM Changeset [4828] by
- Fixes #1262: Overview and correction factor plots should use the …
- 1:10 PM Ticket #1262 (Overview and correction factor plots should use the static cache) closed by
- fixed: (In [4828]) Fixes #1262: Overview and correction factor plots should …
- 1:10 PM Ticket #1261 (Global cache for static data) updated by
-
Description changed
- 1:09 PM Changeset [4827] by
- References #1261: Global cache for static data The cache is now …
- 1:09 PM Ticket #1261 (Global cache for static data) updated by
- (In [4827]) References #1261: Global cache for static data The cache …
Mar 21, 2009:
- 11:45 AM Ticket #1263 (Set some values automatically when creating items with the batch importers) closed by
- duplicate: Part i) of this ticket is now replaced by #1264 and #1265. Part ii) …
- 11:44 AM Ticket #1265 (Hybridization batch importer should set "number of arrays" automatically) created by
- This should happen in a similar way as in the GUI if: * The value …
- 11:42 AM Ticket #1264 (Raw bioassay batch importer should set array design automatically) created by
- This should happen in a similar way as in the GUI if: * No array …
- 11:39 AM Ticket #1263 (Set some values automatically when creating items with the batch importers) updated by
- > the total number of arrays in the hybridization can be set during …
Mar 20, 2009:
- 10:03 PM Ticket #1263 (Set some values automatically when creating items with the batch importers) updated by
- Replying to nicklas: > i) This assumes that a scan has …
- 8:15 PM Ticket #1263 (Set some values automatically when creating items with the batch importers) updated by
- i) This assumes that a scan has been given and it should not be any …
- 8:08 PM Changeset [4826] by
- Added missing file
- 4:33 PM Ticket #1263 (Set some values automatically when creating items with the batch importers) created by
- In the tickets referenced below some smartness was added to the GUI …
- 3:41 PM Ticket #1262 (Overview and correction factor plots should use the static cache) updated by
- (In [4825]) References #1262: Overview and correction factor plots …
- 3:41 PM Changeset [4825] by
- References #1262: Overview and correction factor plots should use the …
- 3:40 PM Changeset [4824] by
- References #1261: Global cache for static data A prototype …
- 3:40 PM Ticket #1261 (Global cache for static data) updated by
- (In [4824]) References #1261: Global cache for static data A …
- 11:19 AM Ticket #1262 (Overview and correction factor plots should use the static cache) created by
- There is no need to re-generate the plots every time a user visits the …
- 11:17 AM Ticket #1261 (Global cache for static data) updated by
-
Status, Owner changed
- 8:58 AM Ticket #1261 (Global cache for static data) created by
- Implement a global, file-based, cache that can be used to store …
- 8:02 AM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) updated by
-
Summary, Priority changed
Mar 19, 2009:
- 4:53 PM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) updated by
- Replying to nicklas: > I think it is only an icorrect …
- 4:08 PM Changeset [4823] by
- References #1240. The node-icons are getting updated when expanding …
- 4:08 PM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by
- (In [4823]) References #1240. The node-icons are getting updated when …
- 3:40 PM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) updated by
- I think it is only an icorrect title... On my installation it is the …
- 3:28 PM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) created by
- Clicking of the import button starts the hybridization importer?? …
- 2:06 PM Changeset [4822] by
- Fixes #1255: Make annotation importer handle units
- 2:06 PM Ticket #1255 (Make annotation importer handle units) closed by
- fixed: (In [4822]) Fixes #1255: Make annotation importer handle units
- 9:53 AM Ticket #1255 (Make annotation importer handle units) updated by
-
Status, Owner, Milestone changed
- 9:13 AM Ticket #1216 (Annotation importer selects "wrong" configuration) closed by
- worksforme: Closing this ticket since no feedback has been provided.
- 9:12 AM Ticket #1079 (Raw data import takes very long time to fail when user exceeds quota) closed by
- invalid: Closing this ticket since no feedback has been provided.
- 9:12 AM Ticket #1195 (Problem when importing negative values for annotations with float as ...) closed by
- invalid: Closing this ticket since no feedback has been provided.
- 9:05 AM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) closed by
- wontfix: Since it is a bad idea to repeat the query I think the core should not …
- 9:02 AM Ticket #1258 (New export format for bioassay set spot data) updated by
-
Summary changed
Mar 18, 2009:
- 3:42 PM Changeset [4821] by
- References #1238: Check performance of BioAssaySetExporter Need …
- 3:42 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- (In [4821]) References #1238: Check performance of BioAssaySetExporter …
- 2:18 PM Changeset [4820] by
- References #1238: Check performance of BioAssaySetExporter Fixes a …
- 2:18 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- (In [4820]) References #1238: Check performance of BioAssaySetExporter …
- 2:10 PM Changeset [4819] by
- References #1248: Long running job may cause a timeout on session on …
- 2:10 PM Ticket #1248 (Long running job may cause a timeout on session on internal job queue) updated by
- (In [4819]) References #1248: Long running job may cause a timeout on …
- 12:39 PM Ticket #903 (Experiment Explorer is slow) updated by
- So, a decision needs to be made. Should we have an index on the …
Mar 17, 2009:
- 3:41 PM Ticket #903 (Experiment Explorer is slow) updated by
- Results from 'grey' # = Number of assays R = No index I = With index …
- 11:44 AM Ticket #1244 (Incorrect documentation in MenuItemAction) closed by
- fixed: (In [4818]) Fixes #1244: Incorrect documentation in MenuItemAction
- 11:44 AM Changeset [4818] by
- Fixes #1244: Incorrect documentation in MenuItemAction
- 10:53 AM Ticket #1251 (Improvements of the 'performance' test program) closed by
- fixed
- 10:53 AM Ticket #1238 (Check performance of BioAssaySetExporter) closed by
- fixed
- 9:07 AM Changeset [4817] by
- References #903: Experiment Explorer is slow Testing the idea of …
- 9:07 AM Ticket #903 (Experiment Explorer is slow) updated by
- (In [4817]) References #903: Experiment Explorer is slow Testing the …
Mar 16, 2009:
- 3:15 PM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by
- (In [4816]) References #1240 The item-overview tree is now using lazy …
- 3:15 PM Changeset [4816] by
- References #1240 The item-overview tree is now using lazy loading. The …
- 2:57 PM Ticket #903 (Experiment Explorer is slow) updated by
- I have no measured times on this by it feels a bit better. I would say …
- 2:41 PM Changeset [4815] by
- References #903: Experiment Explorer is slow Testing the idea of …
- 2:41 PM Ticket #903 (Experiment Explorer is slow) updated by
- (In [4815]) References #903: Experiment Explorer is slow Testing the …
- 2:01 PM Ticket #903 (Experiment Explorer is slow) updated by
- Regarding the first reporter/position caching query, I think there are …
- 1:40 PM Ticket #903 (Experiment Explorer is slow) updated by
- I'll continue by checking the two remaining queries. The first query …
- 11:28 AM Ticket #1257 (Use multiple threads in Lowess) updated by
- The debugging on 'grey' showed that the initial statement that the …
- 11:11 AM Ticket #1258 (New export format for bioassay set spot data) updated by
- Replying to jari: > I suppose the BASEfile can do the …
- 9:39 AM Ticket #1257 (Use multiple threads in Lowess) closed by
- fixed: (In [4814]) Fixes #1257: Use multiple threads in Lowess Removed debug …
- 9:39 AM Changeset [4814] by
- Fixes #1257: Use multiple threads in Lowess Removed debug output.
- 9:29 AM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) updated by
- The user can't know that.
- 9:27 AM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) updated by
- Replying to nicklas: > No it not possible for the exporter …
- 9:24 AM Ticket #1257 (Use multiple threads in Lowess) updated by
- (In [4813]) References #1257: Use multiple threads in Lowess Now uses …
- 9:24 AM Changeset [4813] by
- References #1257: Use multiple threads in Lowess Now uses …
- 9:09 AM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) closed by
- wontfix: No it not possible for the exporter to have this information. It …
- 8:59 AM Ticket #1258 (New export format for bioassay set spot data) updated by
-
Component changed
I suppose the BASEfile can do the trick, however there is the header … - 8:57 AM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) created by
- How do I as a user know which bioassay 1, 2, 3 and so on corresponds …
Mar 13, 2009:
- 5:40 PM Ticket #1258 (New export format for bioassay set spot data) updated by
- Do you mean the export that is done by the Table exporter plug-in? If …
- 3:55 PM Ticket #1258 (New export format for bioassay set spot data) created by
- It would be nice to be able to export bioassay set spot data without …
- 3:05 PM Changeset [4812] by
- References #1257: Use multiple threads in Lowess Trying a different …
- 3:05 PM Ticket #1257 (Use multiple threads in Lowess) updated by
- (In [4812]) References #1257: Use multiple threads in Lowess Trying a …
- 3:04 PM Ticket #1257 (Use multiple threads in Lowess) updated by
- Timings for Lowess on 'grey' when using two worker threads: […] …
- 2:00 PM Changeset [4811] by
- References #1257: Use multiple threads in Lowess Checking in a …
- 2:00 PM Ticket #1257 (Use multiple threads in Lowess) updated by
- (In [4811]) References #1257: Use multiple threads in Lowess Checking …
- 1:57 PM Ticket #1257 (Use multiple threads in Lowess) updated by
- Here are the original timings for the Lowess plug-in on 'grey'. For …
- 12:47 PM Ticket #1257 (Use multiple threads in Lowess) updated by
-
Status, Owner changed
- 12:44 PM Changeset [4810] by
- References #1238: Check performance of BioAssaySetExporter Cleaning …
- 12:44 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- (In [4810]) References #1238: Check performance of BioAssaySetExporter …
- 11:37 AM Changeset [4809] by
- References #903: Experiment Explorer is slow Sort positions in …
- 11:37 AM Ticket #903 (Experiment Explorer is slow) updated by
- (In [4809]) References #903: Experiment Explorer is slow Sort …
- 11:09 AM Changeset [4808] by
- References #903: Experiment Explorer is slow Increased the cache to …
- 11:09 AM Ticket #903 (Experiment Explorer is slow) updated by
- (In [4808]) References #903: Experiment Explorer is slow Increased …
- 8:21 AM Ticket #1257 (Use multiple threads in Lowess) created by
- The Lowess plug-in is spending most if it's time doing calculations, …
Mar 12, 2009:
- 2:16 PM Ticket #903 (Experiment Explorer is slow) updated by
-
Owner, Status changed
- 11:34 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- The first test results from 'grey' have finally arrived. The results …
- 11:13 AM Changeset [4807] by
- References #1238: Check performance of BioAssaySetExporter This "fix" …
- 11:13 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- (In [4807]) References #1238: Check performance of BioAssaySetExporter …
- 8:22 AM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by
-
Owner, Status changed
Mar 11, 2009:
- 2:15 PM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) updated by
- > Would we schedule the re-factoring to the next (2.11) milestone or …
- 1:54 PM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) updated by
- Replying to nicklas: > My recommendation is to avoid …
- 1:40 PM Ticket #903 (Experiment Explorer is slow) updated by
- I have identified five different queries that are used in the …
- 1:12 PM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) updated by
- My recommendation is to avoid queries that are not absolutely …
- 12:24 PM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) created by
- ... I think. My problem is that I export a plain matrix, make …
- 8:43 AM Specifications/Test_procedures edited by
- Linking to new performance test document (diff)
- 8:40 AM Specifications/Test_procedures/Roles edited by
- (diff)
- 8:09 AM Ticket #1255 (Make annotation importer handle units) updated by
-
Type changed
Mar 10, 2009:
- 6:06 PM Ticket #1255 (Make annotation importer handle units) created by
- The annotation importer should be able to handle units, refs …
- 6:02 PM Ticket #1254 (How about change of file type for list of files?) created by
- Add support to change file type for files selected in the file viewer, …
- 5:56 PM Ticket #978 (Unzipped files never inherit file type specified during upload) reopened by
- Reopening this ticket and adding to the BASE 3.0 milestone for …
- 5:36 PM Ticket #1222 (Document the nice batch import of raw data through experiment import button) updated by
-
Description changed
- 5:34 PM Ticket #1253 (plainMatrixExport documentation needs to be clarified) created by
- The documentation says that reporters and assays are ordered in …
- 3:02 PM Ticket #1251 (Improvements of the 'performance' test program) updated by
- (In [4806]) References #1251: Improvements of the 'performance' test …
- 3:02 PM Changeset [4806] by
- References #1251: Improvements of the 'performance' test program 1-4 …
- 2:49 PM Ticket #1252 (Core export plug-ins section; bioassay set exports) created by
- We should add information on what file formats can be exported ... …
- 9:30 AM Ticket #1251 (Improvements of the 'performance' test program) updated by
-
Description changed
- 9:26 AM Ticket #1251 (Improvements of the 'performance' test program) updated by
-
Description changed
- 9:19 AM Ticket #1251 (Improvements of the 'performance' test program) updated by
-
Description changed
- 9:18 AM Ticket #1251 (Improvements of the 'performance' test program) updated by
- (In [4805]) References #1251: Improvements of the 'performance' test …
- 9:18 AM Changeset [4805] by
- References #1251: Improvements of the 'performance' test program …
- 9:09 AM Ticket #1251 (Improvements of the 'performance' test program) updated by
-
Status, Owner changed
- 9:09 AM Ticket #1251 (Improvements of the 'performance' test program) created by
- I will gather a few enhancements to the 'performance' test program …
- 9:05 AM Changeset [4804] by
- Fixes #1250: The internal job queue start jobs that has been marked as …
- 9:05 AM Ticket #1250 (The internal job queue start jobs that has been marked as "removed") closed by
- fixed: (In [4804]) Fixes #1250: The internal job queue start jobs that has …
- 8:49 AM Ticket #1250 (The internal job queue start jobs that has been marked as "removed") updated by
-
Status, Owner changed
Mar 9, 2009:
- 1:49 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- > Try to re-write the export to get reporter information in a separate …
- 1:41 PM Features edited by
- (diff)
- 11:28 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- > Try to re-write the serial export to only use a single query. This …
- 9:01 AM Ticket #1232 (Long running getAllInheritedAnnotations query) updated by
-
Status, Owner changed
Mar 6, 2009:
- 3:37 PM Changeset [4803] by
- References #1238: Check performance of BioAssaySetExporter Added test …
- 3:37 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- (In [4803]) References #1238: Check performance of BioAssaySetExporter …
- 2:54 PM Ticket #1250 (The internal job queue start jobs that has been marked as "removed") created by
- 1. Do anything that ends up in registration of a job, for example, an …
- 1:34 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
- I have now added the initial measurements which are made with a BASE …
- 10:44 AM Ticket #1249 (Error message explanation subsection in FAQ part of the manual) created by
- We should probably add a section explaining some error messages in the …
- 9:16 AM Changeset [4802] by
- Fixes #1247: BioAssaySetExporter doesn't update progress when …
- 9:16 AM Ticket #1247 (BioAssaySetExporter doesn't update progress when exporting to BASEFile ...) closed by
- fixed: (In [4802]) Fixes #1247: BioAssaySetExporter doesn't update progress …
Mar 5, 2009:
- 1:26 PM Changeset [4801] by
- Fixes #1248: Long running job may cause a timeout on session on …
- 1:26 PM Ticket #1248 (Long running job may cause a timeout on session on internal job queue) closed by
- fixed: (In [4801]) Fixes #1248: Long running job may cause a timeout on …
- 12:44 PM Ticket #1246 (Annotation importer refuses to skip bad lines) closed by
- fixed: (In [4800]) Fixes #1246 Annotation importer refuses to skip bad lines. …
- 12:44 PM Changeset [4800] by
- Fixes #1246 Annotation importer refuses to skip bad lines. …
- 12:34 PM Changeset [4799] by
- Removed unused import
- 8:55 AM Ticket #1247 (BioAssaySetExporter doesn't update progress when exporting to BASEFile ...) updated by
-
Owner, Status changed
- 8:54 AM Ticket #1248 (Long running job may cause a timeout on session on internal job queue) updated by
-
Owner, Status changed
- 8:54 AM Ticket #1248 (Long running job may cause a timeout on session on internal job queue) created by
- It seems like if a job doesn't do anything for some time that triggers …
Mar 4, 2009:
- 1:07 PM Ticket #1247 (BioAssaySetExporter doesn't update progress when exporting to BASEFile ...) created by
- The progress stands at 0% until the export has finished. If exporting …
Mar 3, 2009:
- 1:29 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by
-
Status changed
- 1:29 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by
-
Status, Owner changed
Tested Mylyn plugin for Eclipse but everything wasn't included in the … - 1:25 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by
-
Description, Type changed
- 1:24 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by
-
Description, Status, Type changed
- 9:37 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
-
Status, Owner changed
- 9:25 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by
-
Description changed
Initial tests seems to indicate that the main factor is the number of … - 8:45 AM Ticket #1241 (Implement "lazy loading" of the directory tree) closed by
- fixed: (In [4798]) Fixes #1241: Implement "lazy loading" of the directory …
- 8:45 AM Ticket #1242 (Generate <img> tag for spot images with a class attribute) reopened by
- Oopss.. the previous commit should have gone to #1241.
- 8:43 AM Changeset [4798] by
- Fixes #1242: Implement "lazy loading" of the directory tree Forgot …
- 8:43 AM Ticket #1242 (Generate <img> tag for spot images with a class attribute) closed by
- fixed: (In [4798]) Fixes #1242: Implement "lazy loading" of the directory …
- 8:42 AM Changeset [4797] by
- Fixes #1245: Add support for lazy loading of nodes in JoustTree Made …
- 8:42 AM Ticket #1245 (Add support for lazy loading of nodes in JoustTree) closed by
- fixed: (In [4797]) Fixes #1245: Add support for lazy loading of nodes in …
Mar 2, 2009:
- 7:58 PM Changeset [4796] by
- References #1241: Implement "lazy loading" of the directory tree We …
- 7:58 PM Ticket #1241 (Implement "lazy loading" of the directory tree) updated by
- (In [4796]) References #1241: Implement "lazy loading" of the …
- 7:56 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by
- The error handling code is there, but it seems that it has not been …
- 2:33 PM Ticket #1246 (Annotation importer refuses to skip bad lines) created by
- I have a file (attached) that refuses to import. All lines with valid …
- 11:34 AM Changeset [4795] by
- References #1245: Add support for lazy loading of nodes in JoustTree …
- 11:34 AM Tickets #1245,1241 batch updated by
- (In [4795]) References #1245: Add support for lazy loading of nodes in …
- 11:33 AM Ticket #1241 (Implement "lazy loading" of the directory tree) updated by
-
Owner, Status changed
- 11:32 AM Changeset [4794] by
- References #1241: Implement "lazy loading" of the directory tree I …
- 11:32 AM Ticket #1241 (Implement "lazy loading" of the directory tree) updated by
- (In [4794]) References #1241: Implement "lazy loading" of the …
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