Timeline
Dec 8, 2008:
- 9:29 PM Changeset [4691] by
- Fixes #1208.
- 9:29 PM Ticket #1208 (BioAssaySetExporter produces malformed data for plainMatrix format) closed by
- fixed: (In [4691]) Fixes #1208.
- 9:28 PM Ticket #1208 (BioAssaySetExporter produces malformed data for plainMatrix format) created by
- For non-complete data in a bioassayset the resulting file rows has …
- 7:49 PM Ticket #1207 (Using empty filters (= or <>) on an annotation column with units ...) created by
- 1. Create an annotation type for any kind of item. Select any unit and …
- 7:43 PM Ticket #1206 (= and <> operators have been switched when used on annotations and ...) created by
- 1. Create an annotation type for any kind of item 2. Create two items …
- 7:39 PM Ticket #1205 (Serious problem filtering on annotations where one whishes to exlude a ...) closed by
- invalid: This has nothing to with if you are searching on annotations or not. …
- 3:55 PM Ticket #1205 (Serious problem filtering on annotations where one whishes to exlude a ...) created by
- The problem is that when I use a filter like <>string then all items …
- 2:53 PM Ticket #1204 (Unknown column 'pos.reporter_id' in 'field list' when using 'merge on ...) created by
- 1. From any experiment with data, select a bioassay set and then the …
- 1:27 PM Changeset [4690] by
- Fixes #1184: Default project sharing level should be setable
- 1:27 PM Ticket #1184 (Default project sharing level should be setable) closed by
- fixed: (In [4690]) Fixes #1184: Default project sharing level should be setable
- 9:53 AM Changeset [4689] by
- References #1184: Default project sharing level should be setable …
Dec 5, 2008:
- 2:51 PM Ticket #1203 (Improve error handling in plug-in auto-installation wizard) closed by
- fixed: (In [4688]) Fixes #1203: Improve error handling in plug-in …
- 2:51 PM Changeset [4688] by
- Fixes #1203: Improve error handling in plug-in auto-installation wizard
- 1:15 PM Ticket #1202 (PluginDefinition.loadPluginInformation throws strange error message if ...) closed by
- fixed: (In [4687]) Fixes #1202: PluginDefinition?.loadPluginInformation throws …
- 1:15 PM Changeset [4687] by
- Fixes #1202: PluginDefinition?.loadPluginInformation throws strange …
- 11:30 AM Changeset [4686] by
- Fixes #1194: A missing raw data type breaks experiment and raw …
- 11:30 AM Ticket #1194 (A missing raw data type breaks experiment and raw bioassay views) closed by
- fixed: (In [4686]) Fixes #1194: A missing raw data type breaks experiment and …
Dec 4, 2008:
- 4:34 PM Changeset [4685] by
- References #979 Added some more comments for javadoc and finished the test.
- 2:26 PM Changeset [4684] by
- Fixes #1201: JAR path fields are not visible or editable for data file …
- 2:26 PM Ticket #1201 (JAR path fields are not visible or editable for data file types) closed by
- fixed: (In [4684]) Fixes #1201: JAR path fields are not visible or editable …
- 1:30 PM Ticket #1199 (NullPointerException when using "Table exporter" to export annotations) closed by
- fixed: (In [4683]) Fixes #1199: NullPointerException? when using "Table …
- 1:29 PM Changeset [4683] by
- Fixes #1199: NullPointerException? when using "Table exporter" to …
- 9:53 AM Changeset [4682] by
- References #1175: Biomaterial lists Added role key for biomaterial lists
- 9:29 AM Ticket #1203 (Improve error handling in plug-in auto-installation wizard) created by
- Error information while installing one or more plug-ins with the …
- 9:24 AM Ticket #1202 (PluginDefinition.loadPluginInformation throws strange error message if ...) created by
- This is typically child item that takes the permissions from a parent …
Dec 3, 2008:
- 2:04 PM Changeset [4681] by
- References #1175: Biomaterial lists Basic web interface is now in place.
- 1:40 PM Ticket #1201 (JAR path fields are not visible or editable for data file types) created by
- A data file type may have a validator and/or meta data reader that are …
- 1:29 PM Ticket #1200 (Biomaterial LIMS as a top-level menu item) created by
- The menu under "View" is growing large since all new items seems to …
Dec 2, 2008:
- 4:21 PM Changeset [4680] by
- Correcting typo.
- 1:42 PM Ticket #1199 (NullPointerException when using "Table exporter" to export annotations) created by
- Here is the stacktrace: […] This happens when all of the following …
- 9:37 AM Changeset [4679] by
- References #1175: Biomaterial lists Core and data layer implemented.
- 9:08 AM Changeset [4678] by
- References #979 Removed compling error in test-class
Dec 1, 2008:
- 11:36 AM Changeset [4677] by
- References #979 Updated schema_version, implemented the last methods …
Nov 28, 2008:
- 1:38 PM Changeset [4676] by
- References #1196: BASE is trying to set a cookie when editing an …
- 1:35 PM Changeset [4675] by
- Fixes #1196: BASE is trying to set a cookie when editing an …
- 1:35 PM Ticket #1196 (BASE is trying to set a cookie when editing an annotations) closed by
- fixed: (In [4675]) Fixes #1196: BASE is trying to set a cookie when editing …
- 1:01 PM Changeset [4674] by
- Fixes #1172: Make it visually clear when a filter is active.
- 1:01 PM Ticket #1172 (Make it visually clear when a filter is active.) closed by
- fixed: (In [4674]) Fixes #1172: Make it visually clear when a filter is active.
- 12:52 PM Ticket #1198 (Error: The query has already been executed (Illumina detection P-value ...) closed by
- invalid: Plese report this error on the BASE plugins site: …
- 12:51 PM Ticket #1197 (Plugin running time unexpected output while executing) closed by
- invalid: This is a server configuration issue. Eg. The job agent has a …
- 12:47 PM Ticket #1198 (Error: The query has already been executed (Illumina detection P-value ...) created by
- When trying to run plugin 'Illumina detection P-value calculation' I …
- 12:11 PM Ticket #1197 (Plugin running time unexpected output while executing) created by
- When running a plugin (Illumina package) the running time reads +6h …
- 11:16 AM Changeset [4673] by
- Fixes #1186: Column display size should not become too large in …
- 11:16 AM Ticket #1186 (Column display size should not become too large in listings) closed by
- fixed: (In [4673]) Fixes #1186: Column display size should not become too …
Nov 27, 2008:
- 10:29 PM Ticket #1196 (BASE is trying to set a cookie when editing an annotations) created by
- 1. Create a new item that supports annotations, for example a …
- 4:39 PM Changeset [4672] by
- References #979 Missed some files in the last commit.
- 4:33 PM Changeset [4671] by
- References #979 Added keyword to svn-properties
- 4:24 PM Changeset [4670] by
- References #979 Added data- and item classes needed by BioMaterial? …
- 4:23 PM Ticket #1195 (Problem when importing negative values for annotations with float as ...) created by
- I tried to annotate a number of my extracts using the annotation …
- 3:58 PM Ticket #1194 (A missing raw data type breaks experiment and raw bioassay views) created by
- Sorting and Filtering in the Experiments List View is not working at …
Nov 26, 2008:
- 12:06 PM Milestone BASE 2.9 completed
- 12:05 PM Changeset [4669] by
- Merged 2.9-stable@4643:4666 to trunk.
- 11:45 AM DownloadPage edited by
- Releasing 2.9.0 (diff)
- 11:30 AM Changeset [4668] by
- Changes for future release 2.9.1
- 11:14 AM Changeset [4667] by
- Tagging version 2.9
- 11:13 AM Changeset [4666] by
- Preparing release 2.9
Nov 25, 2008:
- 11:42 AM Changeset [4665] by
- Updated current BASE team.
Nov 24, 2008:
- 2:49 PM Changeset [4664] by
- Stylesheet is now included in doc/historical/ when running ant dist.
- 2:13 PM Historical edited by
- Changed links to historical documents (diff)
- 11:39 AM Changeset [4663] by
- References #1175: Biomaterial lists Added BioMaterialList? to UML diagram
- 9:25 AM Ticket #1151 (Create a batch-importer version of the 'roles' test procedure) closed by
- fixed: The file has been added to the test-data repository.
- 9:17 AM Ticket #1193 (Generic tree-like item overview) created by
- Implement a function that is similar to the "Experiment overview" that …
- 9:03 AM Ticket #1192 (Use biomaterial lists as filters) created by
- This depends on #1175. On any given list page with biomaterials …
- 8:59 AM Ticket #1191 (Biomaterial lists manager API and interface) created by
- This depends on #1175. Add support for merging and manipulating …
- 8:56 AM Ticket #1190 (API and interface for creating biomaterial lists) created by
- This depends on #1175. In the web interface it should be possible to …
- 8:34 AM Changeset [4662] by
- Fixes #1181: No navigation path to enclosing directory on single file …
- 8:34 AM Ticket #1181 (No navigation path to enclosing directory on single file view page) closed by
- fixed: (In [4662]) Fixes #1181: No navigation path to enclosing directory on …
Nov 21, 2008:
- 8:37 PM Ticket #1151 (Create a batch-importer version of the 'roles' test procedure) reopened by
- The 'rawbioassay_out.txt' file is missing in the repository. Running …
- 2:33 PM Changeset [4661] by
- Fixes #1183: Filtering on file size does not accept units Also fixed …
- 2:33 PM Ticket #1183 (Filtering on file size does not accept units) closed by
- fixed: (In [4661]) Fixes #1183: Filtering on file size does not accept units …
- 1:02 PM Changeset [4660] by
- Fixes #1189: Can't import annotation to raw bioassays
- 1:02 PM Ticket #1189 (Can't import annotation to raw bioassays) closed by
- fixed: (In [4660]) Fixes #1189: Can't import annotation to raw bioassays
- 12:58 PM Ticket #1189 (Can't import annotation to raw bioassays) created by
- Start a job configuration with the Annotation importer on the 'Raw …
- 10:31 AM Ticket #1160 (MeV export: Base1 style column headers should be changed to BASE 2 style) closed by
- fixed: (In [4659]) Fixes #1160.
- 10:31 AM Changeset [4659] by
- Fixes #1160.
- 10:25 AM Ticket #1188 (Create a super batch importer?) created by
- With the new really nice batch importers available a natural idea …
- 10:19 AM Ticket #1187 (Can batch importers be made smart enough to import data to several ...) created by
- The use case we would like to support is that the laboratory staff …
- 10:05 AM Ticket #1186 (Column display size should not become too large in listings) created by
- In many cases the table listings are hampered by too much information …
- 9:47 AM Changeset [4658] by
- References #979: Biomaterial LIMS Added BioLIMS to UML diagram.
- 9:21 AM Ticket #1185 (Manual transform creator) created by
- Normally all transforms are created by plug-ins in BASE. However, many …
- 9:16 AM Ticket #1184 (Default project sharing level should be setable) created by
- Currently the sharing level is set but the setting used in the …
- 9:13 AM Ticket #1183 (Filtering on file size does not accept units) created by
- It would be nice to be able to filter on file size using units like kB …
- 9:06 AM Ticket #727 (Add presentations and publications to the wiki) closed by
- wontfix
- 9:04 AM Changeset [4657] by
- Fixing typo.
Nov 20, 2008:
- 1:36 PM Changeset [4656] by
- References #792: Add support for units to annotation values Test …
- 1:15 PM Changeset [4655] by
- References #1145 and #1151. Added instructions in the documentation …
- 1:13 PM Changeset [4654] by
- References #1145: Make the generic raw data importer support batch …
- 12:42 PM Changeset [4653] by
- References #1145: Make the generic raw data importer support batch …
- 12:05 PM Changeset [4652] by
- References #1133: Experimental factors - inherit annotations Changed …
- 11:59 AM Changeset [4651] by
- References #1133: Experimental factors - inherit annotations Closing …
Nov 19, 2008:
- 11:13 PM Ticket #1182 (Groups with hidden members) created by
- Two different types of group in BASe would be useful. Actually there …
- 4:27 PM Changeset [4650] by
- References #792: Add support for units to annotation values Fixed …
- 2:46 PM Changeset [4649] by
- Fixes #1112: Create new items with project default properties from …
- 2:46 PM Ticket #1112 (Create new items with project default properties from active project) closed by
- fixed: (In [4649]) Fixes #1112: Create new items with project default …
- 12:17 PM Ticket #1181 (No navigation path to enclosing directory on single file view page) created by
- I don't think this is related to ticket #1178 ... Example: from a raw …
- 12:10 PM Ticket #1112 (Create new items with project default properties from active project) reopened by
- There is a serious bug in the fix for this that causes all users to …
- 9:48 AM Ticket #1180 (Quota usage viewing should be possible for standard users) created by
- Currently a user cannot see a detail view of their disk usage. The …
- 9:41 AM Ticket #1179 (A user should be able to see which groups he is a part of without any ...) created by
Nov 18, 2008:
- 2:51 PM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) closed by
- fixed: Tested on backup of demo-database. * Database size: 600+600 MB. * …
- 12:41 PM Changeset [4648] by
- References #1092: Add listing of child items that are the same type as …
- 11:35 AM Changeset [4647] by
- Adding 'nice' to test scripts to keep the computer usable while they …
- 10:53 AM Changeset [4646] by
- References #1112: Create new items with project default properties …
- 9:58 AM Changeset [4645] by
- References #1169: Create a function that changes an existing BASE …
- 8:47 AM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) closed by
- duplicate: Replaced by #1178.
- 8:47 AM Ticket #1178 (Access a directory through file manager when not all parent ...) created by
- See #982 for background. The file manager loads the directory tree …
- 8:21 AM Changeset [4644] by
- Changes for future release 2.10
- 8:19 AM Changeset [4643] by
- Forking new minor version 2.9 branch
Nov 17, 2008:
- 4:21 PM Changeset [4642] by
- Fixes #1176 Version number should be included in title
- 4:21 PM Ticket #1176 (Version number should be included in title) closed by
- fixed: (In [4642]) Fixes #1176 Version number should be included in title
- 4:20 PM Ticket #1177 (Building pdf documentation fails) closed by
- fixed: Fixed in [4641]
- 4:16 PM Changeset [4641] by
- Fixing #1177 Building pdf documentation fails
- 2:48 PM Changeset [4640] by
- References #1151: Create a batch-importer version of the 'roles' test …
- 2:46 PM Changeset [4639] by
- References #1149: Mark related items for removal when "parent" item is …
- 2:24 PM Ticket #1177 (Building pdf documentation fails) created by
- Last part of the output: […] This is probably a side-effect of …
- 1:57 PM Ticket #1176 (Version number should be included in title) created by
- The documentation title should include which base-version the text is …
- 1:53 PM Ticket #1175 (Biomaterial lists) created by
- It should be possible to group biomaterials into lists (similar to …
- 1:44 PM Milestone BASE 2.8.5 completed
- 2.8.4 was the last 2.8-related release.
- 1:42 PM Ticket #966 (Registered and possibly last updated – add to all/most items) closed by
- duplicate: #1166 implements the 'creation date' part and #108 is for the rest.
- 1:39 PM Ticket #1174 (Show creation date for items in web interface) created by
- #1166 added support for storing dates to the core. We need to modify …
- 1:32 PM Ticket #1173 (Make it visually clear when no project is active) created by
- Currently, it is possible to see which project that is active in the …
- 1:27 PM Ticket #1172 (Make it visually clear when a filter is active.) created by
- The current implementation of the various lists in the web interface …
- 1:22 PM Ticket #1171 (Add BioLIMS support to batch importers) created by
- The batch importers that works with biomaterial items …
- 1:02 PM Changeset [4638] by
- Fixes #1170: Move old update warnings to an appendix
- 1:02 PM Ticket #1170 (Move old update warnings to an appendix) closed by
- fixed: (In [4638]) Fixes #1170: Move old update warnings to an appendix
- 11:38 AM Changeset [4637] by
- Fixes #1168: Require UTF-8 to be used as database character set
- 11:38 AM Ticket #1168 (Require UTF-8 to be used as database character set) closed by
- fixed: (In [4637]) Fixes #1168: Require UTF-8 to be used as database character set
- 11:29 AM Ticket #1170 (Move old update warnings to an appendix) created by
- The update documentation starts with lots of warnings with important …
- 9:35 AM Changeset [4636] by
- References #1169: Create a function that changes an existing BASE …
Nov 12, 2008:
- 12:19 PM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) created by
- See #1168 for background info. The script provided with the BASE …
- 11:45 AM Ticket #1168 (Require UTF-8 to be used as database character set) created by
- A side effect of #792 is that we must be able to store non-latin1 …
Nov 11, 2008:
- 12:08 PM Changeset [4635] by
- References #792: Add support for units to annotation values Use the …
- 7:51 AM Changeset [4634] by
- References #792: Add support for units to annotation values Use the …
Nov 10, 2008:
- 4:35 PM Changeset [4633] by
- Fixes #1151 User role-test can now test batch importers. Documentation …
- 4:35 PM Ticket #1151 (Create a batch-importer version of the 'roles' test procedure) closed by
- fixed: (In [4633]) Fixes #1151 User role-test can now test batch importers. …
Note: See TracTimeline
for information about the timeline view.
