Timeline



Nov 28, 2008:

2:05 PM Ticket #1198 (Error: The query has already been executed (Illumina detection P-value ...) updated by Nicklas Nordborg
http://baseplugins.thep.lu.se/ticket/149
1:38 PM Changeset [4676] by Nicklas Nordborg
References #1196: BASE is trying to set a cookie when editing an …
1:38 PM Ticket #1196 (BASE is trying to set a cookie when editing an annotations) updated by Nicklas Nordborg
(In [4676]) References #1196: BASE is trying to set a cookie when …
1:38 PM Ticket #1198 (Error: The query has already been executed (Illumina detection P-value ...) updated by Johan Vallon-Christersson
Have added all this as ticket on the BASE plugins site: …
1:37 PM Ticket #1198 (Error: The query has already been executed (Illumina detection P-value ...) updated by Johan Vallon-Christersson
net.sf.basedb.core.BaseException: The query has already been executed. …
1:35 PM Changeset [4675] by Nicklas Nordborg
Fixes #1196: BASE is trying to set a cookie when editing an …
1:35 PM Ticket #1196 (BASE is trying to set a cookie when editing an annotations) closed by Nicklas Nordborg
fixed: (In [4675]) Fixes #1196: BASE is trying to set a cookie when editing …
1:01 PM Changeset [4674] by Nicklas Nordborg
Fixes #1172: Make it visually clear when a filter is active.
1:01 PM Ticket #1172 (Make it visually clear when a filter is active.) closed by Nicklas Nordborg
fixed: (In [4674]) Fixes #1172: Make it visually clear when a filter is active.
12:55 PM Ticket #1198 (Error: The query has already been executed (Illumina detection P-value ...) updated by Nicklas Nordborg
And when you do, please copy the complete text from the "Stack trace" …
12:52 PM Ticket #1198 (Error: The query has already been executed (Illumina detection P-value ...) closed by Nicklas Nordborg
invalid: Plese report this error on the BASE plugins site: …
12:51 PM Ticket #1197 (Plugin running time unexpected output while executing) closed by Nicklas Nordborg
invalid: This is a server configuration issue. Eg. The job agent has a …
12:47 PM Picture 8.png attached to Ticket #1198 by Johan Vallon-Christersson
12:47 PM Ticket #1198 (Error: The query has already been executed (Illumina detection P-value ...) created by Johan Vallon-Christersson
When trying to run plugin 'Illumina detection P-value calculation' I …
12:15 PM Ticket #1197 (Plugin running time unexpected output while executing) updated by Johan Vallon-Christersson
Replying to johan: > When running a plugin (Illumina …
12:13 PM Picture 6.png attached to Ticket #1197 by Johan Vallon-Christersson
12:11 PM Ticket #1197 (Plugin running time unexpected output while executing) created by Johan Vallon-Christersson
When running a plugin (Illumina package) the running time reads +6h …
11:39 AM Ticket #1172 (Make it visually clear when a filter is active.) updated by Nicklas Nordborg
Owner, Status changed
11:16 AM Changeset [4673] by Nicklas Nordborg
Fixes #1186: Column display size should not become too large in …
11:16 AM Ticket #1186 (Column display size should not become too large in listings) closed by Nicklas Nordborg
fixed: (In [4673]) Fixes #1186: Column display size should not become too …

Nov 27, 2008:

10:32 PM Ticket #1196 (BASE is trying to set a cookie when editing an annotations) updated by Nicklas Nordborg
Description changed
10:29 PM Ticket #1196 (BASE is trying to set a cookie when editing an annotations) created by Nicklas Nordborg
1. Create a new item that supports annotations, for example a …
7:43 PM Ticket #1195 (Problem when importing negative values for annotations with float as ...) updated by Nicklas Nordborg
It works when I try it. Have you set the correct decimal separator? …
7:26 PM Ticket #1194 (A missing raw data type breaks experiment and raw bioassay views) updated by Nicklas Nordborg
Works fine when I try it. Can you check the log file for error messages?
4:39 PM Changeset [4672] by Martin Svensson
References #979 Missed some files in the last commit.
4:39 PM Ticket #979 (Biomaterial LIMS) updated by Martin Svensson
(In [4672]) References #979 Missed some files in the last commit.
4:33 PM Ticket #979 (Biomaterial LIMS) updated by Martin Svensson
(In [4671]) References #979 Added keyword to svn-properties
4:33 PM Changeset [4671] by Martin Svensson
References #979 Added keyword to svn-properties
4:24 PM Changeset [4670] by Martin Svensson
References #979 Added data- and item classes needed by BioMaterial
4:24 PM Ticket #979 (Biomaterial LIMS) updated by Martin Svensson
(In [4670]) References #979 Added data- and item classes needed by …
4:23 PM Ticket #1195 (Problem when importing negative values for annotations with float as ...) created by base
I tried to annotate a number of my extracts using the annotation …
4:05 PM Ticket #1194 (A missing raw data type breaks experiment and raw bioassay views) updated by base
P.S.: I also just noticed that I cannot delete items from the …
3:58 PM Ticket #1194 (A missing raw data type breaks experiment and raw bioassay views) created by base
Sorting and Filtering in the Experiments List View is not working at …

Nov 26, 2008:

12:06 PM Milestone BASE 2.9 completed
12:05 PM Changeset [4669] by Nicklas Nordborg
Merged 2.9-stable@4643:4666 to trunk.
11:45 AM DownloadPage edited by Nicklas Nordborg
Releasing 2.9.0 (diff)
11:30 AM Changeset [4668] by Nicklas Nordborg
Changes for future release 2.9.1
11:14 AM Changeset [4667] by Nicklas Nordborg
Tagging version 2.9
11:13 AM Changeset [4666] by Nicklas Nordborg
Preparing release 2.9
9:29 AM Ticket #979 (Biomaterial LIMS) updated by Jari Häkkinen
Description changed
9:26 AM Ticket #1175 (Biomaterial lists) updated by Jari Häkkinen
Description changed

Nov 25, 2008:

12:51 PM Ticket #979 (Biomaterial LIMS) updated by Martin Svensson
Status, Owner changed
11:42 AM Changeset [4665] by Jari Häkkinen
Updated current BASE team.
10:01 AM Ticket #1186 (Column display size should not become too large in listings) updated by Nicklas Nordborg
Priority, Owner, Milestone, Status changed
I have some more tests with a CSS/Javascript solution since I think …

Nov 24, 2008:

2:49 PM Changeset [4664] by Martin Svensson
Stylesheet is now included in doc/historical/ when running ant dist.
2:13 PM Historical edited by Martin Svensson
Changed links to historical documents (diff)
11:40 AM Ticket #1175 (Biomaterial lists) updated by Nicklas Nordborg
Description changed
11:39 AM Changeset [4663] by Nicklas Nordborg
References #1175: Biomaterial lists Added BioMaterialList to UML diagram
11:39 AM Ticket #1175 (Biomaterial lists) updated by Nicklas Nordborg
(In [4663]) References #1175: Biomaterial lists Added BioMaterialList
9:25 AM Ticket #1151 (Create a batch-importer version of the 'roles' test procedure) closed by Martin Svensson
fixed: The file has been added to the test-data repository.
9:17 AM Ticket #1193 (Generic tree-like item overview) created by Nicklas Nordborg
Implement a function that is similar to the "Experiment overview" that …
9:05 AM Ticket #1192 (Use biomaterial lists as filters) updated by Nicklas Nordborg
Description changed
9:04 AM Ticket #1191 (Biomaterial lists manager API and interface) updated by Nicklas Nordborg
Description changed
9:04 AM Ticket #1175 (Biomaterial lists) updated by Nicklas Nordborg
Description changed
9:03 AM Ticket #1192 (Use biomaterial lists as filters) created by Nicklas Nordborg
This depends on #1175. On any given list page with biomaterials …
8:59 AM Ticket #1191 (Biomaterial lists manager API and interface) created by Nicklas Nordborg
This depends on #1175. Add support for merging and manipulating …
8:56 AM Ticket #1190 (API and interface for creating biomaterial lists) created by Nicklas Nordborg
This depends on #1175. In the web interface it should be possible to …
8:34 AM Changeset [4662] by Nicklas Nordborg
Fixes #1181: No navigation path to enclosing directory on single file …
8:34 AM Ticket #1181 (No navigation path to enclosing directory on single file view page) closed by Nicklas Nordborg
fixed: (In [4662]) Fixes #1181: No navigation path to enclosing directory on …
8:33 AM Ticket #1181 (No navigation path to enclosing directory on single file view page) updated by Nicklas Nordborg
Owner, Status, Milestone changed

Nov 21, 2008:

8:37 PM Ticket #1151 (Create a batch-importer version of the 'roles' test procedure) reopened by Nicklas Nordborg
The 'rawbioassay_out.txt' file is missing in the repository. Running …
2:33 PM Changeset [4661] by Nicklas Nordborg
Fixes #1183: Filtering on file size does not accept units Also fixed …
2:33 PM Ticket #1183 (Filtering on file size does not accept units) closed by Nicklas Nordborg
fixed: (In [4661]) Fixes #1183: Filtering on file size does not accept units …
1:35 PM Ticket #1186 (Column display size should not become too large in listings) updated by Nicklas Nordborg
I made some tests with this some time ago. It is rather easy to …
1:20 PM Ticket #1178 (Access a directory through file manager when not all parent ...) updated by Martin Svensson
Summary changed
1:20 PM Ticket #1184 (Default project sharing level should be setable) updated by Nicklas Nordborg
Milestone, Component changed
It should be possible to add this as a property on the project. It …
1:13 PM Ticket #1180 (Quota usage viewing should be possible for standard users) updated by Nicklas Nordborg
Milestone, Priority changed
It should be possible to link from the overview information on 'Home' …
1:10 PM Ticket #1183 (Filtering on file size does not accept units) updated by Nicklas Nordborg
Summary, Priority, Status, Milestone, Owner changed
File sizes was never added as a units, but it should not be hard to …
1:02 PM Changeset [4660] by Nicklas Nordborg
Fixes #1189: Can't import annotation to raw bioassays
1:02 PM Ticket #1189 (Can't import annotation to raw bioassays) closed by Nicklas Nordborg
fixed: (In [4660]) Fixes #1189: Can't import annotation to raw bioassays
12:58 PM Ticket #1189 (Can't import annotation to raw bioassays) updated by Nicklas Nordborg
Status, Owner changed
12:58 PM Ticket #1189 (Can't import annotation to raw bioassays) created by Nicklas Nordborg
Start a job configuration with the Annotation importer on the 'Raw …
11:45 AM Ticket #522 (Write "Why use BASE" section) updated by Jari Häkkinen
Milestone changed
10:31 AM Ticket #1160 (MeV export: Base1 style column headers should be changed to BASE 2 style) closed by Jari Häkkinen
fixed: (In [4659]) Fixes #1160.
10:31 AM Changeset [4659] by Jari Häkkinen
Fixes #1160.
10:25 AM Ticket #1188 (Create a super batch importer?) created by Jari Häkkinen
With the new really nice batch importers available a natural idea …
10:19 AM Ticket #1187 (Can batch importers be made smart enough to import data to several ...) created by Jari Häkkinen
The use case we would like to support is that the laboratory staff …
10:05 AM Ticket #1186 (Column display size should not become too large in listings) created by Jari Häkkinen
In many cases the table listings are hampered by too much information …
9:51 AM Ticket #979 (Biomaterial LIMS) updated by Nicklas Nordborg
Description, Summary changed
9:47 AM Changeset [4658] by Nicklas Nordborg
References #979: Biomaterial LIMS Added BioLIMS to UML diagram.
9:47 AM Ticket #979 (Biomaterial LIMS) updated by Nicklas Nordborg
(In [4658]) References #979: Biomaterial LIMS Added BioLIMS to UML …
9:21 AM Ticket #1185 (Manual transform creator) created by Jari Häkkinen
Normally all transforms are created by plug-ins in BASE. However, many …
9:16 AM Ticket #1184 (Default project sharing level should be setable) created by Jari Häkkinen
Currently the sharing level is set but the setting used in the …
9:13 AM Ticket #1183 (Filtering on file size does not accept units) created by Jari Häkkinen
It would be nice to be able to filter on file size using units like kB …
9:06 AM Ticket #727 (Add presentations and publications to the wiki) closed by Jari Häkkinen
wontfix
9:04 AM Changeset [4657] by Jari Häkkinen
Fixing typo.

Nov 20, 2008:

1:36 PM Changeset [4656] by Nicklas Nordborg
References #792: Add support for units to annotation values Test …
1:36 PM Ticket #792 (Add support for units to annotation values) updated by Nicklas Nordborg
(In [4656]) References #792: Add support for units to annotation …
1:15 PM Changeset [4655] by Nicklas Nordborg
References #1145 and #1151. Added instructions in the documentation …
1:15 PM Tickets #1145,​1151 batch updated by Nicklas Nordborg
(In [4655]) References #1145 and #1151. Added instructions in the …
1:13 PM Changeset [4654] by Nicklas Nordborg
References #1145: Make the generic raw data importer support batch …
1:13 PM Ticket #1145 (Make the generic raw data importer support batch import) updated by Nicklas Nordborg
(In [4654]) References #1145: Make the generic raw data importer …
12:42 PM Changeset [4653] by Nicklas Nordborg
References #1145: Make the generic raw data importer support batch …
12:42 PM Ticket #1145 (Make the generic raw data importer support batch import) updated by Nicklas Nordborg
(In [4653]) References #1145: Make the generic raw data importer …
12:05 PM Changeset [4652] by Nicklas Nordborg
References #1133: Experimental factors - inherit annotations Changed …
12:05 PM Ticket #1133 (Experimental factors - inherit annotations) updated by Nicklas Nordborg
(In [4652]) References #1133: Experimental factors - inherit …
11:59 AM Ticket #1133 (Experimental factors - inherit annotations) updated by Nicklas Nordborg
(In [4651]) References #1133: Experimental factors - inherit …
11:59 AM Changeset [4651] by Nicklas Nordborg
References #1133: Experimental factors - inherit annotations Closing …
8:22 AM Ticket #1182 (Groups with hidden members) updated by Nicklas Nordborg
Milestone changed
The EVERYONE groups is very special indeed, because no user is …

Nov 19, 2008:

11:13 PM Ticket #1182 (Groups with hidden members) created by Jari Häkkinen
Two different types of group in BASe would be useful. Actually there …
10:49 PM Ticket #1180 (Quota usage viewing should be possible for standard users) updated by Jari Häkkinen
Yes but ... Of course the permission allows the user to accomplish …
4:36 PM Ticket #1181 (No navigation path to enclosing directory on single file view page) updated by Nicklas Nordborg
No, this is not the same as #1178. Yes, I think the fix is easy. …
4:27 PM Changeset [4650] by Nicklas Nordborg
References #792: Add support for units to annotation values Fixed …
4:27 PM Ticket #792 (Add support for units to annotation values) updated by Nicklas Nordborg
(In [4650]) References #792: Add support for units to annotation …
2:46 PM Changeset [4649] by Nicklas Nordborg
Fixes #1112: Create new items with project default properties from …
2:46 PM Ticket #1112 (Create new items with project default properties from active project) closed by Nicklas Nordborg
fixed: (In [4649]) Fixes #1112: Create new items with project default …
1:04 PM Ticket #1171 (Add BioLIMS support to batch importers) updated by Johan Vallon-Christersson
Description changed
12:24 PM Ticket #1179 (A user should be able to see which groups he is a part of without any ...) updated by Nicklas Nordborg
> It is also be possible for any user to go to Administrate -> …
12:17 PM Ticket #1181 (No navigation path to enclosing directory on single file view page) created by base
I don't think this is related to ticket #1178 ... Example: from a raw …
12:10 PM Ticket #1112 (Create new items with project default properties from active project) updated by Nicklas Nordborg
Status changed
12:10 PM Ticket #1112 (Create new items with project default properties from active project) updated by Nicklas Nordborg
Status changed
12:10 PM Ticket #1112 (Create new items with project default properties from active project) reopened by Nicklas Nordborg
There is a serious bug in the fix for this that causes all users to …
11:27 AM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) updated by Jari Häkkinen
Replying to nicklas: > A possible workaround if things …
11:27 AM Ticket #1179 (A user should be able to see which groups he is a part of without any ...) updated by Nicklas Nordborg
It is also be possible for any user to go to Administrate -> User, …
11:22 AM Ticket #1179 (A user should be able to see which groups he is a part of without any ...) updated by Jari Häkkinen
Summary changed
11:22 AM Ticket #1180 (Quota usage viewing should be possible for standard users) updated by Nicklas Nordborg
The permission you are looking for is "Disk usage". This is the 10th …
11:18 AM Ticket #1179 (A user should be able to see which groups he is a part of without any ...) updated by Nicklas Nordborg
A workaround is to create a project or an item that it is possible to …
9:48 AM Ticket #1180 (Quota usage viewing should be possible for standard users) created by Jari Häkkinen
Currently a user cannot see a detail view of their disk usage. The …
9:41 AM Ticket #1179 (A user should be able to see which groups he is a part of without any ...) created by Jari Häkkinen

Nov 18, 2008:

6:54 PM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) updated by Nicklas Nordborg
A possible workaround if things have been done in the wrong order is …
6:04 PM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) updated by Nicklas Nordborg
The utf8 fix must be executed against a 2.8 database BEFORE …
4:41 PM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) updated by Jari Häkkinen
Replying to nicklas: > (In [4636]) References #1169: …
2:51 PM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) closed by Nicklas Nordborg
fixed: Tested on backup of demo-database. * Database size: 600+600 MB. * …
12:41 PM Ticket #1092 (Add listing of child items that are the same type as the parent) updated by Nicklas Nordborg
(In [4648]) References #1092: Add listing of child items that are the …
12:41 PM Changeset [4648] by Nicklas Nordborg
References #1092: Add listing of child items that are the same type as …
11:35 AM Changeset [4647] by Nicklas Nordborg
Adding 'nice' to test scripts to keep the computer usable while they …
10:53 AM Changeset [4646] by Nicklas Nordborg
References #1112: Create new items with project default properties …
10:53 AM Ticket #1112 (Create new items with project default properties from active project) updated by Nicklas Nordborg
(In [4646]) References #1112: Create new items with project default …
9:58 AM Changeset [4645] by Nicklas Nordborg
References #1169: Create a function that changes an existing BASE …
9:58 AM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) updated by Nicklas Nordborg
(In [4645]) References #1169: Create a function that changes an …
8:47 AM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) closed by Nicklas Nordborg
duplicate: Replaced by #1178.
8:47 AM Ticket #1178 (Access a directory through file manager when not all parent ...) created by Nicklas Nordborg
See #982 for background. The file manager loads the directory tree …
8:21 AM Changeset [4644] by Nicklas Nordborg
Changes for future release 2.10
8:19 AM Changeset [4643] by Nicklas Nordborg
Forking new minor version 2.9 branch

Nov 17, 2008:

4:21 PM Changeset [4642] by Martin Svensson
Fixes #1176 Version number should be included in title
4:21 PM Ticket #1176 (Version number should be included in title) closed by Martin Svensson
fixed: (In [4642]) Fixes #1176 Version number should be included in title
4:20 PM Ticket #1177 (Building pdf documentation fails) closed by Martin Svensson
fixed: Fixed in [4641]
4:16 PM Changeset [4641] by Martin Svensson
Fixing #1177 Building pdf documentation fails
3:42 PM Ticket #1177 (Building pdf documentation fails) updated by Martin Svensson
Status, Owner changed
3:41 PM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) updated by Nicklas Nordborg
Milestone changed
It is a limitation in the web client. It loads directories top-down …
3:35 PM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) updated by Jari Häkkinen
Replying to nicklas: > Are all directories on the path …
2:48 PM Ticket #1151 (Create a batch-importer version of the 'roles' test procedure) updated by Nicklas Nordborg
(In [4640]) References #1151: Create a batch-importer version of the …
2:48 PM Changeset [4640] by Nicklas Nordborg
References #1151: Create a batch-importer version of the 'roles' test …
2:46 PM Changeset [4639] by Nicklas Nordborg
References #1149: Mark related items for removal when "parent" item is …
2:46 PM Ticket #1149 (Mark related items for removal when "parent" item is marked for removal) updated by Nicklas Nordborg
(In [4639]) References #1149: Mark related items for removal when …
2:25 PM Ticket #1176 (Version number should be included in title) updated by Martin Svensson
Status changed
2:24 PM Ticket #1177 (Building pdf documentation fails) created by Nicklas Nordborg
Last part of the output: […] This is probably a side-effect of …
1:57 PM Ticket #1176 (Version number should be included in title) created by Martin Svensson
The documentation title should include which base-version the text is …
1:53 PM Ticket #1175 (Biomaterial lists) created by Nicklas Nordborg
It should be possible to group biomaterials into lists (similar to …
1:44 PM Milestone BASE 2.8.5 completed
2.8.4 was the last 2.8-related release.
1:42 PM Ticket #966 (Registered and possibly last updated – add to all/most items) closed by Nicklas Nordborg
duplicate: #1166 implements the 'creation date' part and #108 is for the rest.
1:40 PM Ticket #1166 (Store creation date for items) updated by Nicklas Nordborg
Description changed
1:39 PM Ticket #1174 (Show creation date for items in web interface) created by Nicklas Nordborg
#1166 added support for storing dates to the core. We need to modify …
1:37 PM Ticket #1166 (Store creation date for items) updated by Nicklas Nordborg
Summary, Milestone changed
1:32 PM Ticket #1173 (Make it visually clear when no project is active) created by Nicklas Nordborg
Currently, it is possible to see which project that is active in the …
1:27 PM Ticket #1172 (Make it visually clear when a filter is active.) created by Nicklas Nordborg
The current implementation of the various lists in the web interface …
1:22 PM Ticket #1171 (Add BioLIMS support to batch importers) created by Nicklas Nordborg
The batch importers that works with biomaterial items …
1:18 PM Ticket #979 (Biomaterial LIMS) updated by Nicklas Nordborg
Description, Milestone changed
1:08 PM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) updated by Nicklas Nordborg
Are all directories on the path shared to UserB? The directory tree …
1:02 PM Changeset [4638] by Nicklas Nordborg
Fixes #1170: Move old update warnings to an appendix
1:02 PM Ticket #1170 (Move old update warnings to an appendix) closed by Nicklas Nordborg
fixed: (In [4638]) Fixes #1170: Move old update warnings to an appendix
11:38 AM Changeset [4637] by Nicklas Nordborg
Fixes #1168: Require UTF-8 to be used as database character set
11:38 AM Ticket #1168 (Require UTF-8 to be used as database character set) closed by Nicklas Nordborg
fixed: (In [4637]) Fixes #1168: Require UTF-8 to be used as database character set
11:29 AM Ticket #1170 (Move old update warnings to an appendix) created by Nicklas Nordborg
The update documentation starts with lots of warnings with important …
9:35 AM Changeset [4636] by Nicklas Nordborg
References #1169: Create a function that changes an existing BASE …
9:35 AM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) updated by Nicklas Nordborg
(In [4636]) References #1169: Create a function that changes an …

Nov 14, 2008:

4:47 PM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) updated by Johan Vallon-Christersson
Milestone changed
4:47 PM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) updated by Johan Vallon-Christersson
Owner changed
4:45 PM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) updated by Johan Vallon-Christersson
Replying to johan: Have tested in 2.8.4 without …

Nov 12, 2008:

12:53 PM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) updated by Nicklas Nordborg
Owner, Status changed
12:53 PM Ticket #1168 (Require UTF-8 to be used as database character set) updated by Nicklas Nordborg
Description, Status, Owner changed
12:19 PM Ticket #1169 (Create a function that changes an existing BASE database to use UTF-8) created by Nicklas Nordborg
See #1168 for background info. The script provided with the BASE …
11:45 AM Ticket #1168 (Require UTF-8 to be used as database character set) created by Nicklas Nordborg
A side effect of #792 is that we must be able to store non-latin1 …

Nov 11, 2008:

12:08 PM Changeset [4635] by Nicklas Nordborg
References #792: Add support for units to annotation values Use the …
12:08 PM Ticket #792 (Add support for units to annotation values) updated by Nicklas Nordborg
(In [4635]) References #792: Add support for units to annotation …
7:51 AM Changeset [4634] by Nicklas Nordborg
References #792: Add support for units to annotation values Use the …
7:51 AM Ticket #792 (Add support for units to annotation values) updated by Nicklas Nordborg
(In [4634]) References #792: Add support for units to annotation …

Nov 10, 2008:

4:35 PM Changeset [4633] by Martin Svensson
Fixes #1151 User role-test can now test batch importers. Documentation …
4:35 PM Ticket #1151 (Create a batch-importer version of the 'roles' test procedure) closed by Martin Svensson
fixed: (In [4633]) Fixes #1151 User role-test can now test batch importers. …

Nov 7, 2008:

2:46 PM Changeset [4632] by Nicklas Nordborg
References #792: Add support for units to annotation values Fixes a …
2:46 PM Ticket #792 (Add support for units to annotation values) updated by Nicklas Nordborg
(In [4632]) References #792: Add support for units to annotation …
12:06 PM Ticket #1167 (Base1PluginExecutor should handle reporter-id=0 as null in some cases) closed by Nicklas Nordborg
fixed: (In [4631]) Fixes #1167: Base1PluginExecutor should handle …
12:06 PM Changeset [4631] by Nicklas Nordborg
Fixes #1167: Base1PluginExecutor should handle reporter-id=0 as null …
11:15 AM Ticket #1167 (Base1PluginExecutor should handle reporter-id=0 as null in some cases) updated by Nicklas Nordborg
Owner, Status changed
11:15 AM Ticket #1167 (Base1PluginExecutor should handle reporter-id=0 as null in some cases) created by Nicklas Nordborg
There is a problem with some BASE1 plug-ins when a bioassay set has …
9:38 AM Ticket #792 (Add support for units to annotation values) closed by Nicklas Nordborg
fixed: Seems to be working ok.
9:36 AM Ticket #1133 (Experimental factors - inherit annotations) updated by Nicklas Nordborg
Priority, Component, Milestone changed
9:36 AM Changeset [4630] by Nicklas Nordborg
Fixes #1133: Experimental factors - inherit annotations
9:36 AM Ticket #1133 (Experimental factors - inherit annotations) closed by Nicklas Nordborg
fixed: (In [4630]) Fixes #1133: Experimental factors - inherit annotations

Nov 6, 2008:

12:56 PM Ticket #1133 (Experimental factors - inherit annotations) updated by Nicklas Nordborg
Duplicates needs to be manually removed.
12:56 PM Ticket #1133 (Experimental factors - inherit annotations) updated by Nicklas Nordborg
Owner, Status changed
I'll have a go at this. I am thinking of something like a "Auto …
9:26 AM Ticket #1162 (Raw bioassay importer fails with InvalidUseOfNullException when raw ...) updated by Nicklas Nordborg
(In [4629]) References #1162: Raw bioassay importer fails with …
9:26 AM Changeset [4629] by Nicklas Nordborg
References #1162: Raw bioassay importer fails with …

Nov 5, 2008:

4:43 PM Changeset [4628] by Martin Svensson
References #1151 Refactored to better use the existing code in the …
4:43 PM Ticket #1151 (Create a batch-importer version of the 'roles' test procedure) updated by Martin Svensson
(In [4628]) References #1151 Refactored to better use the existing …
12:06 PM Ticket #1154 (Add a 'Plug-in package' item for grouping plug-ins) closed by Nicklas Nordborg
wontfix: Well.... this is maybe not so useful after all. It is simple to just …
12:03 PM Ticket #1139 (Display the barcode for array slide in the hybridization information page) updated by Nicklas Nordborg
Milestone changed
12:02 PM Ticket #1139 (Display the barcode for array slide in the hybridization information page) closed by Nicklas Nordborg
fixed: (In [4627]) Fixes #1139: Display the barcode for array slide in the …
12:02 PM Changeset [4627] by Nicklas Nordborg
Fixes #1139: Display the barcode for array slide in the hybridization …
10:56 AM Changeset [4626] by Nicklas Nordborg
Fixes #1164: Reporter importer plug-in displays 'Reporter ID' when …
10:56 AM Ticket #1164 (Reporter importer plug-in displays 'Reporter ID' when setting column ...) closed by Nicklas Nordborg
fixed: (In [4626]) Fixes #1164: Reporter importer plug-in displays 'Reporter …

Nov 4, 2008:

4:45 PM Changeset [4625] by Martin Svensson
References #1151 Created new classes which do the power user-role test …
4:45 PM Ticket #1151 (Create a batch-importer version of the 'roles' test procedure) updated by Martin Svensson
(In [4625]) References #1151 Created new classes which do the power …
2:59 PM Ticket #1164 (Reporter importer plug-in displays 'Reporter ID' when setting column ...) updated by Nicklas Nordborg
Owner, Status changed
2:56 PM Changeset [4624] by Nicklas Nordborg
Fixes #1155: Automatic plug-in registration wizard should group …
2:56 PM Ticket #1155 (Automatic plug-in registration wizard should group plug-ins by JAR file) closed by Nicklas Nordborg
fixed: (In [4624]) Fixes #1155: Automatic plug-in registration wizard should …
11:29 AM Ticket #966 (Registered and possibly last updated – add to all/most items) updated by Johan Vallon-Christersson
List of items that would benefit from having registered as a property …
11:26 AM Ticket #1166 (Store creation date for items) created by Johan Vallon-Christersson
Replaces ticket:966 This ticket is about support in the core …
11:19 AM Ticket #1165 (Option to insert Block number when importing reporter map with Meta ...) updated by Nicklas Nordborg
I came to think about that it is not a good idea to set the block …
11:14 AM Ticket #1165 (Option to insert Block number when importing reporter map with Meta ...) updated by Jari Häkkinen
Replying to nicklas: > This can be done in the …
10:45 AM Ticket #1164 (Reporter importer plug-in displays 'Reporter ID' when setting column ...) updated by Nicklas Nordborg
Milestone, Priority changed
This is on line 131 in ReporterFlatFileImporter: …
10:41 AM Ticket #1165 (Option to insert Block number when importing reporter map with Meta ...) closed by Nicklas Nordborg
worksforme: This can be done in the configuration settings. Just enter the desired …
10:34 AM Ticket #1165 (Option to insert Block number when importing reporter map with Meta ...) created by Johan Vallon-Christersson
When using plugin: Reporter map importer. I have a reporter map with …
10:15 AM Ticket #1164 (Reporter importer plug-in displays 'Reporter ID' when setting column ...) created by Jari Häkkinen
In reporter listings there is no 'Reporter ID' column and it takes …

Nov 3, 2008:

11:27 AM Ticket #1155 (Automatic plug-in registration wizard should group plug-ins by JAR file) updated by Nicklas Nordborg
Status, Owner, Milestone changed
9:32 AM Changeset [4623] by Nicklas Nordborg
Fixes #1163: Set name of child bioassay when there is only one parent
9:32 AM Ticket #1163 (Set name of child bioassay when there is only one parent) closed by Nicklas Nordborg
fixed: (In [4623]) Fixes #1163: Set name of child bioassay when there is only …
9:22 AM Ticket #1163 (Set name of child bioassay when there is only one parent) updated by Nicklas Nordborg
Status, Owner changed
9:22 AM Ticket #1163 (Set name of child bioassay when there is only one parent) created by Nicklas Nordborg
Currently, the BioAssaySet.newBioAssay(BioAssay) copies the name of …

Oct 31, 2008:

11:00 AM Changeset [4622] by Nicklas Nordborg
Fixes #1162: Raw bioassay importer fails with …
11:00 AM Ticket #1162 (Raw bioassay importer fails with InvalidUseOfNullException when raw ...) closed by Nicklas Nordborg
fixed: (In [4622]) Fixes #1162: Raw bioassay importer fails with …
10:58 AM Ticket #1162 (Raw bioassay importer fails with InvalidUseOfNullException when raw ...) updated by Nicklas Nordborg
Status, Owner changed
10:57 AM Ticket #1162 (Raw bioassay importer fails with InvalidUseOfNullException when raw ...) created by Nicklas Nordborg
The error message should be an ItemNotFoundException instead so users …
10:51 AM Changeset [4621] by Nicklas Nordborg
Fixes #1158: Improving plugin autodetection
10:51 AM Ticket #1158 (Improving plugin autodetection) closed by Nicklas Nordborg
fixed: (In [4621]) Fixes #1158: Improving plugin autodetection
10:47 AM Ticket #1158 (Improving plugin autodetection) updated by Nicklas Nordborg
Status, Milestone, Owner changed
In other words... * If there is only one configuration for a …
9:54 AM Ticket #394 (Make it possible to export and properly query values in components) updated by Nicklas Nordborg
Milestone changed
9:54 AM Ticket #394 (Make it possible to export and properly query values in components) closed by Nicklas Nordborg
fixed: (In [4620]) Fixes #394: Make it possible to export and properly query …
9:54 AM Changeset [4620] by Nicklas Nordborg
Fixes #394: Make it possible to export and properly query values in …
Note: See TracTimeline for information about the timeline view.