Timeline



Jun 25, 2008:

3:42 PM Ticket #1065 (Can't display spot-data columns that are based on formulas returning ...) updated by Nicklas Nordborg
Description changed
3:42 PM Ticket #1067 (Can't display spot-data columns that are based on formulas returning ...) created by Nicklas Nordborg
This is the same problem as in ticket #1065. I have been investigating …
1:02 PM Ticket #1065 (Can't display spot-data columns that are based on formulas returning ...) updated by Nicklas Nordborg
I have now checked MySQL also and the result is different from …
12:47 PM Ticket #1066 (Reset all filters functionality request) updated by Nicklas Nordborg
I think we can have two levels: * Reset in-memory settings * Reset …
12:28 PM Ticket #1066 (Reset all filters functionality request) created by Jari Häkkinen
In some cases filtering of list views and inclusion of columns to list …
12:13 PM Ticket #1065 (Can't display spot-data columns that are based on formulas returning ...) updated by Nicklas Nordborg
I made a quick check and the result is that the return type is varying …
11:50 AM Ticket #1065 (Can't display spot-data columns that are based on formulas returning ...) updated by Nicklas Nordborg
Priority, Milestone, Component, Summary changed
It seems like the chromosome column in question comes from a formula …
10:54 AM Ticket #1065 (Can't display spot-data columns that are based on formulas returning ...) created by Jari Häkkinen
See also #1067. I was looking at spot data and with a few columns …
9:57 AM Ticket #1064 (Add support for dry-run to the plug-in system) created by Nicklas Nordborg
There is a wish in ticket #1028 that it should be possible to run a …

Jun 24, 2008:

3:01 PM Ticket #1063 (Read doc/src/docbook/overviewdoc/features.xml) updated by Jari Häkkinen
Summary changed
3:00 PM Changeset [4350] by Jari Häkkinen
Fixes #1062.
3:00 PM Ticket #1062 (Add information about Illumina plugin to platform section in doc) closed by Jari Häkkinen
fixed: (In [4350]) Fixes #1062.

Jun 23, 2008:

10:35 PM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
Description changed
Major revision of the user perspective, and the sample openoffice is …
10:33 PM batchimport_userperspective-3.txt attached to Ticket #1028 by Jari Häkkinen
9:32 PM Ticket #1063 (Read doc/src/docbook/overviewdoc/features.xml) created by Jari Häkkinen
Was: Add information about supported microarray platforms to web site …
9:28 PM Ticket #1062 (Add information about Illumina plugin to platform section in doc) updated by Jari Häkkinen
Status changed
9:28 PM Ticket #1062 (Add information about Illumina plugin to platform section in doc) created by Jari Häkkinen
2:43 PM Ticket #1037 (Add 'id' column to all list pages) updated by Nicklas Nordborg
(In [4349]) References #1037: Add 'id' column to all list pages Fixed …
2:43 PM Changeset [4349] by Nicklas Nordborg
References #1037: Add 'id' column to all list pages Fixed incorrect …
8:07 AM Ticket #1060 (Bug? - Overview plots fail after BASE 2.7.1 update) closed by Nicklas Nordborg
invalid: I don't think this has anything to do with the 2.7.1 update. It is …
7:56 AM Ticket #1061 (Error: Run plugin: Formula intensity calculator) closed by Nicklas Nordborg
invalid: You need to give the base2@myserver.edu user access to the dynamic …

Jun 19, 2008:

11:37 PM Ticket #1061 (Error: Run plugin: Formula intensity calculator) created by base
When attempting to run this plugin, I get this MySQL error: CREATE …
4:34 PM Ticket #1060 (Bug? - Overview plots fail after BASE 2.7.1 update) created by Johan Vallon-Christersson
After updating to BASE 2.7.1 (Lund onk installation) overview plots …
10:46 AM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
Description changed
Updated spreadsheet, sample information to the labeled extracts step …
8:29 AM Ticket #1059 (JasperException: Unable to find setter method for attribute: direction ...) updated by Nicklas Nordborg
Version, Summary, Priority changed
I have checked with IBM's java runtime (version 6) and I get the same …

Jun 18, 2008:

8:31 PM Ticket #1059 (JasperException: Unable to find setter method for attribute: direction ...) updated by base
Yes, that fixed the problem! Thanks a lot.
7:30 PM Ticket #1059 (JasperException: Unable to find setter method for attribute: direction ...) updated by Nicklas Nordborg
Have you tried using Sun's Java runtime?
6:18 PM Ticket #1059 (JasperException: Unable to find setter method for attribute: direction ...) updated by base
Replying to nicklas: > I think this is a Tomcat-related …
2:43 PM Changeset [4348] by Nicklas Nordborg
References #1038: Provide manual parameter for 'spotsize' in GAL …
2:43 PM Ticket #1038 (Provide manual parameter for 'spotsize' in GAL exporter) updated by Nicklas Nordborg
(In [4348]) References #1038: Provide manual parameter for 'spotsize' …
2:19 PM Changeset [4347] by Nicklas Nordborg
Merged patch release 2.7.1 to the trunk
2:06 PM Milestone BASE 2.7.1 completed
Bug fixes for 2.7. Revision log: log:branches/2.7-stable@4296:4345
2:06 PM DownloadPage edited by Nicklas Nordborg
Releasing 2.7.1 (diff)
2:02 PM Changeset [4346] by Nicklas Nordborg
Changes for future release 2.7.2
1:52 PM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
Description changed
batchimport_userperspective.txt updated.
1:51 PM batchimport_userperspective-2.txt attached to Ticket #1028 by Jari Häkkinen
1:49 PM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
Description changed
1:48 PM Changeset [4345] by Nicklas Nordborg
Tagging version 2.7.1
1:47 PM Changeset [4344] by Nicklas Nordborg
Preparing release 2.7.1
1:46 PM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
I added a spreadsheet with sample sheets for use with the batch item …
1:42 PM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
In the batchimport.txt document there is a discussion on multi-item …
8:48 AM Ticket #1059 (JasperException: Unable to find setter method for attribute: direction ...) updated by Nicklas Nordborg
I think this is a Tomcat-related problem. Which Tomcat5 version are …

Jun 17, 2008:

11:36 PM Ticket #1059 (JasperException: Unable to find setter method for attribute: direction ...) created by base
I'm attempting to use BASE 2.6.3. I only have Tomcat5 available, and …
2:54 PM Ticket #1010 (Display progress reporter for plug-ins that are executing with the ...) updated by Martin Svensson
(In [4343]) References #1010
2:54 PM Changeset [4343] by Martin Svensson
References #1010
2:53 PM Changeset [4342] by Martin Svensson
Fixes #1010
2:53 PM Ticket #1010 (Display progress reporter for plug-ins that are executing with the ...) closed by Martin Svensson
fixed: (In [4342]) Fixes #1010
2:06 PM Ticket #1056 (Disk usage does not seem to report disk usage properly for experiments) closed by Nicklas Nordborg
fixed: (In [4341]) Fixes #1056: Disk usage does not seem to report disk usage …
2:06 PM Changeset [4341] by Nicklas Nordborg
Fixes #1056: Disk usage does not seem to report disk usage properly …
1:44 PM Ticket #1056 (Disk usage does not seem to report disk usage properly for experiments) updated by Nicklas Nordborg
Milestone, Status, Owner, Component changed
I can confirm this. There seems to be an issue with synchronizing the …
1:14 PM Changeset [4340] by Nicklas Nordborg
Fixes #1054: Make it possible for the annotation importer to identify …
1:14 PM Ticket #1054 (Make it possible for the annotation importer to identify items by ...) closed by Nicklas Nordborg
fixed: (In [4340]) Fixes #1054: Make it possible for the annotation importer …
1:12 PM Ticket #1010 (Display progress reporter for plug-ins that are executing with the ...) reopened by Martin Svensson
The progress reporter does not finish, instead it hangs even if the …
1:02 PM Ticket #1058 (Metadata.getPropertyValue() fails to get value for the 'id' property) closed by Nicklas Nordborg
fixed: (In [4339]) Fixes #1058: Metadata.getPropertyValue() fails to get …
1:02 PM Changeset [4339] by Nicklas Nordborg
Fixes #1058: Metadata.getPropertyValue() fails to get value for the …
1:02 PM Ticket #1058 (Metadata.getPropertyValue() fails to get value for the 'id' property) created by Nicklas Nordborg
This makes it impossible to export the id value from data tables …
11:21 AM Ticket #1054 (Make it possible for the annotation importer to identify items by ...) updated by Nicklas Nordborg
Status, Owner changed
11:20 AM Ticket #1050 (Add core support for storing analysed data in files instead of in the ...) closed by Nicklas Nordborg
fixed: Seems to be working ok.
11:19 AM Ticket #1051 (Add support in the GUI for accssing files used to store analysed data) closed by Nicklas Nordborg
fixed: (In [4338]) Fixes #1051: Add support in the GUI for accssing files …
11:19 AM Changeset [4338] by Nicklas Nordborg
Fixes #1051: Add support in the GUI for accssing files used to store …
11:07 AM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
Description changed
11:02 AM batchimport_userperspective.txt attached to Ticket #1028 by Jari Häkkinen
First draft of a users view
11:01 AM Changeset [4337] by Nicklas Nordborg
Fixes #1052: Core analysis plug-ins need to be aware of bioassaysets …
11:01 AM Ticket #1052 (Core analysis plug-ins need to be aware of bioassaysets that use data ...) closed by Nicklas Nordborg
fixed: (In [4337]) Fixes #1052: Core analysis plug-ins need to be aware of …
11:01 AM Ticket #1057 (Make it possible to access and change web service options on client side) updated by Martin Svensson
Owner changed
10:05 AM Ticket #1055 (Messaging system) updated by Jari Häkkinen
Description changed
9:54 AM Ticket #1052 (Core analysis plug-ins need to be aware of bioassaysets that use data ...) updated by Nicklas Nordborg
Description changed
9:51 AM Ticket #1049 (Add the 'quadratic mean' to available Avg. method's for formulas.) closed by Martin Svensson
fixed: (In [4336]) Fixes #1049 Add the 'quadratic mean' to available Avg. …
9:51 AM Changeset [4336] by Martin Svensson
Fixes #1049 Add the 'quadratic mean' to available Avg. method's for …
9:29 AM Ticket #1052 (Core analysis plug-ins need to be aware of bioassaysets that use data ...) updated by Nicklas Nordborg
Status, Owner changed
9:26 AM Changeset [4335] by Nicklas Nordborg
References #1050: Add core support for storing analysed data in files …
9:26 AM Ticket #1050 (Add core support for storing analysed data in files instead of in the ...) updated by Nicklas Nordborg
(In [4335]) References #1050: Add core support for storing analysed …
8:03 AM Ticket #1051 (Add support in the GUI for accssing files used to store analysed data) updated by Nicklas Nordborg
Owner, Status changed
8:01 AM Changeset [4334] by Nicklas Nordborg
References #1050: Add core support for storing analysed data in files …
8:01 AM Ticket #1050 (Add core support for storing analysed data in files instead of in the ...) updated by Nicklas Nordborg
(In [4334]) References #1050: Add core support for storing analysed …

Jun 16, 2008:

8:10 PM Ticket #1057 (Make it possible to access and change web service options on client side) updated by Nicklas Nordborg
Summary changed
8:09 PM Ticket #1057 (Make it possible to access and change web service options on client side) created by Nicklas Nordborg
The current implementation of the client-side of the web services …
11:05 AM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
I have added a version 2 of the specification doc. There are a couple …
11:03 AM batchimport-2.txt attached to Ticket #1028 by Jari Häkkinen
9:49 AM Ticket #1037 (Add 'id' column to all list pages) closed by Martin Svensson
fixed: (In [4333]) Fixes #1037 Add 'id' column to all list pages
9:49 AM Changeset [4333] by Martin Svensson
Fixes #1037 Add 'id' column to all list pages
9:14 AM Ticket #1050 (Add core support for storing analysed data in files instead of in the ...) updated by Nicklas Nordborg
Status, Owner changed

Jun 12, 2008:

1:06 PM Ticket #1049 (Add the 'quadratic mean' to available Avg. method's for formulas.) updated by Martin Svensson
Owner, Status changed
11:22 AM Changeset [4332] by Martin Svensson
References #1037 Most of the list pages can now show an item's ID.
11:22 AM Ticket #1037 (Add 'id' column to all list pages) updated by Martin Svensson
(In [4332]) References #1037 Most of the list pages can now show an …

Jun 11, 2008:

5:16 PM Ticket #1056 (Disk usage does not seem to report disk usage properly for experiments) created by Johan Vallon-Christersson
Defect? Experiments in BASE2 with lots of bioassaysets (and …
2:47 PM Ticket #1055 (Messaging system) created by Jari Häkkinen
The messaging system should allow users with proper credential to send …
9:12 AM Changeset [4331] by Martin Svensson
References #1037 The most important list pages are done.
9:12 AM Ticket #1037 (Add 'id' column to all list pages) updated by Martin Svensson
(In [4331]) References #1037 The most important list pages are done.

Jun 10, 2008:

4:15 PM Ticket #1037 (Add 'id' column to all list pages) updated by Martin Svensson
Owner, Status changed
3:59 PM Ticket #1010 (Display progress reporter for plug-ins that are executing with the ...) closed by Martin Svensson
fixed: (In [4330]) Fixes #1010 Display progress reporter for plug-ins that …
3:59 PM Changeset [4330] by Martin Svensson
Fixes #1010 Display progress reporter for plug-ins that are executing …

Jun 6, 2008:

11:56 AM Ticket #1048 (Plugin configuration wizard display/parse incorrectly (when ...) updated by Johan Vallon-Christersson
Good. Thanks.

Jun 5, 2008:

2:45 PM Ticket #1054 (Make it possible for the annotation importer to identify items by ...) created by Nicklas Nordborg
The current implementation only supports 'name' or 'externalId' as …
2:36 PM batchimport.txt attached to Ticket #1028 by Nicklas Nordborg
First draft of a developers view
8:12 AM Ticket #1048 (Plugin configuration wizard display/parse incorrectly (when ...) closed by Nicklas Nordborg
wontfix: I have found what you are talking about. The issue here is that when …
8:01 AM Changeset [4329] by Nicklas Nordborg
Fixes #1047: Type.BOOLEAN.parseString() doesn't convert strings as expected
8:01 AM Ticket #1047 (Type.BOOLEAN.parseString() doesn't convert strings as expected) closed by Nicklas Nordborg
fixed: (In [4329]) Fixes #1047: Type.BOOLEAN.parseString() doesn't convert …
7:59 AM Ticket #1047 (Type.BOOLEAN.parseString() doesn't convert strings as expected) updated by Nicklas Nordborg
Summary changed
I have to change the list again. 'null' shouldn't be converted to …
7:58 AM Changeset [4328] by Nicklas Nordborg
Fixes #1053: Values.getBoolean() is case-sensitive
7:58 AM Ticket #1053 (Values.getBoolean() is case-sensitive) closed by Nicklas Nordborg
fixed: (In [4328]) Fixes #1053: Values.getBoolean() is case-sensitive
7:55 AM Ticket #1053 (Values.getBoolean() is case-sensitive) updated by Nicklas Nordborg
Status, Owner changed
7:55 AM Ticket #1053 (Values.getBoolean() is case-sensitive) created by Nicklas Nordborg
Trying to convert string values to boolean. Using lowercase strings, …

Jun 4, 2008:

2:56 PM Ticket #1047 (Type.BOOLEAN.parseString() doesn't convert strings as expected) updated by Nicklas Nordborg
Status, Owner changed
2:22 PM Ticket #1049 (Add the 'quadratic mean' to available Avg. method's for formulas.) updated by Nicklas Nordborg
Milestone, Priority changed
1:36 PM Ticket #1050 (Add core support for storing analysed data in files instead of in the ...) updated by Nicklas Nordborg
Description changed
1:35 PM Ticket #1050 (Add core support for storing analysed data in files instead of in the ...) updated by Nicklas Nordborg
Description changed
1:35 PM Ticket #1052 (Core analysis plug-ins need to be aware of bioassaysets that use data ...) created by Nicklas Nordborg
This is related to #1029 and depends on #1050. All existing core …
1:29 PM Ticket #1050 (Add core support for storing analysed data in files instead of in the ...) updated by Nicklas Nordborg
Description changed
1:29 PM Ticket #1051 (Add support in the GUI for accssing files used to store analysed data) created by Nicklas Nordborg
This is related to to #1029 and depends on #1050. The first thing is …
1:22 PM Ticket #1050 (Add core support for storing analysed data in files instead of in the ...) created by Nicklas Nordborg
This is related to #1029, but is only about changes needed in the core …
11:45 AM Ticket #1049 (Add the 'quadratic mean' to available Avg. method's for formulas.) created by Johan Vallon-Christersson
http://en.wikipedia.org/wiki/Quadratic_mean
11:39 AM Ticket #1047 (Type.BOOLEAN.parseString() doesn't convert strings as expected) updated by Nicklas Nordborg
Yes, "0" is also converted to "false". I missed it in the list. Here …
11:21 AM Ticket #1048 (Plugin configuration wizard display/parse incorrectly (when ...) updated by Johan Vallon-Christersson
If you create a new raw data import configuration and use the attached …
11:13 AM Ticket #1047 (Type.BOOLEAN.parseString() doesn't convert strings as expected) updated by Johan Vallon-Christersson
Would the fix you describe convert "0" to "false"?
11:10 AM Ticket #1048 (Plugin configuration wizard display/parse incorrectly (when ...) updated by Nicklas Nordborg
I don't understand the description of this problem. Please provide …
11:05 AM Ticket #1047 (Type.BOOLEAN.parseString() doesn't convert strings as expected) updated by Nicklas Nordborg
Milestone, Priority, Component changed
It seems like the current implementation which falls back to Hibernate …
11:02 AM Ticket #1048 (Plugin configuration wizard display/parse incorrectly (when ...) updated by Johan Vallon-Christersson
912 rows in the attached file
11:02 AM list_005ffiles_jsp.java attached to Ticket #1045 by Jari Häkkinen
11:00 AM 912rows_Agilent_GE2-v5.txt attached to Ticket #1048 by Johan Vallon-Christersson
Truncated raw data file (913 rows). Note, data header on line10
10:59 AM files_in_analysis-0.1.txt attached to Ticket #1029 by Jari Häkkinen
10:58 AM Ticket #1029 (Write specification for support of files in analysis tree (ie not ...) updated by Jari Häkkinen
Description changed
Added first draft as attachement, bump the version number and attach …
10:56 AM Ticket #1048 (Plugin configuration wizard display/parse incorrectly (when ...) created by Johan Vallon-Christersson
When testing with file (parsing file) the rows above defined data …
10:53 AM Ticket #1045 (File list view creates an exception) updated by Jari Häkkinen
The ticket is closed but I added the list java file causing the …
10:13 AM Ticket #1046 (Remember closed/expanded node status in the hierarchical tree of ...) updated by Johan Vallon-Christersson
Ok - good. Thank's.
10:08 AM Ticket #1047 (Type.BOOLEAN.parseString() doesn't convert strings as expected) created by Johan Vallon-Christersson
When importing Raw data (type = Agilent), data from the file is mapped …

Jun 3, 2008:

4:14 PM Changeset [4327] by Martin Svensson
References #1010 Using the SimpleProgressReporter to get progress of …
4:14 PM Ticket #1010 (Display progress reporter for plug-ins that are executing with the ...) updated by Martin Svensson
(In [4327]) References #1010 Using the SimpleProgressReporter to get …
3:07 PM Changeset [4326] by Nicklas Nordborg
Fixes #1045. References #1016.
3:07 PM Tickets #1016,​1045 batch updated by Nicklas Nordborg
fixed: (In [4326]) Fixes #1045. References #1016.
2:58 PM Ticket #1045 (File list view creates an exception) updated by Nicklas Nordborg
Owner, Status changed
I have traced this to a possible problem for all enumerated columns …
2:35 PM Ticket #1046 (Remember closed/expanded node status in the hierarchical tree of ...) updated by Nicklas Nordborg
Type changed
This can already be remembered but you have to trigger an action that …
2:00 PM Ticket #1046 (Remember closed/expanded node status in the hierarchical tree of ...) created by Johan Vallon-Christersson
Currently, closed nodes in the hierarchical tree of Bioassay sets (in …
12:18 PM Ticket #1045 (File list view creates an exception) updated by Nicklas Nordborg
Most likely this doesn't have anything to do with which user is logged …
11:25 AM Changeset [4325] by Nicklas Nordborg
Fixes #1038: Provide manual parameter for 'spotsize' in GAL exporter
11:25 AM Ticket #1038 (Provide manual parameter for 'spotsize' in GAL exporter) closed by Nicklas Nordborg
fixed: (In [4325]) Fixes #1038: Provide manual parameter for 'spotsize' in …
11:07 AM Ticket #1045 (File list view creates an exception) created by Jari Häkkinen
When I try to view my files as ordinary user I get the below …
10:59 AM Ticket #1038 (Provide manual parameter for 'spotsize' in GAL exporter) updated by Nicklas Nordborg
Status, Owner changed
10:58 AM Changeset [4324] by Nicklas Nordborg
Fixes #532.
10:58 AM Ticket #532 (Read "Jobs" section) closed by Nicklas Nordborg
fixed: (In [4324]) Fixes #532.
9:43 AM Ticket #532 (Read "Jobs" section) updated by Nicklas Nordborg
Owner, Status changed
9:41 AM Ticket #1036 (Implement 'service' extension point) closed by Nicklas Nordborg
fixed: Seems to be working fine right now.
9:40 AM Ticket #1015 (Add reporter list from tables that list reporters/reporter info.) updated by Nicklas Nordborg
Status, Owner changed
9:40 AM Ticket #1016 (Filter table using a reporter list) updated by Nicklas Nordborg
Owner, Status changed
9:40 AM Ticket #1019 (Reporter list manager - Create reporter list using combinations of ...) updated by Nicklas Nordborg
Owner, Status changed

Jun 2, 2008:

1:11 PM Ticket #1044 (MeV launch returns a 'jsp' extension not a 'jnlp') updated by Nicklas Nordborg
Milestone changed
1:11 PM Ticket #1044 (MeV launch returns a 'jsp' extension not a 'jnlp') closed by Nicklas Nordborg
worksforme: It is a browser-related problem.
12:22 PM Ticket #1044 (MeV launch returns a 'jsp' extension not a 'jnlp') created by Jari Häkkinen
I am not sure if this should be in this ticket system or baseplugins …
11:12 AM Ticket #1029 (Write specification for support of files in analysis tree (ie not ...) updated by Jari Häkkinen
Status changed

May 30, 2008:

12:13 PM services.xml attached to Ticket #1036 by Nicklas Nordborg
Example file for dummy services
12:06 PM Changeset [4323] by Nicklas Nordborg
Fixes #1043: JarClassLoader.getInstance() doesn't create a new class …
12:06 PM Ticket #1043 (JarClassLoader.getInstance() doesn't create a new class loader if a ...) closed by Nicklas Nordborg
fixed: (In [4323]) Fixes #1043: JarClassLoader.getInstance() doesn't create a …
11:22 AM Ticket #1043 (JarClassLoader.getInstance() doesn't create a new class loader if a ...) updated by Nicklas Nordborg
Status changed
11:22 AM Ticket #1043 (JarClassLoader.getInstance() doesn't create a new class loader if a ...) created by Nicklas Nordborg
The documentation on the method says that a new class loader should be …
11:15 AM Changeset [4322] by Nicklas Nordborg
Fixes #1042: Improve error handling in the extensions system
11:15 AM Ticket #1042 (Improve error handling in the extensions system) closed by Nicklas Nordborg
fixed: (In [4322]) Fixes #1042: Improve error handling in the extensions system
10:58 AM Ticket #1042 (Improve error handling in the extensions system) updated by Nicklas Nordborg
Status changed
10:58 AM Ticket #1042 (Improve error handling in the extensions system) created by Nicklas Nordborg
The extensions system contains code like the example below in several …

May 29, 2008:

3:02 PM Ticket #1041 (ZipException: error in opening zip file in JarClassLoader if a JAR ...) closed by Nicklas Nordborg
fixed: (In [4321]) Fixes #1041: ZipException: error in opening zip file in …
3:02 PM Changeset [4321] by Nicklas Nordborg
Fixes #1041: ZipException: error in opening zip file in JarClassLoader
2:43 PM Ticket #1041 (ZipException: error in opening zip file in JarClassLoader if a JAR ...) updated by Nicklas Nordborg
Status changed
2:43 PM Ticket #1041 (ZipException: error in opening zip file in JarClassLoader if a JAR ...) created by Nicklas Nordborg
Here is the interesting parts of the stacktrace: […] The starting …
1:39 PM Changeset [4320] by Nicklas Nordborg
References #1036: Implement 'service' extension point Now it is ready …
1:39 PM Ticket #1036 (Implement 'service' extension point) updated by Nicklas Nordborg
(In [4320]) References #1036: Implement 'service' extension point Now …
11:38 AM Changeset [4319] by Nicklas Nordborg
Fixes #1040: Exceptions when stopping Tomcat
11:38 AM Ticket #1040 (Exceptions when stopping Tomcat) closed by Nicklas Nordborg
fixed: (In [4319]) Fixes #1040: Exceptions when stopping Tomcat
11:25 AM Ticket #1040 (Exceptions when stopping Tomcat) updated by Nicklas Nordborg
Status changed
11:11 AM Ticket #1040 (Exceptions when stopping Tomcat) created by Nicklas Nordborg
This has been around for a long time... When stopping Tomcat using the …

May 28, 2008:

8:21 PM Ticket #1036 (Implement 'service' extension point) updated by Nicklas Nordborg
Owner, Status, Milestone changed
8:21 PM Ticket #408 (Implement FTP server) closed by Nicklas Nordborg
invalid: Moved to http://baseplugins.thep.lu.se/wiki/net.sf.basedb.ftp
8:01 AM Ticket #1039 (link to list of plugins is broken) closed by Martin Svensson
fixed: The link is fixed
8:00 AM WikiStart edited by Martin Svensson
Repaired a broken link (diff)
12:15 AM Ticket #1039 (link to list of plugins is broken) created by Peter Johansson
Link on first page core plug-ins with sample configuration files

May 27, 2008:

12:21 PM Ticket #1038 (Provide manual parameter for 'spotsize' in GAL exporter) created by Nicklas Nordborg
Since the 'spotsize' column wasn't added until BASE 2.7 (#999), many …
12:05 PM Ticket #1037 (Add 'id' column to all list pages) updated by Nicklas Nordborg
The most important list pages are the biomaterials section (biosource, …
11:55 AM Ticket #1037 (Add 'id' column to all list pages) created by Nicklas Nordborg
The internal ID of items is not visible anywhere in the web interface. …
11:55 AM Ticket #979 (Biomaterial LIMS) updated by Johan Vallon-Christersson
Owner changed
11:55 AM Ticket #979 (Biomaterial LIMS) updated by Johan Vallon-Christersson
Milestone changed
10:16 AM Ticket #639 (exportPureMatrix method) closed by Jari Häkkinen
fixed: changeset:4318 adds functionality to export 2-channel data. ch1/ch2 …
10:08 AM Changeset [4318] by Jari Häkkinen
Addresses #639. Exporting plain matrix for 1 and 2 channel data.
10:08 AM Ticket #639 (exportPureMatrix method) updated by Jari Häkkinen
(In [4318]) Addresses #639. Exporting plain matrix for 1 and 2 channel …
9:36 AM Ticket #1036 (Implement 'service' extension point) created by Nicklas Nordborg
It could be useful to have an extension point that can be used for …
9:14 AM Ticket #1032 (Apache server complains "Request-URI Too Large") updated by Nicklas Nordborg
Ticket #896 solved a similar problem and also contains some background …
8:44 AM Changeset [4317] by Nicklas Nordborg
Fixes #1022: Add support for using regular expressions in queries
8:44 AM Ticket #1022 (Add support for using regular expressions in queries) closed by Nicklas Nordborg
fixed: (In [4317]) Fixes #1022: Add support for using regular expressions in …
8:17 AM Changeset [4316] by Jari Häkkinen
Removed obsolete/stray code.

May 26, 2008:

2:15 PM Ticket #1022 (Add support for using regular expressions in queries) updated by Nicklas Nordborg
Milestone, Status, Owner changed
2:12 PM Changeset [4315] by Nicklas Nordborg
Fixes #1035: Exception when applying filter on multiple Item type in …
2:12 PM Ticket #1035 (Exception when applying filter on multiple Item type in some list views) closed by Nicklas Nordborg
fixed: (In [4315]) Fixes #1035: Exception when applying filter on multiple …
2:10 PM Ticket #1035 (Exception when applying filter on multiple Item type in some list views) updated by Nicklas Nordborg
Summary changed
1:11 PM Ticket #1035 (Exception when applying filter on multiple Item type in some list views) updated by Nicklas Nordborg
Milestone, Status, Summary, Priority, Version, Owner changed
This problem is present in lists with multiple item types: * View -> …
1:01 PM Ticket #967 (Assign the parent directory permissions to new files/directories) closed by Nicklas Nordborg
fixed: (In [4314]) Fixes #967: Assign the parent directory permissions to new …
1:01 PM Changeset [4314] by Nicklas Nordborg
Fixes #967: Assign the parent directory permissions to new …
11:52 AM Ticket #981 (Share all subdirectories and files when sharing a directory) updated by Nicklas Nordborg
(In [4313]) References #981: Share all subdirectories and files when …
11:52 AM Changeset [4313] by Nicklas Nordborg
References #981: Share all subdirectories and files when sharing a …
9:31 AM Changeset [4312] by Nicklas Nordborg
Fixes #981: Share all subdirectories and files when sharing a directory
9:31 AM Ticket #981 (Share all subdirectories and files when sharing a directory) closed by Nicklas Nordborg
fixed: (In [4312]) Fixes #981: Share all subdirectories and files when …
9:11 AM Ticket #639 (exportPureMatrix method) updated by Jari Häkkinen
Description changed
Just a note to tell you all that I am working on this now.
8:41 AM Ticket #408 (Implement FTP server) updated by Nicklas Nordborg
I have been playing with this a little bit the last week. It was not …
8:22 AM Ticket #981 (Share all subdirectories and files when sharing a directory) updated by Nicklas Nordborg
Summary, Owner, Status, Description, Priority, Milestone changed
8:20 AM Ticket #967 (Assign the parent directory permissions to new files/directories) updated by Nicklas Nordborg
Milestone, Status, Owner, Summary changed
This would be very useful once FTP access (#408) is implemented. It is …
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