Timeline
Nov 28, 2007:
- 3:44 PM Changeset [4017] by
- References #847 Updated some javadocs.
- 3:44 PM Ticket #847 (Update javadoc) updated by
- (In [4017]) References #847 Updated some javadocs.
- 2:27 PM Changeset [4016] by
- Fixes #553: Read "Javadoc" section
- 2:27 PM Ticket #553 (Read "Javadoc" section) closed by
- fixed: (In [4016]) Fixes #553: Read "Javadoc" section
- 1:55 PM Ticket #553 (Read "Javadoc" section) updated by
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Status, Owner, Description changed
- 1:48 PM Changeset [4015] by
- References #848: Removed unused import
- 1:48 PM Ticket #848 (Annotation importer should not require role-based WRITE permission to ...) updated by
- (In [4015]) References #848: Removed unused import
- 1:47 PM Changeset [4014] by
- Fixes #848: Annotation importer should not require role-based WRITE …
- 1:47 PM Ticket #848 (Annotation importer should not require role-based WRITE permission to ...) closed by
- fixed: (In [4014]) Fixes #848: Annotation importer should not require …
- 1:42 PM Ticket #848 (Annotation importer should not require role-based WRITE permission to ...) updated by
-
Status, Owner, Type, Summary changed
- 1:39 PM Changeset [4013] by
- References #514: Change permissions in Power User Updated test …
- 1:39 PM Ticket #514 (Change permissions in Power User) updated by
- (In [4013]) References #514: Change permissions in Power User Updated …
- 1:37 PM Changeset [4012] by
- Fixes #849: Error when creating an experiment: Raw data types doesn't match
- 1:37 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) closed by
- fixed: (In [4012]) Fixes #849: Error when creating an experiment: Raw data …
- 1:36 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) updated by
-
Summary, Priority changed
I have found the problem. The reason it doesn't work the second time … - 1:28 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) updated by
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Status, Owner changed
- 1:15 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) updated by
- I have an additional comment to make. Before trying to create the …
- 1:12 PM Ticket #849 (Error when creating an experiment: Raw data types doesn't match) created by
- 1. First you must have at least two Affymetrix raw bioassays. 2. Go …
- 12:11 PM Ticket #847 (Update javadoc) updated by
- (In [4011]) References #847 Updated some javadocs. Removed an …
- 12:11 PM Changeset [4011] by
- References #847 Updated some javadocs. Removed an exception, that is …
- 12:01 PM Ticket #848 (Annotation importer should not require role-based WRITE permission to ...) created by
- The required permission are usually only given to administrators. The …
Nov 27, 2007:
- 5:31 PM DownloadPage edited by
- (diff)
- 5:12 PM Changeset [4010] by
- Tagging release 2.5.0beta2
- 2:39 PM Changeset [4009] by
- References #822: Create a separate WS-client dist Use Apache …
- 2:39 PM Ticket #822 (Create a separate WS-client dist) updated by
- (In [4009]) References #822: Create a separate WS-client dist Use …
- 2:02 PM Changeset [4008] by
- Fixes #846: Add query parameters to QueryOptions
- 2:02 PM Ticket #846 (Add query parameters to QueryOptions) closed by
- fixed: (In [4008]) Fixes #846: Add query parameters to QueryOptions
- 1:36 PM Ticket #847 (Update javadoc) updated by
-
Status changed
- 1:36 PM Ticket #847 (Update javadoc) created by
- Some javadocs are missing one or several tags.
- 1:32 PM Ticket #846 (Add query parameters to QueryOptions) updated by
-
Status, Owner changed
- 1:31 PM Ticket #846 (Add query parameters to QueryOptions) created by
- When doing a web services request with a restriction you currently …
- 1:07 PM Ticket #845 (Error message in list view of Array design:) closed by
- invalid: The error was caused by a null value on 'sortProperty' in the context. …
- 12:29 PM Changeset [4007] by
- References #806: Experimental factor values display on Experiment page …
- 12:29 PM Ticket #806 (Experimental factor values display on Experiment page can only display ...) updated by
- (In [4007]) References #806: Experimental factor values display on …
- 9:00 AM Tickets #721,844 batch updated by
- fixed: (In [4006]) Fixes #844: File.isUsed() doesn't check if a file has been …
- 9:00 AM Changeset [4006] by
- Fixes #844: File.isUsed() doesn't check if a file has been used in a …
- 8:56 AM Ticket #845 (Error message in list view of Array design:) created by
- could not resolve property: null of: …
- 8:36 AM Ticket #844 (File.isUsed() doesn't check if a file has been used in a FileSet.) updated by
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Owner, Status changed
- 8:25 AM Ticket #844 (File.isUsed() doesn't check if a file has been used in a FileSet.) updated by
-
Owner, Status changed
Nov 26, 2007:
- 4:00 PM Changeset [4005] by
- Fixes #596 Read "Appendix: raw-data-types.xml reference"
- 4:00 PM Ticket #596 (Read "Appendix: raw-data-types.xml reference") closed by
- fixed: (In [4005]) Fixes #596 Read "Appendix: raw-data-types.xml reference"
- 2:39 PM Ticket #608 (Delete 'removed' items directly from list views) updated by
- (In [4004]) References #608: Delete 'removed' items directly from list …
- 2:39 PM Changeset [4004] by
- References #608: Delete 'removed' items directly from list views …
- 2:22 PM Changeset [4003] by
- Fixes #608: Delete 'removed' items directly from list views
- 2:22 PM Ticket #608 (Delete 'removed' items directly from list views) closed by
- fixed: (In [4003]) Fixes #608: Delete 'removed' items directly from list views
- 1:36 PM Ticket #596 (Read "Appendix: raw-data-types.xml reference") updated by
- (In [4002]) References #596
- 1:36 PM Changeset [4002] by
- References #596
- 1:08 PM Ticket #844 (File.isUsed() doesn't check if a file has been used in a FileSet.) created by
- The file is reported as not used, but when trying to delete it the …
- 1:07 PM Ticket #596 (Read "Appendix: raw-data-types.xml reference") updated by
-
Status, Owner changed
- 1:04 PM Ticket #553 (Read "Javadoc" section) updated by
-
Priority, Owner, Status, Summary changed
- 1:04 PM Changeset [4001] by
- Fixes #843: Display error message from original exception:s
- 1:04 PM Ticket #843 (Display error message from original exception:s) closed by
- fixed: (In [4001]) Fixes #843: Display error message from original exception:s
- 1:04 PM Ticket #843 (Display error message from original exception:s) created by
- When an exception that has linked exceptions is thrown only the …
- 1:03 PM Changeset [4000] by
- References #553 Write "Javadoc" section.
- 1:03 PM Ticket #553 (Read "Javadoc" section) updated by
- (In [4000]) References #553 Write "Javadoc" section.
- 12:36 PM Changeset [3999] by
- Fixes #842: PluginDefinition.isUsed() throws exception
- 12:36 PM Ticket #842 (PluginDefinition.isUsed() throws exception) closed by
- fixed: (In [3999]) Fixes #842: PluginDefinition.isUsed() throws exception
- 12:32 PM Ticket #842 (PluginDefinition.isUsed() throws exception) updated by
-
Status, Owner changed
- 12:32 PM Ticket #842 (PluginDefinition.isUsed() throws exception) created by
- Node '<query id="GET_JOBS_FOR_PLUGINDEFINITION">' was not found in …
- 11:26 AM Ticket #706 (Averagemethod on raw data types) updated by
-
Cc, Status changed
- 10:02 AM Ticket #841 (Investigate BASE support for uploading files >2GB) created by
- A question about file upload of files > 2GB was recently asked on the …
- 9:28 AM Changeset [3998] by
- References #825: Include items 'shared to me' by default The default …
- 9:28 AM Ticket #825 (Fix bad documentation screenshots) updated by
- (In [3998]) References #825: Include items 'shared to me' by default …
- 8:23 AM Ticket #608 (Delete 'removed' items directly from list views) updated by
-
Milestone, Priority, Status, Owner, Description changed
- 7:59 AM Ticket #840 (MeV leaves an unclosed DbControl) closed by
- fixed: (In [3997]) Fixes #840: MeV leaves an unclosed DbControl
- 7:59 AM Changeset [3997] by
- Fixes #840: MeV leaves an unclosed DbControl
- 7:58 AM Ticket #840 (MeV leaves an unclosed DbControl) created by
- Stacktrace from Tomcat logfile: […]
Nov 23, 2007:
- 3:55 PM Ticket #553 (Read "Javadoc" section) updated by
- The javadoc section should be a subsection of 'Write documentation'.
- 3:02 PM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) updated by
- Bob here... You are right, it's not the different array designs. …
- 3:02 PM Milestone BASE 2.4.6 completed
- Revision Log: log:branches/2.4-stable@3895:3982
- 1:50 PM Ticket #596 (Read "Appendix: raw-data-types.xml reference") updated by
-
Summary, Owner, Priority, Status changed
- 1:49 PM Changeset [3996] by
- References #596: Appendix: raw-data-types.xml reference
- 1:49 PM Ticket #596 (Read "Appendix: raw-data-types.xml reference") updated by
- (In [3996]) References #596: Appendix: raw-data-types.xml reference
- 1:17 PM Ticket #553 (Read "Javadoc" section) updated by
-
Description, Milestone, Owner, Status changed
- 11:32 AM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) updated by
- Replying to nicklas: > The calculations seems to work if …
- 11:28 AM Ticket #596 (Read "Appendix: raw-data-types.xml reference") updated by
-
Description changed
- 11:27 AM Ticket #596 (Read "Appendix: raw-data-types.xml reference") updated by
-
Status, Owner, Description, Milestone changed
- 9:51 AM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) updated by
- I have investigated the code a bit more and done some test runs. I …
Nov 22, 2007:
- 4:35 PM Changeset [3995] by
- Fixes #839 Download immediately in the table exporter throws an …
- 4:35 PM Ticket #839 (Download immediately in the table exporter throws an exception in ...) closed by
- fixed: (In [3995]) Fixes #839 Download immediately in the table exporter …
- 4:31 PM Ticket #839 (Download immediately in the table exporter throws an exception in ...) created by
- 3:44 PM Ticket #838 (Change default value of Blockgroup size to 0 in Lowess) updated by
-
Summary changed
- 3:40 PM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) updated by
- I think it is a defect since it obviosuly produces a result for some …
- 3:34 PM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) updated by
- This is not a defect but a limitation in the algorithm. The reason is …
- 3:25 PM Ticket #838 (Change default value of Blockgroup size to 0 in Lowess) created by
- The parameter Blockgroup size should be set default to 0. This should …
- 2:46 PM Changeset [3994] by
- Merged patch release 2.4.6 to the trunk. Delta 2.4.6 - 2.5
- 2:38 PM Changeset [3993] by
- References #827 Updated some javadoc to the new methods.
- 2:38 PM Ticket #827 (Add more web services methods) updated by
- (In [3993]) References #827 Updated some javadoc to the new methods.
- 2:21 PM Ticket #729 (./jobagent.sh should accept command `status`) closed by
- fixed: (In [3992]) Fixes #728: jobagent.sh should accept command status Also …
- 2:21 PM Ticket #728 (./jobagent.sh start does not work) updated by
- The above checkin should go to #729 and not this ticket.
- 2:19 PM Ticket #728 (./jobagent.sh start does not work) updated by
-
Resolution changed
(In [3992]) Fixes #728: jobagent.sh should accept commandstatus… - 2:19 PM Changeset [3992] by
-
Fixes #728: jobagent.sh should accept command
statusAlso made the … - 2:15 PM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) updated by
- [http://base.thep.lu.se/browser/tags/2.4.6/src/plugins/core/net/sf/base …
- 2:12 PM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) updated by
- I don't think it has anything to do with the array designs being …
- 2:06 PM Changeset [3991] by
- Fixes #827 Reporters can now be exported through web services. Two new …
- 2:06 PM Ticket #827 (Add more web services methods) closed by
- fixed: (In [3991]) Fixes #827 Reporters can now be exported through web …
- 1:26 PM Ticket #837 (Lowess plugin. Error: Sum of weigths in line_fit is not positive) created by
- Sorry if this should go to baseplugins trac, but as a core plugin …
- 1:25 PM Ticket #831 (List box is too small to display full text and offers no horizontal scroll) closed by
- fixed: (In [3990]) Fixes #831: List box is too small to display full text and …
- 1:25 PM Changeset [3990] by
- Fixes #831: List box is too small to display full text and offers no …
- 1:01 PM Changeset [3989] by
- Fixes #836: Toolbar in the table taglib generates incomplete HTML
- 1:01 PM Ticket #836 (Toolbar in the table taglib generates incomplete HTML) closed by
- fixed: (In [3989]) Fixes #836: Toolbar in the table taglib generates …
- 12:31 PM Ticket #836 (Toolbar in the table taglib generates incomplete HTML) created by
- There seems to be missing > in the <table> tag. I think this only …
- 12:04 PM Ticket #835 (Include items 'shared to me' by default) closed by
- fixed: (In [3988]) Fixes #835: Include items 'shared to me' by default
- 12:04 PM Changeset [3988] by
- Fixes #835: Include items 'shared to me' by default
- 12:04 PM Ticket #835 (Include items 'shared to me' by default) updated by
-
Status, Summary, Owner changed
- 12:01 PM Ticket #835 (Include items 'shared to me' by default) created by
- The default setting on list pages is to only include items 'owned by …
- 11:50 AM Ticket #831 (List box is too small to display full text and offers no horizontal scroll) updated by
-
Summary, Milestone, Status changed
On the fortunate side I found that a solution building on the second … - 9:24 AM Ticket #831 (List box is too small to display full text and offers no horizontal scroll) updated by
- Unfortunately list boxes doesn't have support for horizontal …
- 8:28 AM Ticket #832 (Button for selecting all values or no values in an enumerated ...) closed by
- fixed: (In [3987]) Fixes #832: Button for selecting all values or no values …
- 8:28 AM Changeset [3987] by
- Fixes #832: Button for selecting all values or no values in an …
- 8:28 AM Ticket #832 (Button for selecting all values or no values in an enumerated ...) updated by
-
Summary, Description changed
- 8:26 AM Ticket #832 (Button for selecting all values or no values in an enumerated ...) updated by
-
Milestone, Priority, Status changed
- 8:08 AM Changeset [3986] by
- Fixes #833: Removing items in the analysis tree
- 8:08 AM Ticket #833 (Removing items in the analysis tree) closed by
- fixed: (In [3986]) Fixes #833: Removing items in the analysis tree
- 7:57 AM Ticket #833 (Removing items in the analysis tree) updated by
-
Milestone, Status, Priority changed
It is not a browser related issue. The bug is caused by …
Nov 21, 2007:
- 5:04 PM Ticket #834 (Trashcan cannot be emptied) updated by
- I think this problem is related to what is in the trashcan. I am not …
- 3:53 PM Ticket #834 (Trashcan cannot be emptied) updated by
- I forgot to mention that when one clicks the Empty Trash button the …
- 3:51 PM Ticket #834 (Trashcan cannot be emptied) created by
- Trashcan cannot be emptied - items in it do not display and attempting …
- 3:15 PM Ticket #833 (Removing items in the analysis tree) created by
- I've seen this bug occur before but I haven't reported it since I …
- 12:56 PM Ticket #729 (./jobagent.sh should accept command `status`) updated by
-
Owner, Status changed
Ok, time is running out on this one. I'll add a 'status' command which …
Nov 20, 2007:
- 3:33 PM Ticket #832 (Button for selecting all values or no values in an enumerated ...) created by
- When the user is presented an enumerated parameter with multiplicity …
- 3:23 PM Ticket #831 (List box is too small to display full text and offers no horizontal scroll) created by
- I'm adding members to a project. I the name is to long the permission …
- 2:08 PM Changeset [3985] by
- Fixes #830
- 2:08 PM Ticket #830 (Table exporter throws exception when exporting selected reporters in a ...) closed by
- fixed: (In [3985]) Fixes #830
- 2:08 PM Ticket #830 (Table exporter throws exception when exporting selected reporters in a ...) updated by
-
Milestone changed
- 2:02 PM Changeset [3984] by
- References #827: Add more web services methods Added example code for …
- 2:02 PM Ticket #827 (Add more web services methods) updated by
- (In [3984]) References #827: Add more web services methods Added …
- 11:28 AM Ticket #827 (Add more web services methods) updated by
- (In [3983]) References #827: Add more web services methods * Added …
- 11:28 AM Changeset [3983] by
- References #827: Add more web services methods * Added getById() …
- 11:19 AM DownloadPage edited by
- Releasing 2.4.6 (diff)
- 11:12 AM Changeset [3982] by
- Tagging version 2.4.6
- 11:09 AM Changeset [3981] by
- Preparing release 2.4.6
Nov 19, 2007:
- 2:54 PM Ticket #830 (Table exporter throws exception when exporting selected reporters in a ...) updated by
-
Owner, Status changed
- 2:53 PM Ticket #830 (Table exporter throws exception when exporting selected reporters in a ...) created by
- The table exporter in the web client fails when exporting selected …
- 2:20 PM Changeset [3980] by
- Fixes #829: Item not found: Annotation[new]
- 2:20 PM Ticket #829 (Item not found: Annotation[new]) closed by
- fixed: (In [3980]) Fixes #829: Item not found: Annotation[new]
- 2:04 PM Ticket #829 (Item not found: Annotation[new]) updated by
-
Status, Owner changed
- 2:04 PM Ticket #829 (Item not found: Annotation[new]) created by
- The following error message is displayed when annotating an item and …
- 2:00 PM Ticket #828 (Raw data importer should be able to set annotations on the imported ...) closed by
- fixed: (In [3979]) Fixes #828: Raw data importer should be able to set …
- 2:00 PM Changeset [3979] by
- Fixes #828: Raw data importer should be able to set annotations on the …
Nov 16, 2007:
- 2:41 PM Changeset [3978] by
- References #827 Created ReporterService and a method to get the …
- 2:41 PM Ticket #827 (Add more web services methods) updated by
- (In [3978]) References #827 Created ReporterService and a method to …
- 11:59 AM Changeset [3977] by
- References #827: Add more web services methods Added …
- 11:59 AM Ticket #827 (Add more web services methods) updated by
- (In [3977]) References #827: Add more web services methods Added …
- 11:42 AM Ticket #827 (Add more web services methods) updated by
- (In [3976]) References #827 Added ExperimentService.getReporterLists().
- 11:42 AM Changeset [3976] by
- References #827 Added ExperimentService.getReporterLists().
- 11:25 AM Ticket #828 (Raw data importer should be able to set annotations on the imported ...) created by
- When importing raw data with the RawDataFileFileImporter it would be …
- 9:42 AM Changeset [3975] by
- References #827. Updated javadoc related to last check-in
- 9:42 AM Ticket #827 (Add more web services methods) updated by
- (In [3975]) References #827. Updated javadoc related to last check-in
- 9:28 AM Changeset [3974] by
- References #827: Add more web services methods Added Transferable and …
- 9:28 AM Ticket #827 (Add more web services methods) updated by
- (In [3974]) References #827: Add more web services methods Added …
- 8:47 AM Changeset [3973] by
- References #827: Add more web services methods * Added services to …
- 8:47 AM Ticket #827 (Add more web services methods) updated by
- (In [3973]) References #827: Add more web services methods * Added …
Nov 15, 2007:
- 1:37 PM Ticket #827 (Add more web services methods) created by
- Some minor additions to make existing services more complete * …
- 12:49 PM Ticket #492 (Web services) updated by
- (In [3972]) References #492: Web services Added …
- 12:49 PM Changeset [3972] by
- References #492: Web services Added ServicesUtil.listToInfo() method …
- 10:04 AM Ticket #825 (Fix bad documentation screenshots) closed by
- fixed: (In [3971]) Fixes #825 The screenshots have been replaced.
- 10:04 AM Changeset [3971] by
- Fixes #825 The screenshots have been replaced.
- 9:14 AM Changeset [3970] by
- Fixes #826: CEL file validator doesn't work for binary XDA type files
- 9:14 AM Ticket #826 (CEL file validator doesn't work for binary XDA type files) closed by
- fixed: (In [3970]) Fixes #826: CEL file validator doesn't work for binary XDA …
Nov 14, 2007:
- 8:23 PM Ticket #826 (CEL file validator doesn't work for binary XDA type files) updated by
-
Description, Status, Owner changed
- 8:23 PM Ticket #826 (CEL file validator doesn't work for binary XDA type files) created by
- It does work for text format and binary Calvin format. The validation …
- 3:00 PM Ticket #825 (Fix bad documentation screenshots) updated by
-
Owner, Status changed
- 2:17 PM Ticket #809 (Read Web services documentation) closed by
- fixed: (In [3969]) Fixes #809: Read Web services documentation
- 2:17 PM Changeset [3969] by
- Fixes #809: Read Web services documentation
- 2:11 PM Ticket #825 (Fix bad documentation screenshots) created by
- Some of the screenshots in the docbook documentation look very …
- 2:10 PM Ticket #824 (Update appendix: Menuguide) updated by
-
Milestone changed
- 2:04 PM Ticket #824 (Update appendix: Menuguide) closed by
- fixed: (In [3968]) Fixes #824 appendix is now updated
- 2:04 PM Changeset [3968] by
- Fixes #824 appendix is now updated
- 1:42 PM Changeset [3967] by
- References #492: Web services axis2.xml is now installed in the …
- 1:42 PM Ticket #492 (Web services) updated by
- (In [3967]) References #492: Web services axis2.xml is now installed …
- 1:39 PM Ticket #824 (Update appendix: Menuguide) updated by
-
Status changed
- 1:39 PM Ticket #824 (Update appendix: Menuguide) created by
- New menu choices have been added to the webclient and need to be …
- 12:45 PM Ticket #823 (Refactor classes in net.sf.basedb.ws.info.*) closed by
- fixed
- 12:04 PM Changeset [3966] by
- Fixes #666 Picture added
- 12:04 PM Ticket #666 (Image in chapter 6.2.3) closed by
- fixed: (In [3966]) Fixes #666 Picture added
- 11:07 AM Ticket #666 (Image in chapter 6.2.3) updated by
-
Owner, Status changed
- 11:04 AM Changeset [3965] by
- Fixed classpath for programs in /bin
- 9:48 AM Ticket #809 (Read Web services documentation) updated by
-
Status, Owner changed
- 9:45 AM Changeset [3964] by
- References #492: Web services Redesigned file download to work with …
- 9:45 AM Ticket #492 (Web services) updated by
- (In [3964]) References #492: Web services Redesigned file download to …
- 9:40 AM Changeset [3963] by
- References #821: Split up core.aar Only create regenerate WSDL files …
- 9:40 AM Ticket #821 (Split up core.aar) updated by
- (In [3963]) References #821: Split up core.aar Only create regenerate …
- 9:22 AM Ticket #821 (Split up core.aar) updated by
- (In [3962]) References #821: Split up core.aar Fixed classpath for …
- 9:22 AM Changeset [3962] by
- References #821: Split up core.aar Fixed classpath for test programs.
Nov 13, 2007:
- 8:32 PM Ticket #823 (Refactor classes in net.sf.basedb.ws.info.*) updated by
- (IN [3960]) References #823: Added VersionInfo class to hold BASE …
- 8:25 PM Ticket #822 (Create a separate WS-client dist) closed by
- fixed: (In [3961]) Fixes #822.
- 8:25 PM Changeset [3961] by
- Fixes #822.
- 8:25 PM Changeset [3960] by
- References #807 Added documentation for plug-in developers.
- 8:25 PM Ticket #807 (Read documentation related to ticket #721: Store data in files instead ...) updated by
- (In [3960]) References #807 Added documentation for plug-in developers.
- 4:30 PM Ticket #823 (Refactor classes in net.sf.basedb.ws.info.*) updated by
- (In [3959]) References #823 Added a serialVersionUID to the info …
- 4:30 PM Changeset [3959] by
- References #823 Added a serialVersionUID to the info classes that …
- 2:59 PM Changeset [3958] by
- References #822: Create a separate WS-client dist Added some more …
- 2:59 PM Ticket #822 (Create a separate WS-client dist) updated by
- (In [3958]) References #822: Create a separate WS-client dist Added …
- 2:31 PM Ticket #823 (Refactor classes in net.sf.basedb.ws.info.*) updated by
- (In [3957]) References #823 Info classes implement …
- 2:31 PM Changeset [3957] by
- References #823 Info classes implement Serializable-interface. Added …
- 2:04 PM Changeset [3956] by
- References #823 The *Info classes are now refactored. The property of …
- 2:04 PM Ticket #823 (Refactor classes in net.sf.basedb.ws.info.*) updated by
- (In [3956]) References #823 The *Info classes are now refactored. The …
- 1:59 PM Changeset [3955] by
- Renamed config to META-INF
- 1:47 PM Ticket #822 (Create a separate WS-client dist) updated by
- (In [3953]) References #822: Create a separate WS-client dist
- 1:37 PM Changeset [3954] by
- References #822: Create a separate WS-client dist
- 1:37 PM Ticket #822 (Create a separate WS-client dist) updated by
- (In [3954]) References #822: Create a separate WS-client dist
- 1:36 PM Changeset [3953] by
- 8:55 AM Ticket #822 (Create a separate WS-client dist) updated by
-
Status changed
- 8:49 AM Ticket #821 (Split up core.aar) closed by
- fixed: (In [3952]) Fixes #821: Split up core.aar
- 8:49 AM Changeset [3952] by
- Fixes #821: Split up core.aar
Nov 12, 2007:
- 3:15 PM Changeset [3951] by
- References #821 and #823. Moved around info.* stuff to prepare for …
- 3:15 PM Tickets #821,823 batch updated by
- (In [3951]) References #821 and #823. Moved around info.* stuff to …
- 3:13 PM Changeset [3950] by
- Fixes #668. Not all icons were put inside (), only those which are in …
- 3:13 PM Ticket #668 (Displaying icons in the text) closed by
- fixed: (In [3950]) Fixes #668. Not all icons were put inside (), only those …
- 2:31 PM Ticket #823 (Refactor classes in net.sf.basedb.ws.info.*) updated by
-
Status changed
- 2:31 PM Ticket #823 (Refactor classes in net.sf.basedb.ws.info.*) created by
- The info classes used in the web services need to be refactored. They …
- 2:23 PM Changeset [3949] by
- Fixes #820
- 2:23 PM Ticket #820 (Trying to delete a plugin that has been used by a job results in ...) closed by
- fixed: (In [3949]) Fixes #820
- 2:18 PM Ticket #822 (Create a separate WS-client dist) created by
- A WS client dist with the following structure: /lib -> …
- 2:09 PM Ticket #821 (Split up core.aar) created by
- As it is now everything in WS are put in one aar-file when building …
- 2:07 PM Ticket #820 (Trying to delete a plugin that has been used by a job results in ...) updated by
-
Owner, Status changed
- 2:04 PM Ticket #492 (Web services) closed by
- fixed: The items in this ticket are done, further development in Base web …
- 12:55 PM Ticket #820 (Trying to delete a plugin that has been used by a job results in ...) created by
- Pb on the trashcan when attempting to remove a plugin definition and …
- 11:50 AM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) closed by
- fixed: All diagrams from the data-layer are now transfered. Core-layer …
- 11:36 AM Changeset [3948] by
- References #746. * Fixes links going from javadoc to docbook. * …
- 11:36 AM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3948]) References #746. * Fixes links going from javadoc to …
- 11:33 AM Changeset [3947] by
- Fixes #819: Last file that needed links to javadoc.
- 11:33 AM Ticket #819 (Link classnames in docbook to their javadoc) closed by
- fixed: (In [3947]) Fixes #819: Last file that needed links to javadoc.
- 10:58 AM Ticket #668 (Displaying icons in the text) updated by
-
Owner, Status changed
- 9:37 AM Changeset [3946] by
- References #819 Described how to use the new attribute with classname …
- 9:37 AM Ticket #819 (Link classnames in docbook to their javadoc) updated by
- (In [3946]) References #819 Described how to use the new attribute …
- 9:08 AM Ticket #819 (Link classnames in docbook to their javadoc) updated by
- (In [3945]) References #819: Links to javadoc can now work from any …
- 9:08 AM Changeset [3945] by
- References #819: Links to javadoc can now work from any subdirectory level.
Nov 9, 2007:
- 4:31 PM Changeset [3944] by
- References #819 The class-tag and interface-tag are now linking to the …
- 4:31 PM Ticket #819 (Link classnames in docbook to their javadoc) updated by
- (In [3944]) References #819 The class-tag and interface-tag are now …
- 3:00 PM Changeset [3943] by
- References #746: Transfer existing UML diagrams to latest MagicDraw …
- 3:00 PM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3943]) References #746: Transfer existing UML diagrams to latest …
- 9:07 AM Ticket #819 (Link classnames in docbook to their javadoc) updated by
-
Status changed
- 9:07 AM Ticket #819 (Link classnames in docbook to their javadoc) created by
- The 'classname' tag in docbook should link the class to the it's …
Nov 8, 2007:
- 3:33 PM Changeset [3942] by
- References #746: Transfer existing UML diagrams to latest MagicDraw …
- 3:33 PM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3942]) References #746: Transfer existing UML diagrams to latest …
- 2:13 PM Changeset [3941] by
- Correct warnings in Javadoc
- 1:05 PM Changeset [3940] by
- Fixes #807 Documentation has been read and some minor changes have …
- 1:05 PM Ticket #807 (Read documentation related to ticket #721: Store data in files instead ...) closed by
- fixed: (In [3940]) Fixes #807 Documentation has been read and some minor …
- 12:08 PM Changeset [3939] by
- References #492: Web services * Try to delete temp files generated …
- 12:08 PM Ticket #492 (Web services) updated by
- (In [3939]) References #492: Web services * Try to delete temp files …
- 9:23 AM Changeset [3938] by
- Fixes #818: JarClassLoader doesn't load classes correctly
- 9:23 AM Ticket #818 (JarClassLoader doesn't load classes correctly) closed by
- fixed: (In [3938]) Fixes #818: JarClassLoader doesn't load classes correctly
- 9:23 AM Ticket #818 (JarClassLoader doesn't load classes correctly) updated by
-
Summary, Owner, Status changed
- 9:00 AM Ticket #818 (JarClassLoader doesn't load classes correctly) created by
- Classes that are larger than a specific number of bytes are not loaded …
- 8:25 AM Changeset [3937] by
- References #492: Web services * Fixed warning message about log4j …
- 8:25 AM Ticket #492 (Web services) updated by
- (In [3937]) References #492: Web services * Fixed warning message …
- 7:54 AM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3936]) References #746: Transfer existing UML diagrams to latest …
- 7:54 AM Changeset [3936] by
- References #746: Transfer existing UML diagrams to latest MagicDraw …
Nov 7, 2007:
- 7:22 PM DownloadPage edited by
- Updating revision number for BASE 2.5.0beta release. (diff)
- 7:16 PM Changeset [3935] by
- Tagging release 2.5.0beta
- 7:16 PM Changeset [3934] by
- Removing, problems uppgrading from 2.4 database schema to the latest …
- 6:01 PM Changeset [3933] by
- Fixes #655
- 6:01 PM Ticket #655 (Plugins -> defintions fails with 'illegal attempt to dereference ...) closed by
- fixed: (In [3933]) Fixes #655
- 5:33 PM Ticket #779 (Improve validation of job parameters in Base1PluginExecuter) closed by
- fixed
- 5:32 PM Changeset [3932] by
- Fixes #817
- 5:32 PM Ticket #817 (Hide deleted job parameters in Base1PluginExecuter) closed by
- fixed: (In [3932]) Fixes #817
- 5:27 PM Ticket #816 (Duplicate parameter) closed by
- invalid
- 5:27 PM Ticket #816 (Duplicate parameter) reopened by
- This is changed. Duplicates are allowed. It is up to the plugin …
- 5:18 PM Ticket #655 (Plugins -> defintions fails with 'illegal attempt to dereference ...) reopened by
- There is still a problem with this. Users that installed the first …
- 4:53 PM Ticket #817 (Hide deleted job parameters in Base1PluginExecuter) updated by
-
Status changed
- 4:52 PM Ticket #817 (Hide deleted job parameters in Base1PluginExecuter) created by
- Job parameters that are marked as deleted should be hidden from the …
- 4:38 PM Changeset [3931] by
- had some trouble with the default value of the annotation parameter
- 4:23 PM DownloadPage edited by
- Releasing 2.5.0beta (diff)
- 4:08 PM Changeset [3930] by
- Tagging release 2.5.0beta
- 4:07 PM Changeset [3929] by
- Fixed typo.
- 3:10 PM Changeset [3928] by
- Removing, problems compiling with Java 1.5
- 3:05 PM Changeset [3927] by
- Fixes issue with compiling under Java 1.5
- 2:41 PM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3926]) References #746: Transfer existing UML diagrams to latest …
- 2:41 PM Changeset [3926] by
- References #746: Transfer existing UML diagrams to latest MagicDraw …
- 1:49 PM Changeset [3925] by
- Tagging release 2.5.0beta
- 1:47 PM Changeset [3924] by
- Preparing release of 2.5.0beta.
- 1:41 PM Ticket #807 (Read documentation related to ticket #721: Store data in files instead ...) updated by
-
Owner, Status changed
- 1:28 PM Changeset [3923] by
- Fixes #816
- 1:28 PM Ticket #816 (Duplicate parameter) closed by
- fixed: (In [3923]) Fixes #816
- 1:21 PM Changeset [3922] by
- set svn to ignore the wsdl folder in base/misc/
- 1:14 PM Ticket #809 (Read Web services documentation) updated by
-
Owner, Status, Description, Component, Priority, Summary changed
- 1:10 PM Changeset [3921] by
- References #809 ready to be read
- 1:10 PM Ticket #809 (Read Web services documentation) updated by
- (In [3921]) References #809 ready to be read
- 12:43 PM Ticket #492 (Web services) updated by
- (In [3920]) References #492 Creates a new OutputStream for each upload …
- 12:43 PM Changeset [3920] by
- References #492 Creates a new OutputStream for each upload and always …
- 11:04 AM Ticket #816 (Duplicate parameter) updated by
-
Status changed
- 11:04 AM Ticket #816 (Duplicate parameter) created by
- The Base1PluginExecuter must check it there is duplicate parameters in …
Nov 6, 2007:
- 4:49 PM Ticket #492 (Web services) updated by
- (In [3919]) References #492 Modified the download methods to eliminate …
- 4:49 PM Changeset [3919] by
- References #492 Modified the download methods to eliminate the …
- 2:54 PM Changeset [3918] by
- References #746: Transfer existing UML diagrams to latest MagicDraw …
- 2:54 PM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3918]) References #746: Transfer existing UML diagrams to latest …
- 2:43 PM Changeset [3917] by
- Fixes #717: Make initdb, updatedb and other scripts accept a username
- 2:43 PM Ticket #717 (Make initdb, updatedb and other scripts accept a username) closed by
- fixed: (In [3917]) Fixes #717: Make initdb, updatedb and other scripts accept …
- 2:39 PM Ticket #717 (Make initdb, updatedb and other scripts accept a username) updated by
-
Status, Owner, Milestone changed
- 1:03 PM Changeset [3916] by
- References #746: Transfer existing UML diagrams to latest MagicDraw …
- 1:03 PM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3916]) References #746: Transfer existing UML diagrams to latest …
- 11:56 AM Changeset [3915] by
- Fixes #795
- 11:56 AM Ticket #795 (Base1PluginExecuter throw PermissionDeniedException: Data cube has ...) closed by
- fixed: (In [3915]) Fixes #795
- 11:09 AM Ticket #795 (Base1PluginExecuter throw PermissionDeniedException: Data cube has ...) updated by
-
Owner, Status changed
- 10:51 AM Changeset [3914] by
- References #809 Documentation updated
- 10:51 AM Ticket #809 (Read Web services documentation) updated by
- (In [3914]) References #809 Documentation updated
- 10:42 AM Changeset [3913] by
- Fixes #778: Add expression to formula
- 10:42 AM Ticket #778 (Add expression to formula) closed by
- fixed: (In [3913]) Fixes #778: Add expression to formula
- 9:49 AM Ticket #778 (Add expression to formula) updated by
-
Status changed
- 9:44 AM Changeset [3912] by
- References #721. Fixes NPE in autodetect file format function when …
- 9:44 AM Ticket #721 (Store data in files instead of in the database) updated by
- (In [3912]) References #721. Fixes NPE in autodetect file format …
- 9:42 AM Changeset [3911] by
- Fixes #811: Wildcard or regular expressions in raw data column …
- 9:42 AM Ticket #811 (Wildcard or regular expressions in raw data column mappings) closed by
- fixed: (In [3911]) Fixes #811: Wildcard or regular expressions in raw data …
- 9:32 AM Ticket #811 (Wildcard or regular expressions in raw data column mappings) updated by
-
Status, Component, Priority, Milestone, Owner, Type changed
- 8:59 AM Changeset [3910] by
- Fixes #814 and #815: Upgrade Postgres JDBC and Hibernate
- 8:59 AM Tickets #814,815 batch updated by
- fixed: (In [3910]) Fixes #814 and #815: Upgrade Postgres JDBC and Hibernate
- 8:57 AM Ticket #721 (Store data in files instead of in the database) updated by
- (In [3909]) References #721: Store data in files instead of in the …
- 8:57 AM Changeset [3909] by
- References #721: Store data in files instead of in the database …
- 8:14 AM Ticket #814 (Update Postgres JDBC driver to latest) updated by
-
Status, Owner changed
- 8:14 AM Ticket #815 (Updgrade to Hibernate 3.2.5) updated by
-
Status, Owner changed
- 7:51 AM Ticket #815 (Updgrade to Hibernate 3.2.5) created by
- It has been around since July so it should be stable. It fixes a …
- 7:48 AM Ticket #814 (Update Postgres JDBC driver to latest) created by
- There is a new version for Java 6 on the Postgres homepage. I have not …
Nov 5, 2007:
- 7:46 PM Ticket #809 (Read Web services documentation) updated by
- (In [3908]) References #809 Updated javadoc
- 7:46 PM Changeset [3908] by
- References #809 Updated javadoc
- 2:58 PM Changeset [3907] by
- References #809. Smaller adjustments.
- 2:58 PM Ticket #809 (Read Web services documentation) updated by
- (In [3907]) References #809. Smaller adjustments.
- 2:24 PM Changeset [3906] by
- Fixes #813: Postgres db-engine ignores schema information in …
- 2:24 PM Ticket #813 (Postgres db-engine ignores schema information in getDropIndexSql() method) closed by
- fixed: (In [3906]) Fixes #813: Postgres db-engine ignores schema information …
- 12:45 PM Ticket #813 (Postgres db-engine ignores schema information in getDropIndexSql() method) created by
- This causes problem when applying the performance fix in 2.4.4 (#796) …
- 12:15 PM Ticket #762 (Provide operators 'In' and 'Not in' when filtering a list) updated by
- I though that this should not be too hard to implement, but I was …
- 11:13 AM Ticket #812 (Wildcard or regular expressions in raw data column mappings) closed by
- duplicate
- 11:06 AM Ticket #812 (Wildcard or regular expressions in raw data column mappings) created by
- Allow wildcard or regular expressions in column mappings when …
- 11:05 AM Ticket #811 (Wildcard or regular expressions in raw data column mappings) created by
- Allow wildcard or regular expressions in column mappings when …
- 10:59 AM Ticket #810 (Implement query options for Include.ANNOTATED and Include.NOT_ANNOTATED) closed by
- fixed: (In [3905]) Fixes #810: Implement query options for Include.ANNOTATED …
- 10:59 AM Changeset [3905] by
- Fixes #810: Implement query options for Include.ANNOTATED and …
- 10:57 AM Ticket #810 (Implement query options for Include.ANNOTATED and Include.NOT_ANNOTATED) updated by
-
Milestone, Owner, Status changed
- 9:31 AM Ticket #764 (Selecting Bioassays in the plot tool.) updated by
- This ticket contains too many features. Features that are independent …
- 9:22 AM Ticket #787 (Add functions for within Bioassays and across Bioassayset in expressions) updated by
- This will be complicated since it is really not possible to mix …
- 9:05 AM Ticket #492 (Web services) updated by
- The BioAssaySetService has even bigger problems with the export …
- 8:51 AM Ticket #492 (Web services) updated by
- Implementation for downloading files has problems: * It is not safe …
Nov 2, 2007:
- 12:01 PM Changeset [3904] by
- References #746:Transfer existing UML diagrams to latest MagicDraw …
- 12:01 PM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3904]) References #746:Transfer existing UML diagrams to latest …
Nov 1, 2007:
- 2:50 PM WikiStart edited by
- Clarified GPL license version. (diff)
- 2:46 PM Changeset [3903] by
- Recommend Postgres users to use at least 8.2
- 1:09 PM Changeset [3902] by
- Added svndigest:ignore to testdata directory
- 11:54 AM Ticket #762 (Provide operators 'In' and 'Not in' when filtering a list) updated by
- I have been thinking a little bit of this problem. My proposal is that …
- 11:33 AM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3901]) References #746: Transfer existing UML diagrams to latest …
- 11:33 AM Changeset [3901] by
- References #746: Transfer existing UML diagrams to latest MagicDraw …
- 11:33 AM Changeset [3900] by
- Fixes #612: Add checks in the core so that unsaved objects are not …
- 11:33 AM Ticket #612 (Add checks in the core so that unsaved objects are not used in queries.) closed by
- fixed: (In [3900]) Fixes #612: Add checks in the core so that unsaved objects …
- 11:17 AM Changeset [3899] by
- References #721: Store data in files instead of in the database …
- 11:17 AM Ticket #721 (Store data in files instead of in the database) updated by
- (In [3899]) References #721: Store data in files instead of in the …
- 9:20 AM WikiStart edited by
- Clarified GPL license version. (diff)
- 8:15 AM Changeset [3898] by
- References #806: Experimental factor values display on Experiment page …
- 8:15 AM Ticket #806 (Experimental factor values display on Experiment page can only display ...) updated by
- (In [3898]) References #806: Experimental factor values display on …
- 8:04 AM Ticket #612 (Add checks in the core so that unsaved objects are not used in queries.) updated by
-
Status changed
Oct 31, 2007:
- 3:59 PM Changeset [3897] by
- References #809 Described available services and describe how to …
- 3:59 PM Ticket #809 (Read Web services documentation) updated by
- (In [3897]) References #809 Described available services and describe …
- 2:12 PM Changeset [3896] by
- References #746: Transfer existing UML diagrams to latest MagicDraw …
- 2:12 PM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3896]) References #746: Transfer existing UML diagrams to latest …
- 1:34 PM DownloadPage edited by
- Releasing 2.4.5 (diff)
- 1:01 PM Changeset [3895] by
- Changes for future release 2.4.6
- 12:52 PM Changeset [3894] by
- Tagging version 2.4.5
- 12:52 PM Milestone BASE 2.4.5 completed
- Revision Log: log:branches/2.4-stable@3856:3893
- 12:51 PM Changeset [3893] by
- Preparing release 2.4.5
Oct 30, 2007:
- 2:38 PM Ticket #729 (./jobagent.sh should accept command `status`) updated by
- > "compliance with other unix startup scripts" Hmmm... what exactly …
- 2:33 PM Ticket #524 (Read "Overview of user documentation" section) closed by
- fixed: (In [3892]) Fixes #524: Read "Overview of user documentation" section
- 2:33 PM Changeset [3892] by
- Fixes #524: Read "Overview of user documentation" section
- 1:58 PM Changeset [3891] by
- References #746: Transfer existing UML diagrams to latest MagicDraw …
- 1:58 PM Ticket #746 (Transfer existing (data-layer) UML diagrams to latest MagicDraw) updated by
- (In [3891]) References #746: Transfer existing UML diagrams to latest …
- 10:49 AM Changeset [3890] by
- Fixes #707: Can't unlink items that have been put in the trashcan
- 10:49 AM Ticket #707 (Can't unlink items that have been put in the trashcan) closed by
- fixed: (In [3890]) Fixes #707: Can't unlink items that have been put in the …
Oct 29, 2007:
- 2:36 PM Ticket #810 (Implement query options for Include.ANNOTATED and Include.NOT_ANNOTATED) updated by
-
Type changed
- 2:08 PM Ticket #810 (Implement query options for Include.ANNOTATED and Include.NOT_ANNOTATED) created by
- The core already defines the two query options, …
- 2:03 PM Ticket #411 (Extending compressed file support and storage) updated by
- (In [3889]) References #411: Extending compressed file support and …
- 2:03 PM Changeset [3889] by
- References #411: Extending compressed file support and storage …
- 2:00 PM Changeset [3888] by
- References #707: Can't unlink items that have been put in the trashcan …
- 2:00 PM Ticket #707 (Can't unlink items that have been put in the trashcan) updated by
- (In [3888]) References #707: Can't unlink items that have been put in …
- 9:45 AM Ticket #797 (Enhance performance for LOWESS and Medin-ratio plug-ins) updated by
- (In [3887]) References #797: Enhance performance for LOWESS and …
- 9:45 AM Changeset [3887] by
- References #797: Enhance performance for LOWESS and Median-ratio …
- 8:36 AM Changeset [3886] by
- Replaced old jar-file and updated classpaths
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