Timeline
Mar 30, 2007:
- 4:32 PM Ticket #528 (Write "File management" section) updated by
- (In [3219]) References #528. More text in File management doc/handling …
- 4:32 PM Changeset [3219] by
- References #528. More text in File management doc/handling files and …
Mar 29, 2007:
- 9:17 AM Ticket #556 (Add a favicon.ico) created by
- It would be nice if BASE had a favicon
Mar 28, 2007:
- 4:52 PM Ticket #528 (Write "File management" section) updated by
- (In [3218]) References #528. More text in File management doc.
- 4:52 PM Changeset [3218] by
- References #528. More text in File management doc.
- 3:54 PM Changeset [3217] by
- removed inconclusive pooling code
Mar 26, 2007:
- 8:59 PM Ticket #555 (Read the short document on how to write the BASE document.) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/developerdoc/write_ …
- 8:41 PM Ticket #554 (Write "Core developer reference.") created by
- http://base.thep.lu.se/chrome/site/doc/html/developerdoc/core_ref/core_ …
- 8:40 PM Ticket #553 (Read "Javadoc" section) created by
- the section should describe how to write Javadoc within BASE. There is …
- 8:40 PM Ticket #552 (Write "API overview" section) created by
- http://base.thep.lu.se/chrome/site/doc/html/developerdoc/api/api_overvi …
- 8:38 PM Ticket #551 (Read "Plugin developer" section) created by
- http://base.thep.lu.se/chrome/site/doc/html/developerdoc/plugin_develop …
- 8:36 PM Ticket #523 (Write "Overview of BASE" section in Overview part) updated by
-
Summary, Description changed
- 8:36 PM Ticket #550 (Write "Overview of BASE" section in Developer documentation part) created by
- http://base.thep.lu.se/chrome/site/doc/html/developerdoc/develop_overvi …
- 8:34 PM Ticket #549 (Read "Administrate users/groups/roles" section.) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/admindoc/user_admin …
- 8:33 PM Ticket #548 (Read "Installing plug-ins" section) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/admindoc/plugin_ins …
- 8:32 PM Ticket #516 (Read "Installation and upgrade" section.) updated by
-
Summary changed
- 8:31 PM Ticket #547 (Read"Import and Export data") created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/import_expo …
- 8:30 PM Ticket #546 (Write "Experiments and analysis" section.) created by
- http://base.thep.lu.se/chrome/site/doc/html/userdoc/analysis/experiment …
- 8:29 PM Ticket #545 (Read "Biomaterials" section.) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/biomaterial …
- 8:28 PM Ticket #544 (Write "Array LIMS" section.) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/array_lims.html
- 8:27 PM Ticket #543 (Read "Software" section.) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/software/so …
- 8:26 PM Ticket #542 (Read "Hardware" section.) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/hardware/ha …
- 6:21 PM Changeset [3216] by
- 5:03 PM Ticket #528 (Write "File management" section) updated by
- (In [3215]) References #528. File management doc.
- 5:03 PM Changeset [3215] by
- References #528. File management doc.
- 4:01 PM Changeset [3214] by
- Using the menu bar section.
- 2:39 PM Changeset [3213] by
- Fixes #541: 'Edit plugin' page doesn't work for Internet Explorer
- 2:39 PM Ticket #541 ('Edit plugin' page doesn't work for Internet Explorer) closed by
- fixed: (In [3213]) Fixes #541: 'Edit plugin' page doesn't work for Internet …
- 2:35 PM Ticket #541 ('Edit plugin' page doesn't work for Internet Explorer) created by
- Internet explorer reportes an error and the display is corrupt.
- 2:30 PM Changeset [3212] by
- constants and sample pooling
- 2:16 PM Changeset [3211] by
- Border and background around warnings in the same way as around notes.
- 1:21 PM Ticket #525 (Read "Using the web client") updated by
-
Status, Owner changed
- 1:19 PM Ticket #520 (SpotBatcher doesn't handle Float.NaN values) closed by
- fixed: (In [3210]) Fixes #520: SpotBatcher doesn't handle Float.NaN values …
- 1:19 PM Changeset [3210] by
- Fixes #520: SpotBatcher doesn't handle Float.NaN values Also changed …
- 1:18 PM Ticket #520 (SpotBatcher doesn't handle Float.NaN values) updated by
-
Summary changed
- 10:54 AM Changeset [3209] by
- default export file names and added annotations
- 9:46 AM Ticket #520 (SpotBatcher doesn't handle Float.NaN values) updated by
- I have now investigated this further. The error only happens if the …
Mar 24, 2007:
- 12:12 PM Ticket #540 (Read "Protocols" section) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/protocols/p …
Mar 23, 2007:
- 4:57 PM Changeset [3208] by
- Added more subsections to file_system.xml. More information to export …
- 3:09 PM Ticket #539 (Change the message when failing with connecting to a DB to be more clear) created by
- As it is now the messages when BASE fails with connecting to a …
- 2:27 PM Ticket #538 (Add tag name to the documentation) closed by
- fixed: (In [3207]) Fixes #538 Add tag name to the documentation
- 2:27 PM Changeset [3207] by
- Fixes #538 Add tag name to the documentation
- 1:51 PM Ticket #536 (Generate helptext import file when running ant dist) updated by
-
Description changed
- 1:36 PM Ticket #538 (Add tag name to the documentation) updated by
-
Status changed
- 1:36 PM Ticket #538 (Add tag name to the documentation) created by
- The tag name should also be included at the same place where revision …
- 1:31 PM Ticket #537 (Import documentation helptexts when installing BASE2) created by
- The helptext-file that is generated from docbook documentation should …
- 1:24 PM Ticket #536 (Generate helptext import file when running ant dist) created by
- The generation of help text from docbook documentation should be made …
- 1:17 PM Ticket #535 (Use docbook's stylesheet in BASE2's helptexts) created by
- The helptexts generated from the documentation(docbook) source need …
- 1:08 PM Ticket #534 (Read "Annotations" section.) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/annotations …
- 1:07 PM Ticket #532 (Read "Jobs" section) updated by
-
Type changed
- 1:07 PM Ticket #533 (Read "Reporters" section.) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/reporters/r …
- 1:07 PM Ticket #532 (Read "Jobs" section) created by
- http://base.thep.lu.se/chrome/site/doc/html/userdoc/jobs/jobs.html
- 12:58 PM Ticket #528 (Write "File management" section) updated by
-
Summary changed
- 11:36 AM Changeset [3206] by
- Fixes #529 Add link to helptext in 'upload new file' pop-up
- 11:36 AM Ticket #529 (Add link to help text in 'upload new file'- pop-up) closed by
- fixed: (In [3206]) Fixes #529 Add link to helptext in 'upload new file' pop-up
- 11:34 AM Ticket #529 (Add link to help text in 'upload new file'- pop-up) updated by
-
Milestone, Status changed
- 9:15 AM Changeset [3205] by
- Fixes #531 Table exporter plugin should have immediate execution permission
- 9:15 AM Ticket #531 (Table exporter plugin should have immediate execution permission) closed by
- fixed: (In [3205]) Fixes #531 Table exporter plugin should have immediate …
- 8:35 AM Ticket #531 (Table exporter plugin should have immediate execution permission) updated by
-
Status, Owner changed
Mar 22, 2007:
- 7:52 PM Ticket #531 (Table exporter plugin should have immediate execution permission) created by
- The installation program doesn't give the …
- 6:20 PM Changeset [3204] by
- fixes to experimental factor values
- 6:07 PM Ticket #530 (Create an 'Archive and Download' button from the 'File and ...) closed by
- duplicate: See #451
- 5:14 PM Ticket #530 (Create an 'Archive and Download' button from the 'File and ...) created by
- Rationale: Help the Process of depositing data to public repositories. …
- 4:00 PM Changeset [3203] by
- References #528 First outline of file system documentation
- 4:00 PM Ticket #528 (Write "File management" section) updated by
- (In [3203]) References #528 First outline of file system documentation
- 2:49 PM Ticket #529 (Add link to help text in 'upload new file'- pop-up) created by
- Currently there is no link to any help text in the pop-up window when …
- 2:28 PM Ticket #528 (Write "File management" section) updated by
-
Owner, Status changed
- 2:21 PM Ticket #515 (Add date of html pages generation to the first page) closed by
- fixed: (In [3202]) Fixes #515 Add date of html pages generation to the first …
- 2:21 PM Changeset [3202] by
- Fixes #515 Add date of html pages generation to the first page. The …
- 10:25 AM Changeset [3201] by
- New changes to fix the shifting of parameter and biomaterialxteristics …
- 8:15 AM Ticket #515 (Add date of html pages generation to the first page) updated by
-
Status, Owner changed
Mar 21, 2007:
- 11:15 PM Ticket #528 (Write "File management" section) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/file_system.html
- 11:14 PM Ticket #527 (Read "Trashcan" section.) created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/trashcan/tr …
- 11:12 PM Ticket #516 (Read "Installation and upgrade" section.) updated by
-
Type, Summary changed
http://base.thep.lu.se/chrome/site/doc/docbook/installation_upgrade.html - 11:11 PM Ticket #526 (Read "Projects and the permission system") created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/project_per …
- 11:09 PM Ticket #525 (Read "Using the web client") created by
- http://base.thep.lu.se/chrome/site/doc/docbook/html/userdoc/webclient/w …
- 11:08 PM Ticket #524 (Read "Overview of user documentation" section) created by
- http://base.thep.lu.se/chrome/site/doc/html/userdoc/about/about.html …
- 11:06 PM Ticket #523 (Write "Overview of BASE" section in Overview part) created by
- http://base.thep.lu.se/chrome/site/doc/html/overviewdoc/overview/base_o …
- 11:05 PM Ticket #522 (Write "Why use BASE" section) created by
- http://base.thep.lu.se/chrome/site/doc/html/overviewdoc/why_base/why_ba …
- 11:02 PM Ticket #521 (Add creation of PDF document of the BASE docbook) created by
- Following items need to be adjusted in the pdf-output(please feel free …
- 4:09 PM Changeset [3200] by
- Some changes in the chapter of import and export of data in the …
- 10:49 AM Changeset [3199] by
- New changes to fix the shifting of parameter columns
Mar 20, 2007:
- 11:15 PM Ticket #520 (SpotBatcher doesn't handle Float.NaN values) updated by
-
Owner, Status, Milestone changed
An empty line is legal and will be imported. If you want to avoid this … - 4:52 PM Ticket #520 (SpotBatcher doesn't handle Float.NaN values) created by
- From Steve Taylor An is generated error when trying to create a New …
- 2:42 PM Changeset [3198] by
- Added an ant task and a xsl stylesheet for helptext-import-file generation.
Mar 19, 2007:
- 6:35 PM Ticket #519 (Copy Set of Annotations from one Template Item to Several Items in one go) created by
- For Annotating 10 Samples with 10 Annotation Type values / samples, …
- 5:06 PM Ticket #518 (Database version in about view) created by
- The sql database version should be displayed in the about view.
- 2:31 PM Changeset [3197] by
- More documentation about the web client
- 9:10 AM Ticket #517 (Read resources section) created by
- We should have a section describing the available resources such as …
- 9:05 AM Ticket #515 (Add date of html pages generation to the first page) updated by
-
Type changed
- 9:05 AM Ticket #516 (Read "Installation and upgrade" section.) updated by
-
Component, Status changed
- 9:05 AM Ticket #516 (Read "Installation and upgrade" section.) created by
- Job agents will be written later.
- 9:00 AM Ticket #515 (Add date of html pages generation to the first page) created by
- I think there should be date displayed on the first page of the …
- 7:49 AM Changeset [3196] by
- Moved docbook images to figures directory.
Mar 16, 2007:
- 6:09 PM Ticket #513 (unable to view samples on "samples" page) closed by
- duplicate: See #509
- 4:34 PM Ticket #512 (Feature request: switch user stays on same page if possible) updated by
- Replying to nicklas: > That was how it worked at first. …
- 1:32 PM Ticket #514 (Change permissions in Power User) updated by
- What is the reason for the change? When the roles were specified the …
- 9:33 AM Ticket #514 (Change permissions in Power User) created by
- I think that the permission to create Reporters should be removed from …
- 7:37 AM Ticket #513 (unable to view samples on "samples" page) created by
- There appears to be a problem with the "samples" page (on …
Mar 15, 2007:
- 5:41 PM Ticket #512 (Feature request: switch user stays on same page if possible) updated by
-
Type changed
That was how it worked at first. Then we got into problems if the new … - 4:49 PM Ticket #512 (Feature request: switch user stays on same page if possible) created by
- I don't know if this would be possible, or desirable in general, but …
Mar 14, 2007:
- 3:43 PM Ticket #511 (MGH Plugins from BASE2 not working) closed by
- fixed: (In [3195]) Fixes #511
- 3:43 PM Changeset [3195] by
- Fixes #511
- 3:11 PM Ticket #511 (MGH Plugins from BASE2 not working) updated by
-
Milestone, Status changed
- 11:32 AM Ticket #511 (MGH Plugins from BASE2 not working) created by
- I am trying to get the MGH plugins working under base2. I thought I …
- 1:43 AM Changeset [3194] by
- Merged log:trunk#3129:3193 into this branch.
- 12:20 AM Ticket #349 (Callback for events to plugins) updated by
-
Milestone changed
- 12:20 AM Ticket #212 (Array slide import plugin) updated by
-
Milestone changed
- 12:19 AM Ticket #23 (Apply button in popup windows?) updated by
-
Milestone changed
- 12:18 AM Milestone BASE 2.2.2 completed
- Bug fixes for the 2.2.1 release.
- 12:18 AM Changeset [3193] by
- Removed obsolete branch 2.2.2 superseded by source:/branches/2.2.3
Mar 13, 2007:
- 4:27 PM Changeset [3192] by
- Changed the DOCTYPE in each xml-file of documentation to use the local …
- 1:34 PM Changeset [3191] by
- Added a helptext element to the documentation-dtd to be used for …
- 11:05 AM Changeset [3190] by
- Merged log:branches/2.2.2#3116:3186 to trunk.
Mar 12, 2007:
- 11:38 PM Ticket #510 (typos on Trac Developer Information) created by
- In paragraph entitled Test data, "We have an core developers..." …
- 10:00 PM DownloadPage edited by
- 2.2.2 released. (diff)
- 9:55 PM Changeset [3189] by
- Bumped version number.
- 9:49 PM Changeset [3188] by
- New bug fix branch for 2.2
- 8:39 PM Changeset [3187] by
- Tagging version 2.2.2
- 8:38 PM Changeset [3186] by
- Bumped version number.
- 8:36 PM Ticket #491 (MeV plugin shows tag 'ExperimentalFactor' for genes in 'Display' menu) closed by
- duplicate: This is not a problem in BASE but rather in the hacked MeV. The issue …
- 8:12 PM Ticket #508 ('We' shouldn't be looking for file formats) closed by
- fixed: (In [3185]) Fixes #508.
- 8:12 PM Changeset [3185] by
- Fixes #508.
- 7:57 PM Ticket #508 ('We' shouldn't be looking for file formats) updated by
-
Owner, Status changed
- 7:57 PM Ticket #491 (MeV plugin shows tag 'ExperimentalFactor' for genes in 'Display' menu) updated by
-
Status changed
- 7:34 PM Changeset [3184] by
- Added missing images for list pages
- 4:54 PM Changeset [3183] by
- More documentation about import and export data
- 4:48 PM Changeset [3182] by
- 4:01 PM Changeset [3181] by
- Added some text about list pages
- 4:01 PM Changeset [3180] by
- Added style to some gui elements. Changed to sans-serif body text.
- 11:11 AM Changeset [3179] by
- Docbook - chunked files now named after their ids.
- 9:54 AM Changeset [3178] by
- added the section from the draft file
- 9:52 AM Ticket #509 (Adding new sample prevents other samples from being viewed) closed by
- invalid: This is a problem with MySQL 5.0.27. See mailing list archive: …
Mar 9, 2007:
- 12:13 PM Ticket #509 (Adding new sample prevents other samples from being viewed) updated by
- Have just noticed we are using MySQL 5.0.27 with BASE 2.2.1, and that …
- 9:39 AM Ticket #509 (Adding new sample prevents other samples from being viewed) created by
- After creating a new Sample in BASE 2.2.1 I got the error Object …
Mar 8, 2007:
- 4:45 PM Changeset [3177] by
- Import data doc
- 2:24 PM Ticket #508 ('We' shouldn't be looking for file formats) updated by
-
Description changed
- 11:27 AM Changeset [3176] by
- added image
- 10:57 AM Changeset [3175] by
- fixed linkes fixed some methodname tags
- 10:32 AM Changeset [3174] by
- Fixed problem with building docbook in windows.
- 10:02 AM Ticket #508 ('We' shouldn't be looking for file formats) created by
- The message when no file format were found look like this: 'We …
- 9:01 AM Changeset [3173] by
- Added a job chapter in the documentation
- 8:51 AM Ticket #505 (where should be were) closed by
- fixed: (In [3172]) Fixes #505 where should be were
- 8:50 AM Changeset [3172] by
- Fixes #505 where should be were
- 8:38 AM Ticket #507 (Path to icons in bioassayset list contains double slash) closed by
- fixed: (In [3171]) Fixes #507 Path to icons in bioassayset list contains …
- 8:38 AM Changeset [3171] by
- Fixes #507 Path to icons in bioassayset list contains double slash
- 8:05 AM Ticket #507 (Path to icons in bioassayset list contains double slash) updated by
-
Status changed
Mar 7, 2007:
- 8:22 PM Ticket #507 (Path to icons in bioassayset list contains double slash) created by
- See the report on the mailing list: …
- 8:00 PM Ticket #506 (Tried to move a file a caused an error) closed by
- invalid: The error message might be a bit cryptic but actually means that there …
- 6:15 PM Changeset [3170] by
- jsp section added and some examples removed
- 3:18 PM Changeset [3169] by
- checked with aspell
- 2:31 PM Ticket #506 (Tried to move a file a caused an error) created by
- Tried to move a file from Administrator's hom account to template/raw …
- 12:46 PM Changeset [3168] by
- text for InteractivePlugin.getRequestInformation added
Mar 6, 2007:
- 5:37 PM Changeset [3167] by
- 5:32 PM Changeset [3166] by
- added text to section interfaces/plugin
- 4:48 PM Changeset [3165] by
- Introduction to import and export data - documentation
- 4:04 PM Changeset [3164] by
- The first section in a chapter is now placed in a seperated file when …
- 1:32 PM Changeset [3163] by
- First text written
- 11:25 AM Changeset [3162] by
- Added copyright text to userdoc/index.xml and some more changes to TOC …
- 8:45 AM Changeset [3161] by
- Added "id" attribute to each part and chapter in the docbook book. …
Mar 5, 2007:
- 4:47 PM Changeset [3160] by
- Added the files for developer documentation and set the parser to …
- 4:24 PM Changeset [3159] by
- Changed the way the "chapter" files are included in the documentation …
- 3:09 PM Changeset [3158] by
- Created files for admin documentation
- 2:43 PM Changeset [3157] by
- Created files for user- and overview documentation
- 2:12 PM Ticket #505 (where should be were) updated by
-
Owner, Milestone, Description changed
Should be simple to fix. Search all list_*.jsp pages and replace. - 1:47 PM Changeset [3156] by
- Added info about how to build the docbook documentation. Clean up …
- 1:38 PM Changeset [3155] by
- Ignore generated docbook documentation
- 1:35 PM Changeset [3154] by
- A couple of more new lines to the contents of documentation
- 1:34 PM Changeset [3153] by
- Added docbook DTD:s and stylesheets
Mar 1, 2007:
- 2:48 PM Ticket #505 (where should be were) created by
- 'Where' is displayed when 'were' is expected For example * No …
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