Timeline
Sep 9, 2006:
- 11:09 PM Ticket #362 (Stack trace is output to catalina.out when it shouldn't) created by
- The below exception is thrown when ones tries to run an analysis …
- 3:48 PM Changeset [2633] by
- Added link to http://base.thep.lu.se
- 2:07 AM Ticket #361 (Export of bioassaysets) created by
- A plug-in to export bioassay data is needed as reported at the …
Sep 8, 2006:
- 4:06 PM Changeset [2632] by
- References #351: External job server usage Started to implement the …
- 4:06 PM Ticket #351 (External job server usage) updated by
- (In [2632]) References #351: External job server usage Started to …
- 12:17 PM Ticket #351 (External job server usage) updated by
- (In [2631]) References #351: External job server usage Update web …
- 12:17 PM Changeset [2631] by
- References #351: External job server usage Update web pages for …
- 9:27 AM Ticket #360 (Make subsections on view pages hideable) created by
- Some view pages for items have lots of information on them and they …
- 9:21 AM Changeset [2630] by
- Fixed compilatio errors in test program after change to JobAgent
- 9:17 AM Changeset [2629] by
- References #351: External job server usage Added web pages for …
Sep 7, 2006:
- 2:23 PM Changeset [2628] by
- Added svndigest:ignore property on test data files.
- 11:20 AM Ticket #351 (External job server usage) updated by
- (In [2627]) References #351: External job server usage Added data …
- 11:20 AM Changeset [2627] by
- References #351: External job server usage Added data layer class, …
- 11:07 AM Changeset [2626] by
- Updated UML-diagram with entity value for plugin permissions.
- 9:36 AM Ticket #359 (Sorting on mulitple columns in web tables) created by
- Sometimes you want to sort the results using multiple columns. For …
Sep 6, 2006:
- 4:09 PM Changeset [2625] by
- Added JobAgent to UML diagram
Sep 5, 2006:
- 5:02 PM Changeset [2624] by
- Updated the documentation with information about plugin permissions.
- 1:04 PM DeveloperInformation edited by
- Changed link for development plan to roadmap (diff)
- 1:01 PM Changeset [2623] by
- Removed links to the very old development status pages. Fixed redirect …
- 12:47 PM Ticket #351 (External job server usage) updated by
-
Status changed
- 12:01 PM Ticket #332 (Fix bugs in migration program) updated by
- (In [2622]) References #332: Fix bugs in migration program This …
- 12:01 PM Changeset [2622] by
- References #332: Fix bugs in migration program This should fix most …
- 11:20 AM Ticket #358 (Better info from Migration tool) updated by
-
Component changed
- 11:20 AM Ticket #358 (Better info from Migration tool) created by
- The output of the migration tool is somewhat sporadic and not very …
Sep 4, 2006:
- 4:36 PM Ticket #220 (Plugin permissions) updated by
-
Status changed
- 3:49 PM Ticket #294 (Performance testing: Plugin-in execution time) updated by
-
Owner changed
- 3:49 PM Ticket #220 (Plugin permissions) updated by
-
Owner changed
- 3:47 PM Ticket #336 (Install common file formats with main installation) updated by
-
Owner changed
- 3:47 PM Ticket #335 (Plugins for importing/exporting plugin configurations) updated by
-
Owner changed
- 3:47 PM Ticket #344 (Display extra values in data tables and other places) updated by
-
Owner changed
- 11:18 AM Ticket #332 (Fix bugs in migration program) updated by
- Also:: Protocol is not connected with Hybridization
Sep 1, 2006:
- 4:49 PM Changeset [2621] by
- Merge file added
- 4:39 PM Ticket #332 (Fix bugs in migration program) updated by
- * One more issue found. Original and remaining quantity for extracts …
- 4:31 PM Tickets #355,356,357 batch updated by
- fixed: (In [2620]) fixes #355 #356 #357
- 4:31 PM Changeset [2620] by
- fixes #355 #356 #357
- 4:24 PM Ticket #357 (Importing datamatrix) created by
- The Base1PluginExecuter cant import a matrix base file
- 4:23 PM Ticket #356 (Nullpointer in Base1PluginExecuter) created by
- When exporting a hidden string the Base1PluginExecuter is throwing a …
- 4:21 PM Ticket #355 (Log2ratio is calculated wrong in base1executer) created by
- The log2ratio is wrong when exporting data in Base1PluginExecuter
- 3:44 PM Changeset [2619] by
- Removed RC2.
- 2:04 PM Ticket #10 (Analysis: Hierarchical clustering) updated by
-
Milestone changed
- 2:00 PM Ticket #332 (Fix bugs in migration program) updated by
-
Milestone changed
- 1:21 PM Ticket #332 (Fix bugs in migration program) updated by
-
Summary changed
Here are some more issues that I have found: * BASE 1 permissions …
Aug 31, 2006:
- 2:32 PM Milestone BASE 2.0 completed
- This milestone includes * Affymetrix support (delayed from RC2, will …
- 2:32 PM WikiStart edited by
- 2.0 released. (diff)
- 2:23 PM DownloadPage edited by
- (diff)
- 2:21 PM DownloadPage edited by
- (diff)
- 1:38 PM Changeset [2618] by
- Create bugfix branch for 2.0
- 1:37 PM Changeset [2617] by
- Releasing 2.0
- 1:23 PM Changeset [2616] by
- Oracle JDBC driver is not needed
- 1:17 PM Changeset [2615] by
- Added info about debug parameter for the migration.
- 1:13 PM Ticket #332 (Fix bugs in migration program) updated by
- (In [2614]) References #332: Base 1 ID lookup is unstable Should fix …
- 1:13 PM Changeset [2614] by
- References #332: Base 1 ID lookup is unstable Should fix the original …
- 1:10 PM Changeset [2613] by
- Fixes incorrect plate mappings installed by previous releases.
- 11:32 AM Ticket #354 (Copy transformation) updated by
-
Status, Owner changed
Aug 30, 2006:
- 10:01 PM Changeset [2612] by
- Fixed batch files for running test programs in windows.
- 4:35 PM Ticket #264 (Base1 plug-in executer enhancements) closed by
- fixed
- 4:34 PM Changeset [2611] by
- Fixex #264
- 4:23 PM Changeset [2610] by
- Filled up some javaDocs
- 4:06 PM Changeset [2609] by
- Added people to credits list.
- 1:48 PM Changeset [2608] by
- Added information about the broken migration tool.
- 10:23 AM Changeset [2607] by
- Fixed NullPointerException in configure() method
- 8:03 AM Changeset [2606] by
- Removed non-existing email address from plugins.
- 7:57 AM Changeset [2605] by
- Changed text about Type.ITEM to not talk about lists any more.
Aug 29, 2006:
- 3:59 PM Changeset [2604] by
- Removed category duplication
- 2:59 PM Changeset [2603] by
- added some html.javaScriptEncode lines
- 2:11 PM Ticket #354 (Copy transformation) updated by
-
Description changed
- 1:41 PM Ticket #354 (Copy transformation) created by
- A copy action for transformations. Create a new transformation from …
- 12:12 PM Changeset [2602] by
- Removed category duplication
- 11:32 AM Changeset [2601] by
- Updated Javadoc and added missing imports for javadoc ref.
- 10:01 AM Ticket #352 (Connect parts of the TM4 software suite to BASE) updated by
-
Owner, Component changed
- 10:01 AM Ticket #353 (Create connectivity from R/BioConductor to BASE) updated by
-
Component changed
- 10:00 AM Ticket #353 (Create connectivity from R/BioConductor to BASE) created by
- As a part of our effort in an EU project http://www.eu-acgt.org we …
- 9:58 AM Ticket #352 (Connect parts of the TM4 software suite to BASE) updated by
-
Type changed
- 9:58 AM Ticket #352 (Connect parts of the TM4 software suite to BASE) created by
- We are going to connect parts of the TM4 suite (http://www.tm4.org) to …
- 8:20 AM Ticket #332 (Fix bugs in migration program) updated by
-
Status changed
- 8:17 AM Ticket #340 (Experiment validation tool) updated by
-
Priority changed
- 8:16 AM Ticket #311 (Allow parsing of numbers with different locale settings) updated by
-
Priority changed
- 8:16 AM Ticket #317 (Display and enter dates in different formats) updated by
-
Priority changed
- 8:15 AM Ticket #333 (Administrator documentation) updated by
-
Priority changed
- 8:15 AM Ticket #337 (Tab2Mage export plugin) updated by
-
Priority changed
- 8:06 AM Ticket #169 (Use formulas for creating extra values) updated by
-
Priority changed
- 8:05 AM Ticket #313 (Error handling in import plugins) updated by
-
Priority changed
- 8:04 AM Ticket #349 (Callback for events to plugins) updated by
-
Priority changed
- 8:04 AM Ticket #351 (External job server usage) updated by
-
Type changed
- 8:03 AM Ticket #318 (Plugin configuration values are not stored for a job) updated by
-
Priority changed
Aug 28, 2006:
- 4:06 PM Ticket #332 (Fix bugs in migration program) updated by
-
Version changed
- 4:06 PM Ticket #10 (Analysis: Hierarchical clustering) updated by
-
Version changed
- 3:27 PM Ticket #332 (Fix bugs in migration program) updated by
-
Priority changed
- 3:27 PM Ticket #10 (Analysis: Hierarchical clustering) updated by
-
Priority changed
- 3:26 PM Ticket #351 (External job server usage) created by
- Add possibility to run jobs in other JVMs that the server.
- 3:24 PM Ticket #350 (Switch to another user functionality) updated by
-
Milestone changed
- 3:23 PM Ticket #349 (Callback for events to plugins) updated by
-
Milestone changed
- 3:22 PM Ticket #348 (Take ownership of items) updated by
-
Milestone changed
- 3:21 PM Ticket #347 (Give administrators access to other users trashcans) updated by
-
Milestone changed
- 3:21 PM Ticket #346 (If an item is used, get information about the items that are using it) updated by
-
Milestone changed
- 3:21 PM Ticket #345 (List all items owned by a user) updated by
-
Milestone changed
- 3:21 PM Ticket #344 (Display extra values in data tables and other places) updated by
-
Milestone changed
- 3:20 PM Ticket #343 (Plot tool should be able to use other annotations than bioassay) updated by
-
Milestone changed
- 3:20 PM Ticket #342 (Plot tool should be able to use extra values) updated by
-
Milestone changed
- 3:19 PM Ticket #340 (Experiment validation tool) updated by
-
Milestone changed
- 3:18 PM Ticket #339 (Protocol parameters) updated by
-
Milestone changed
- 3:17 PM Ticket #337 (Tab2Mage export plugin) updated by
-
Milestone changed
- 3:17 PM Ticket #336 (Install common file formats with main installation) updated by
-
Milestone changed
- 3:16 PM Ticket #335 (Plugins for importing/exporting plugin configurations) updated by
-
Milestone changed
- 3:16 PM Ticket #334 (Project default items) updated by
-
Milestone changed
- 3:15 PM Ticket #333 (Administrator documentation) updated by
-
Milestone changed
- 3:14 PM Ticket #332 (Fix bugs in migration program) updated by
-
Milestone changed
- 3:10 PM Ticket #326 (Mass annotation plug-in) updated by
-
Version, Milestone changed
- 3:09 PM Ticket #318 (Plugin configuration values are not stored for a job) updated by
-
Version, Milestone changed
- 3:08 PM Ticket #317 (Display and enter dates in different formats) updated by
-
Milestone, Version changed
- 3:07 PM Ticket #316 (Add support for color coding in data tables) updated by
-
Version, Milestone changed
- 3:07 PM Ticket #313 (Error handling in import plugins) updated by
-
Milestone changed
- 3:07 PM Ticket #312 (ReporterType import) updated by
-
Milestone changed
- 3:06 PM Ticket #311 (Allow parsing of numbers with different locale settings) updated by
-
Version, Milestone changed
- 3:05 PM Ticket #308 (Firefox unresponsive script warning when uploading files) closed by
- worksforme
- 3:04 PM Ticket #301 (Better GUI for defining file formats) updated by
-
Version, Milestone changed
- 3:04 PM Ticket #298 (Add administrator page for viewing disk usage statistics) updated by
-
Version, Milestone changed
- 3:04 PM Ticket #295 (Filter on selected bioassays) updated by
-
Milestone changed
- 3:04 PM Ticket #294 (Performance testing: Plugin-in execution time) updated by
-
Milestone changed
- 3:03 PM Ticket #293 (allow queuing of uploads) updated by
-
Version, Milestone changed
- 3:01 PM Ticket #262 (Overview of an experiment) updated by
-
Version, Milestone changed
- 3:00 PM Ticket #257 (Fix the Jep.nodeToExpression method) updated by
-
Version, Milestone changed
- 3:00 PM Ticket #252 (Make the trashcan smarter when deleting items) updated by
-
Version, Milestone changed
- 2:59 PM Ticket #241 (Files that have been used for parameters to a job can't be deleted properly) updated by
-
Milestone changed
- 2:57 PM Ticket #220 (Plugin permissions) updated by
-
Milestone changed
- 2:55 PM Ticket #212 (Array slide import plugin) updated by
-
Version, Milestone changed
- 2:52 PM Ticket #201 (Experiment directory) updated by
-
Milestone changed
- 2:51 PM Ticket #189 (Allow export plugins to send download immediately to client) updated by
-
Milestone changed
- 2:51 PM Ticket #172 (Add externalId property to annotation type) updated by
-
Milestone changed
- 2:50 PM Ticket #169 (Use formulas for creating extra values) updated by
-
Milestone changed
- 2:50 PM Ticket #153 (More progress from importer plug-ins) updated by
-
Milestone changed
- 2:49 PM Ticket #146 (Add help text to the web gui) updated by
-
Milestone changed
- 2:49 PM Ticket #140 (Write documentation: 5e) Secondary file storage) updated by
-
Milestone changed
- 2:49 PM Ticket #138 (Write documentation: 5c) Authentication plug-ins) updated by
-
Milestone changed
- 2:48 PM Ticket #108 (Logging the change history of an item) updated by
-
Milestone changed
- 2:46 PM Ticket #10 (Analysis: Hierarchical clustering) updated by
-
Milestone changed
- 2:05 PM Ticket #10 (Analysis: Hierarchical clustering) updated by
-
Milestone changed
- 1:56 PM Changeset [2600] by
- Updated About and exception dialog with jdbc driver version, java …
- 1:06 PM Ticket #350 (Switch to another user functionality) created by
- For users with the "Act as another user" permission it should be …
- 1:04 PM Changeset [2599] by
- Delete, Restore, Share and Export buttons now works in popup windows …
- 12:58 PM Ticket #349 (Callback for events to plugins) created by
- Make it possible to catch onChange event for plugin parameters and …
- 11:44 AM Ticket #347 (Give administrators access to other users trashcans) updated by
- When the root user deletes an item owner by another user, it ends up …
- 11:42 AM Ticket #348 (Take ownership of items) created by
- Implement interface for taking the ownership of an item, given that …
- 11:40 AM Ticket #347 (Give administrators access to other users trashcans) created by
- 11:39 AM Ticket #346 (If an item is used, get information about the items that are using it) created by
- A used item can't be deleted and it is annoying to not know what is …
- 11:37 AM Ticket #345 (List all items owned by a user) created by
- 11:18 AM Ticket #344 (Display extra values in data tables and other places) created by
- In the current implementation it is not possible to display extra …
- 11:15 AM Ticket #343 (Plot tool should be able to use other annotations than bioassay) created by
- In the current implementation you can only annotate the plots with the …
- 11:13 AM Ticket #342 (Plot tool should be able to use extra values) created by
- The current implementation cannot plot extra values.
- 10:57 AM Ticket #341 (Raw data type conversion plugin) created by
- Develop one or more plugins that can convert raw data of one type to …
- 10:56 AM Ticket #262 (Overview of an experiment) updated by
-
Milestone, Description changed
- 10:55 AM Ticket #340 (Experiment validation tool) created by
- The core is very loose when it comes to checking the structure of …
- 10:50 AM Ticket #339 (Protocol parameters) created by
- Make it possible to specify parameters for a protocol. Then, when that …
- 10:49 AM Ticket #338 (Tab2Mage import plugin) created by
- Create a plugin that can import Tab2Mage files.
- 10:48 AM Ticket #337 (Tab2Mage export plugin) created by
- Create a plugin that can export an experiment in Tab2Mage format
- 10:47 AM Ticket #336 (Install common file formats with main installation) created by
- Plugin configurations for some common file formats could probably be …
- 10:46 AM Ticket #335 (Plugins for importing/exporting plugin configurations) created by
- Configuring a plugin is a tedious task that sometimes requires …
- 10:44 AM Ticket #334 (Project default items) created by
- Make is possible to specify default items (protocols, scanner, …
- 10:42 AM Ticket #333 (Administrator documentation) created by
- Write documentation for the Base 2 server administrator. Base 2 has a …
- 10:37 AM Ticket #300 (Fields in Properties display mis-aligned) closed by
- fixed: Has probably been fixed by one of the style sheet changes some time ago.
- 9:09 AM Ticket #332 (Fix bugs in migration program) created by
- The migration tool is not stable if it encounters a Base 1 …
- 9:04 AM Ticket #331 (Remember the last used item when creating new items) closed by
- fixed: (In [2598]) Fixes #331: Remember the last used item when creating new items
- 9:04 AM Changeset [2598] by
- Fixes #331: Remember the last used item when creating new items
Aug 25, 2006:
- 4:07 PM Ticket #331 (Remember the last used item when creating new items) updated by
- (In [2597]) References #331: Remember the last used item when creating …
- 4:07 PM Changeset [2597] by
- References #331: Remember the last used item when creating new items …
- 1:15 PM Ticket #331 (Remember the last used item when creating new items) updated by
- (In [2596]) References #331: Remember the last used item when creating …
- 1:15 PM Changeset [2596] by
- References #331: Remember the last used item when creating new items …
- 12:45 PM Changeset [2595] by
Aug 24, 2006:
- 4:33 PM Changeset [2594] by
- Correct column names in plot types table, chapter 6, §7
- 4:24 PM Changeset [2593] by
- Added a missing configuration value for the Raw data importer in the …
- 3:55 PM Ticket #331 (Remember the last used item when creating new items) updated by
-
Milestone, Owner, Status changed
- 3:47 PM Changeset [2592] by
- Made toolbar visible in popupwindows.
- 3:42 PM Changeset [2591] by
- :Merged trunk changes r2577:2590 into dominic_annotations
- 2:04 PM Changeset [2590] by
- Create hybridzations from multiple labeled extracts
- 1:01 PM Changeset [2589] by
- Fixed incorrect link when write permission is missing.
- 12:54 PM Ticket #330 (Make it possible to inherit annotations for new items) closed by
- fixed: (In [2588]) Fixes #330: Make it possible to inherit annotations for …
- 12:54 PM Changeset [2588] by
- Fixes #330: Make it possible to inherit annotations for new items
- 12:53 PM Changeset [2587] by
- Plates now save the annotations
- 12:52 PM Changeset [2586] by
- Get all annotatable parents
- 10:47 AM Changeset [2585] by
- the category column removed
- 9:58 AM Changeset [2584] by
- References #330: Make it possible to inherit annotations for new items …
- 9:58 AM Ticket #330 (Make it possible to inherit annotations for new items) updated by
- (In [2584]) References #330: Make it possible to inherit annotations …
- 9:20 AM Changeset [2583] by
- Updated documentation about where to find test data
- 9:06 AM Changeset [2582] by
- 8:49 AM Changeset [2581] by
- Replaced fixed array with map. Use printStackTrace() method to always …
- 7:57 AM Changeset [2580] by
- Changed yellow icon background to grey
Aug 23, 2006:
- 4:10 PM DeveloperInformation edited by
- Added test data repo. (diff)
- 3:47 PM Ticket #330 (Make it possible to inherit annotations for new items) updated by
-
Status, Milestone changed
- 3:27 PM Ticket #329 (Auto-focus on input field when selecting annotation or plugin parameter) closed by
- fixed: (In [2579]) Fixes #329: Auto-focus on input field when selecting …
- 3:27 PM Changeset [2579] by
- Fixes #329: Auto-focus on input field when selecting annotation or …
- 3:20 PM Ticket #329 (Auto-focus on input field when selecting annotation or plugin parameter) updated by
-
Status changed
- 2:13 PM Ticket #331 (Remember the last used item when creating new items) created by
- For example, when you create a new Raw bioassay you may select "Scan", …
- 1:57 PM Ticket #330 (Make it possible to inherit annotations for new items) created by
- The current implemenation requires that the item is saved before it …
- 1:32 PM Ticket #329 (Auto-focus on input field when selecting annotation or plugin parameter) created by
- When you click on a plugin parameter or annotation in the left list an …
- 12:49 PM Changeset [2578] by
- :Fixed compilation errors after merge
- 12:34 PM Changeset [2577] by
- :Merged trunk changes r2343:2576 into dominic_annotations
- 10:51 AM Changeset [2576] by
- Test formulas before experiments since formulas are used in the …
- 10:36 AM Changeset [2575] by
- Copy function for plugin configurations now copy the parameters also.
- 8:58 AM Changeset [2574] by
- Don't show "Configure plugin" action if the logged in user doesn't …
- 8:54 AM Changeset [2573] by
- Fixes #328: Enable clicks on the enumeration option when annotating …
- 8:54 AM Ticket #328 (Enable clicks on the enumeration option when annotating items) closed by
- fixed: (In [2573]) Fixes #328: Enable clicks on the enumeration option when …
Aug 22, 2006:
- 3:39 PM Ticket #328 (Enable clicks on the enumeration option when annotating items) updated by
-
Status changed
- 2:52 PM Ticket #327 (Not all users are listed as members in a group) closed by
- fixed: (In [2572]) Fixes #327: Not all users are listed as members in a group
- 2:52 PM Changeset [2572] by
- Fixes #327: Not all users are listed as members in a group
- 2:48 PM Ticket #327 (Not all users are listed as members in a group) updated by
-
Status changed
- 2:41 PM Changeset [2571] by
- Original quantities are empty by default. Event dates default to …
- 2:40 PM Changeset [2570] by
- Removed list of labeled extracts from labels view since it is …
- 2:35 PM Changeset [2569] by
- Use dye-swap labeled extracts for dye-swap hybridizations
- 2:22 PM Tickets #221,222 batch updated by
- (In [2568]) Fixes #221: Create enhanced test procedure. References …
- 2:22 PM Changeset [2568] by
- Fixes #221: Create enhanced test procedure. References #222: Automated …
- 1:42 PM Ticket #259 (A job's progress doesn't get upadated when a job is executing in ...) closed by
- fixed: (In [2567]) Fixes #259: A job's progress doesn't get upadated when a …
- 1:42 PM Changeset [2567] by
- Fixes #259: A job's progress doesn't get upadated when a job is …
- 1:41 PM Ticket #259 (A job's progress doesn't get upadated when a job is executing in ...) updated by
-
Status, Milestone changed
- 1:13 PM Changeset [2566] by
- Fixed an unhandled exception when trying to read the quantity of an …
- 1:10 PM Changeset [2565] by
- Pad plate names with 0 instead of space since Postgres ignores spaces …
- 1:08 PM Changeset [2564] by
- Added Application.start(boolean) method that allows an application to …
- 12:59 PM Changeset [2563] by
- Break after ten iterations to avoid endless loops
- 11:06 AM Changeset [2562] by
- Fixed an unhandled exception when trying to read the quantity of an …
- 10:43 AM Changeset [2561] by
- Made some optimizations to the Lowess normalization. Arrays get a size …
- 8:49 AM Changeset [2560] by
- Removed duplicated formulas
- 8:46 AM Changeset [2559] by
- Dates are now shown with time information as well
- 8:42 AM Changeset [2558] by
- No publication date by default
Aug 21, 2006:
- 3:04 PM Changeset [2557] by
- Fixes #325 Corrupt page when viewing an biomaterial event
- 3:04 PM Ticket #325 (Corrupt page when viewing an biomaterial event) closed by
- fixed: (In [2557]) Fixes #325 Corrupt page when viewing an biomaterial event
- 2:43 PM Changeset [2556] by
- Display label of each labeled extract
- 2:26 PM Ticket #328 (Enable clicks on the enumeration option when annotating items) created by
- When the web interface displays radio buttons or checkboxes for …
- 2:13 PM Changeset [2555] by
- Fixed ArrayDesignPlate.getQuery() method to create a query that …
- 1:44 PM Changeset [2554] by
- Fixed incorrect message when no plates are connected with an array design.
- 1:43 PM Changeset [2553] by
- Removed "New plate" functionality since plates are usually imported …
- 1:41 PM Changeset [2552] by
- Display times with seconds.
- 1:05 PM Ticket #327 (Not all users are listed as members in a group) created by
- Users that have been assigned a quota group are not listed as members …
- 12:14 PM Ticket #326 (Mass annotation plug-in) created by
- There should be a plugin for doing anotation of item from a file. The …
Aug 18, 2006:
- 5:51 PM Changeset [2551] by
- corrected a nullpointer in the reader
- 5:43 PM Changeset [2550] by
- made some major design changes looks a little bit better now
- 4:33 PM Changeset [2549] by
- Creat a copy of an existing plugin configuration is added to the web-gui.
Aug 17, 2006:
- 3:43 PM Ticket #222 (Automated test program suite for enhanced test procedure) closed by
- fixed: (In [2548]) Fixes #222: Automated test program suite for enhanced test …
- 3:43 PM Changeset [2548] by
- Fixes #222: Automated test program suite for enhanced test procedure
- 2:26 PM Ticket #264 (Base1 plug-in executer enhancements) updated by
- Annotations are now exported
- 2:23 PM Changeset [2547] by
- exports annotations
- 2:23 PM Changeset [2546] by
- made getIdFromPath public
- 11:49 AM Changeset [2545] by
- Now handles the case with a null reporter correctly
- 11:48 AM Changeset [2544] by
- Fixed index problem when linking to plates/wells (use 0-based instead …
- 11:47 AM Changeset [2543] by
- Let superclass handle error reporting
- 11:47 AM Changeset [2542] by
- Fixed equals() method to behave as documented
- 11:45 AM Changeset [2541] by
- Better error reportering which include line number in most error messages
- 11:44 AM Changeset [2540] by
- Added line number info to FlatFileParser.Line object
- 11:09 AM Changeset [2539] by
- * FlatFileParse now ignores comment lines within the data section. * …
- 11:08 AM Changeset [2538] by
- Fixed bad link on Run plugin button
- 10:53 AM Ticket #325 (Corrupt page when viewing an biomaterial event) updated by
-
Status changed
- 10:39 AM Changeset [2537] by
- Fixes #324: Filter feature on block results in error message
- 10:39 AM Ticket #324 (Filter feature on block results in error message) closed by
- fixed: (In [2537]) Fixes #324: Filter feature on block results in error message
- 9:13 AM Ticket #325 (Corrupt page when viewing an biomaterial event) created by
- Logg in with user permissions. View a sample that's shared to you. Go …
Aug 16, 2006:
- 4:02 PM Ticket #324 (Filter feature on block results in error message) created by
- could not resolve property: block of: …
- 12:05 PM Changeset [2536] by
- Fixes #197: Submenu onClick
- 12:05 PM Ticket #197 (Submenu onClick) closed by
- fixed: (In [2536]) Fixes #197: Submenu onClick
- 12:04 PM Ticket #197 (Submenu onClick) updated by
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Milestone changed
- 11:49 AM Ticket #319 (Spot images shown in experiment explorer do not seem to correspond to ...) closed by
- fixed: (In [2535]) Fixes #319: Spot images shown in experiment explorer do …
- 11:49 AM Changeset [2535] by
- Fixes #319: Spot images shown in experiment explorer do not seem to …
- 11:05 AM Ticket #319 (Spot images shown in experiment explorer do not seem to correspond to ...) updated by
-
Status changed
- 11:01 AM Changeset [2534] by
- Fixes problem with disappearing buttons and page width in Plot tool.
- 9:46 AM Changeset [2533] by
- Fixes #323 Corrupt link in Samples->'The sample'->Event
- 9:46 AM Ticket #323 (Corrupt link in Samples->'The sample'->Event) closed by
- fixed: (In [2533]) Fixes #323 Corrupt link in Samples->'The sample'->Event
- 9:27 AM Changeset [2532] by
- Fixed link to bioassayset tools when viewing a transformation.
- 9:15 AM Changeset [2531] by
- Experiment explorer can now handle the case with zero matching reporters
- 9:04 AM Changeset [2530] by
- Added caching for AnnotationTypeCategoryData as specified
- 9:03 AM Ticket #323 (Corrupt link in Samples->'The sample'->Event) updated by
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Status changed
- 9:03 AM Ticket #323 (Corrupt link in Samples->'The sample'->Event) created by
- Logged in as a normal user. Link to protocol on view_event_page. …
- 9:02 AM Ticket #131 (Write documentation 4a) Schematic overview of BASE) closed by
- fixed: (In [2529]) Fixes #131: Write documentation 4a) Schematic overview of BASE
- 9:02 AM Changeset [2529] by
- Fixes #131: Write documentation 4a) Schematic overview of BASE
- 9:02 AM Ticket #131 (Write documentation 4a) Schematic overview of BASE) updated by
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Summary changed
Aug 15, 2006:
- 10:19 PM Ticket #322 (Wrong message when not all item could be restored) closed by
- fixed: (In [2528]) Fixes #322 Wrong message when not all item could be restored
- 10:19 PM Changeset [2528] by
- Fixes #322 Wrong message when not all item could be restored
- 4:49 PM Changeset [2527] by
- missed a null check
- 4:35 PM Ticket #305 (delete recusively) closed by
- fixed: (In [2526]) Fixes #305 Delete recursively. Implemented for …
- 4:35 PM Changeset [2526] by
- Fixes #305 Delete recursively. Implemented for Directories, …
- 4:12 PM Ticket #322 (Wrong message when not all item could be restored) created by
- If the user doesn't have permission to restore an item the dialog …
- 3:47 PM Changeset [2525] by
- References #131: Write documentation 3a) Schematic overview of BASE …
- 3:47 PM Ticket #131 (Write documentation 4a) Schematic overview of BASE) updated by
- (In [2525]) References #131: Write documentation 3a) Schematic …
- 3:41 PM Changeset [2524] by
- Compile JSP pages with more memeory since we got an OutOfMemoryError …
- 3:40 PM Ticket #321 (Error on filter page: NoSuchMethod) closed by
- fixed: (In [2523]) Fixes #321: Error on filter page: NoSuchMethod And two …
- 3:40 PM Changeset [2523] by
- Fixes #321: Error on filter page: NoSuchMethod And two other …
- 2:52 PM Ticket #321 (Error on filter page: NoSuchMethod) created by
- When I try the ' java.lang.NoSuchMethodError on page …
- 1:17 PM Ticket #320 (Nullpointer in experiment explorer) closed by
- fixed: (In [2522]) Fixes #320
- 1:17 PM Changeset [2522] by
- Fixes #320
- 1:07 PM Ticket #320 (Nullpointer in experiment explorer) updated by
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Owner, Component changed
- 12:04 PM Ticket #320 (Nullpointer in experiment explorer) created by
- When choosing annotation. Base version 2.0 (build #2517; schema …
- 11:21 AM Changeset [2521] by
- supports annotation parameter
- 8:39 AM Ticket #131 (Write documentation 4a) Schematic overview of BASE) updated by
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Status changed
- 8:32 AM Changeset [2520] by
- Updated documentation that contained errors or wasn't up to date with …
Aug 14, 2006:
- 4:22 PM Changeset [2519] by
- will remove stdin/stdout if specified by config
- 2:30 PM Changeset [2518] by
- Fixes #170: Categorize annotation types
- 2:30 PM Ticket #170 (Categorize annotation types) closed by
- fixed: (In [2518]) Fixes #170: Categorize annotation types
- 12:07 PM Changeset [2517] by
- References #170: Install now sets correct permissions for categories
- 11:52 AM Changeset [2516] by
- References #170: Categorize annotation types Updated UML diagram
- 11:50 AM Changeset [2515] by
- References #170: Categorize annotation types Most of the core and web …
- 8:05 AM Ticket #319 (Spot images shown in experiment explorer do not seem to correspond to ...) updated by
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Milestone, Owner changed
There are some info that doesn't make sense to average. Spot images is …
Aug 12, 2006:
- 11:38 PM Ticket #10 (Analysis: Hierarchical clustering) updated by
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Owner, Status changed
- 11:37 PM Ticket #150 (Affymetrix support) closed by
- fixed: * The resulting expression matrix is still not available as a file and …
- 11:33 PM DownloadPage edited by
- New packaged release (revision 2514). (diff)
- 12:18 AM Ticket #319 (Spot images shown in experiment explorer do not seem to correspond to ...) created by
- When viewing avg of spots in experiment explorer under reporter view, …
Aug 11, 2006:
- 2:15 PM Ticket #127 (Experiment explorer) closed by
- fixed: (In [2514]) Fixes #127: Experiment explorer
- 2:15 PM Changeset [2514] by
- Fixes #127: Experiment explorer
- 8:15 AM Changeset [2513] by
- Do not show message about configurations for non-configurable plugins. …
Aug 10, 2006:
- 1:15 PM Ticket #305 (delete recusively) updated by
-
Status changed
- 12:18 PM Ticket #318 (Plugin configuration values are not stored for a job) created by
- Consider the following case: A user selects a plugin and …
- 12:08 PM Ticket #305 (delete recusively) updated by
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Milestone, Owner changed
- 12:07 PM Ticket #217 (Delete entire directory structure) closed by
- duplicate: Is part of #305: delete recusively
- 11:54 AM Ticket #302 (Running a plugin without a configuration should not be possible ...) closed by
- fixed: (In [2512]) Fixes #302: Running a plugin without a configuration …
- 11:54 AM Changeset [2512] by
- Fixes #302: Running a plugin without a configuration should not be possible
- 9:36 AM Ticket #39 (Handling a string with only blank space in required fields) closed by
- fixed: (In [2511]) Fixes #39 Handling a string with only blank space in …
- 9:36 AM Changeset [2511] by
- Fixes #39 Handling a string with only blank space in required fields. …
- 8:17 AM Ticket #302 (Running a plugin without a configuration should not be possible ...) updated by
-
Status changed
- 8:16 AM Changeset [2510] by
- Fixes #306: empty trashcan
- 8:16 AM Ticket #306 (empty trashcan) closed by
- fixed: (In [2510]) Fixes #306: empty trashcan
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