Timeline



Aug 9, 2006:

4:53 PM Ticket #39 (Handling a string with only blank space in required fields) updated by Martin Svensson
(In [2509]) References #39 Handling a string with only blank space in …
4:53 PM Changeset [2509] by Martin Svensson
References #39 Handling a string with only blank space in required …
4:15 PM Ticket #39 (Handling a string with only blank space in required fields) updated by Martin Svensson
Status, Owner changed
3:54 PM Ticket #306 (empty trashcan) updated by Nicklas Nordborg
Status, Milestone changed
3:48 PM Ticket #302 (Running a plugin without a configuration should not be possible ...) updated by Nicklas Nordborg
Milestone changed
3:30 PM Ticket #317 (Display and enter dates in different formats) updated by Johan Enell
The new format should also include time if possible.
2:59 PM Changeset [2508] by Martin Svensson
Fixes #315 Ctrl + clicking on the name of an images - opens two edit …
2:59 PM Ticket #315 (Ctrl + clicking on the name of an images - opens two edit windows for ...) closed by Martin Svensson
fixed: (In [2508]) Fixes #315 Ctrl + clicking on the name of an images - …
2:54 PM Ticket #315 (Ctrl + clicking on the name of an images - opens two edit windows for ...) updated by Martin Svensson
Status changed
2:46 PM Ticket #317 (Display and enter dates in different formats) created by Nicklas Nordborg
Add support in the web client for displaying and entering dates in …
2:45 PM Ticket #316 (Add support for color coding in data tables) created by Nicklas Nordborg
Base1 has a nice feature where ratios are displayed with a colored …
2:40 PM Ticket #313 (Error handling in import plugins) updated by Nicklas Nordborg
Maybe this should be configurable at the job level. Ie. the user could …
2:35 PM Ticket #266 (Strange mouse-over message in some places) closed by Martin Svensson
fixed: (In [2507]) Fixes #266 Strange mouse-over message in some places. view …
2:35 PM Changeset [2507] by Martin Svensson
Fixes #266 Strange mouse-over message in some places. view pages updated.
2:33 PM Ticket #170 (Categorize annotation types) updated by Nicklas Nordborg
(In [2506]) References #170: Categorize annotation types Updated UML …
2:33 PM Changeset [2506] by Nicklas Nordborg
References #170: Categorize annotation types Updated UML diagram
2:12 PM Ticket #170 (Categorize annotation types) updated by Nicklas Nordborg
Status changed
2:10 PM Changeset [2505] by Johan Enell
plugin parameters removed only job parameters
1:37 PM Ticket #315 (Ctrl + clicking on the name of an images - opens two edit windows for ...) created by Martin Svensson
1:33 PM Changeset [2504] by Nicklas Nordborg
Fixed problem with execution time estimation.
1:20 PM Ticket #266 (Strange mouse-over message in some places) updated by Martin Svensson
(In [2503]) References #266 Strange mouse-over message in some places. …
1:20 PM Changeset [2503] by Martin Svensson
References #266 Strange mouse-over message in some places. file-, …
1:03 PM Ticket #127 (Experiment explorer) updated by Nicklas Nordborg
(In [2502]) References #127: Experiment explorer Cleaned up and …
1:03 PM Changeset [2502] by Nicklas Nordborg
References #127: Experiment explorer Cleaned up and documented most …
11:17 AM Ticket #266 (Strange mouse-over message in some places) updated by Martin Svensson
(In [2501]) References #266 Strange mouse-over message in some places. …
11:17 AM Changeset [2501] by Martin Svensson
References #266 Strange mouse-over message in some places. …
10:36 AM Changeset [2500] by Martin Svensson
References # 266 Strange mouse-over message in some places. …

Aug 8, 2006:

4:09 PM Changeset [2499] by Nicklas Nordborg
Fixed problem with the new update method.
4:01 PM Ticket #314 (Update documentation that shows code examples with ...) closed by Nicklas Nordborg
fixed: (In [2498]) Fixes #314: Update documentation that shows code examples …
4:01 PM Changeset [2498] by Nicklas Nordborg
Fixes #314: Update documentation that shows code examples with …
3:58 PM Ticket #266 (Strange mouse-over message in some places) updated by Martin Svensson
Status changed
3:58 PM Ticket #266 (Strange mouse-over message in some places) updated by Martin Svensson
Owner changed
3:49 PM Ticket #314 (Update documentation that shows code examples with ...) updated by Nicklas Nordborg
Status changed
3:43 PM Changeset [2497] by Nicklas Nordborg
Better performance when creating a root bioassayset by fetching the …
2:55 PM Changeset [2496] by Nicklas Nordborg
Deleted obsolete files related to the removed AffyFeatureData class.
2:52 PM Ticket #173 (Attach Hardware/Software to more items) closed by Martin Svensson
fixed: (In [2495]) Fixes #173 Fully functional to create/delete HardwareType
2:52 PM Changeset [2495] by Martin Svensson
Fixes #173 Fully functional to create/delete HardwareType and attach …
1:35 PM Ticket #314 (Update documentation that shows code examples with ...) created by Nicklas Nordborg
The Transformation.newProduct() method changed because of ticket #196. …
1:20 PM Changeset [2494] by Nicklas Nordborg
* Fixed problem with FlatFileParser skipping every other section. * …
1:13 PM Changeset [2493] by dominic
gui changes and removal of default categories in install.java
12:57 PM Ticket #196 (Transformation.newProduct should create child BioAssays if possible) closed by Nicklas Nordborg
fixed: (In [2492]) Fixes #196: Transformation.newProduct should create child …
12:57 PM Changeset [2492] by Nicklas Nordborg
Fixes #196: Transformation.newProduct should create child BioAssays if …
11:36 AM DownloadPage edited by Jari Häkkinen
Updated demo server to revision 2491 (diff)
11:14 AM Ticket #196 (Transformation.newProduct should create child BioAssays if possible) updated by Nicklas Nordborg
Status changed
9:51 AM Changeset [2491] by Nicklas Nordborg
Fixes #168: Use formulas in table listings of bioassay data
9:51 AM Ticket #168 (Use formulas in table listings of bioassay data) closed by Nicklas Nordborg
fixed: (In [2491]) Fixes #168: Use formulas in table listings of bioassay data
9:31 AM Ticket #127 (Experiment explorer) updated by Nicklas Nordborg
Priority changed
9:30 AM Ticket #168 (Use formulas in table listings of bioassay data) updated by Nicklas Nordborg
Priority, Status changed
9:29 AM Ticket #127 (Experiment explorer) updated by Nicklas Nordborg
(In [2490]) References #127: Experiment explorer * Added …
9:29 AM Changeset [2490] by Nicklas Nordborg
References #127: Experiment explorer * Added annotations, support …

Aug 7, 2006:

3:49 PM Changeset [2489] by Jari Häkkinen
Added PostgreSQL setup information.
2:36 PM Ticket #241 (Files that have been used for parameters to a job can't be deleted properly) updated by Jari Häkkinen
Milestone changed
2:32 PM Ticket #189 (Allow export plugins to send download immediately to client) updated by Jari Häkkinen
Milestone changed
2:31 PM Ticket #169 (Use formulas for creating extra values) updated by Jari Häkkinen
Milestone changed
2:26 PM Ticket #172 (Add externalId property to annotation type) updated by Jari Häkkinen
Milestone changed
2:25 PM Ticket #108 (Logging the change history of an item) updated by Jari Häkkinen
Milestone changed
12:13 PM Changeset [2488] by Nicklas Nordborg
Fixed sorting problem with always visible columns

Aug 4, 2006:

2:33 PM Ticket #127 (Experiment explorer) updated by Nicklas Nordborg
(In [2487]) References #127: Experiment explorer First version. A lot …
2:33 PM Changeset [2487] by Nicklas Nordborg
References #127: Experiment explorer First version. A lot of the code …
2:15 PM Ticket #313 (Error handling in import plugins) created by Johan Enell
The reporter importer (and pobably others) fails when there is to long …
1:54 PM Ticket #312 (ReporterType import) created by Johan Enell
ReporterFlatFileImporter assumes that every reporter in the file has …

Aug 3, 2006:

5:20 PM Ticket #173 (Attach Hardware/Software to more items) updated by Martin Svensson
(In [2486]) References #173. Possible to attach a hardware to a …
5:20 PM Changeset [2486] by Martin Svensson
References #173. Possible to attach a hardware to a PlateEvent in the GUI
1:03 PM Changeset [2485] by Johan Enell
Position batcher added
10:48 AM Ticket #311 (Allow parsing of numbers with different locale settings) created by Nicklas Nordborg
The problem can arise in the FlatFileParser and it's different Mapper …
8:41 AM Changeset [2484] by Martin Svensson
Refrences #173 A hardware can now be attach to a Hybridization in the GUI.
8:35 AM Ticket #309 (count spots in bioassayset) closed by Nicklas Nordborg
fixed: (In [2483]) Fixes #309: count spots in bioassayset
8:35 AM Changeset [2483] by Nicklas Nordborg
Fixes #309: count spots in bioassayset
8:35 AM Ticket #309 (count spots in bioassayset) updated by Nicklas Nordborg
Milestone, Status changed
7:59 AM Changeset [2482] by Nicklas Nordborg
Fixes #310: Permission denied on raw bioassay
7:59 AM Ticket #310 (Permission denied on raw bioassay) closed by Nicklas Nordborg
fixed: (In [2482]) Fixes #310: Permission denied on raw bioassay
7:58 AM Ticket #310 (Permission denied on raw bioassay) updated by Nicklas Nordborg
Status, Milestone changed

Aug 2, 2006:

4:23 PM Ticket #264 (Base1 plug-in executer enhancements) updated by Johan Enell
Status changed
Can now import data and create new bioassays
2:39 PM Ticket #310 (Permission denied on raw bioassay) created by Johan Enell
I get a permission denied when clicking on a raw bioassay. The owned …
1:59 PM Changeset [2481] by Johan Enell
Base1PluginExecuter can now export data to base1 plug-in and import from it
12:57 PM Ticket #309 (count spots in bioassayset) created by Johan Enell
If a BioAssaySet only has spot data the spot count is wrong.
11:21 AM Changeset [2480] by Martin Svensson
Updated db schema_version and correct comments in BioMaterialEvent and …
9:40 AM Changeset [2479] by Martin Svensson
References #173 Made it possible to attach a Hardware item to …
9:40 AM Ticket #173 (Attach Hardware/Software to more items) updated by Martin Svensson
(In [2479]) References #173 Made it possible to attach a Hardware item …
9:11 AM Changeset [2478] by Martin Svensson
Fixed a corrupt link
8:15 AM Ticket #307 (display of annotation type to users from administrate page) closed by Nicklas Nordborg
invalid: In the view/presets dropdown one has to select the 'Shared to me' …
8:09 AM Ticket #308 (Firefox unresponsive script warning when uploading files) updated by Nicklas Nordborg
I can not reproduce this with Firefox version 1.5.0.3 on Linux. I …

Aug 1, 2006:

8:46 PM Ticket #307 (display of annotation type to users from administrate page) updated by Nicklas Nordborg
Milestone changed
8:46 PM Ticket #308 (Firefox unresponsive script warning when uploading files) updated by Nicklas Nordborg
Component, Milestone changed
7:19 PM Ticket #308 (Firefox unresponsive script warning when uploading files) created by msettles@…
When uploading affymetrix .CEL files, upload process occurs in …
4:13 PM Ticket #307 (display of annotation type to users from administrate page) created by rocca@…
I have noted the following: When creating a new user and setting the …
2:16 PM Changeset [2477] by Martin Svensson
Created an association between BiomaterialEventData-HardwareData and …
1:43 PM Ticket #306 (empty trashcan) created by Johan Enell
When you want to empty the trashcan you have to mark every item (max …
1:39 PM Ticket #305 (delete recusively) created by Johan Enell
When items are presented in a tree view (the analyse tree and the file …
8:34 AM Ticket #173 (Attach Hardware/Software to more items) updated by Martin Svensson
Status changed
8:26 AM Ticket #127 (Experiment explorer) updated by Nicklas Nordborg
Status changed
8:13 AM Changeset [2476] by Martin Svensson
Fixes #304 An empty list page is viewed when changing the …
8:13 AM Ticket #304 (An empty list page is viewed when changing the view-preferences for ...) closed by Martin Svensson
fixed: (In [2476]) Fixes #304 An empty list page is viewed when changing the …

Jul 31, 2006:

5:59 PM Changeset [2475] by dominic
Fixed issues from feedbacks: code comments and patterns, standards …
3:53 PM Ticket #263 (Update to latest versions of 3rd-party software) closed by Nicklas Nordborg
fixed: (In [2474]) Fixes #263: Update to latest versions of 3rd-party …
3:52 PM Changeset [2474] by Nicklas Nordborg
Fixes #263: Update to latest versions of 3rd-party software * Log4j: …
11:56 AM Ticket #304 (An empty list page is viewed when changing the view-preferences for ...) updated by Martin Svensson
Status changed
11:56 AM Ticket #304 (An empty list page is viewed when changing the view-preferences for ...) created by Martin Svensson
Precondition: Viewing items that's "Owned by me" and "Shared to me" …
9:12 AM Ticket #263 (Update to latest versions of 3rd-party software) updated by Nicklas Nordborg
Status changed
9:11 AM Ticket #303 (News items are not shown in View -> home page) updated by Nicklas Nordborg
Milestone changed
9:11 AM Ticket #303 (News items are not shown in View -> home page) closed by Nicklas Nordborg
fixed: (In [2473]) Fixes #303: News items are not shown in View -> home page …
9:11 AM Changeset [2473] by Nicklas Nordborg
Fixes #303: News items are not shown in View -> home page Needed a …
9:03 AM Ticket #302 (Running a plugin without a configuration should not be possible ...) updated by Nicklas Nordborg
Component, Milestone, Owner changed
Some plugins doesn't require a configuration. For example the existing …
8:43 AM Changeset [2472] by Martin Svensson
Added pool button for samples, extracts and labeledextracts.

Jul 26, 2006:

11:59 PM Changeset [2471] by Jari Häkkinen
Creating tab2mage export branch for Dominic.

Jul 22, 2006:

2:26 PM Changeset [2470] by Jari Häkkinen
Fixed spelling for 'successfully'.
11:17 AM Ticket #303 (News items are not shown in View -> home page) created by Jari Häkkinen
9:32 AM Ticket #150 (Affymetrix support) updated by Jari Häkkinen
Priority changed
The RMAExpress plug-in for BASE is release now as version 0.1. It is …
7:48 AM Ticket #302 (Running a plugin without a configuration should not be possible ...) created by Jari Häkkinen
and is not. However the behaviour of BASE should be changed in this …

Jul 13, 2006:

2:06 AM Ticket #150 (Affymetrix support) updated by Jari Häkkinen
A note to Henrik Bengtsson. We would be interested in hearing about …
2:01 AM Ticket #150 (Affymetrix support) updated by Jari Häkkinen
An experimental plug-in for computing expression values from uploaded …

Jul 12, 2006:

12:02 AM DownloadPage edited by Jari Häkkinen
New packaged release (revision 2469) (diff)

Jul 11, 2006:

6:21 PM Changeset [2469] by dominic
annotate.jsp update to add categories and modified java doc comment …
5:48 PM Changeset [2468] by dominic
fixed addAnnotationTypeCategory button with changes to edit_category.jsp
11:59 AM Changeset [2467] by Jari Häkkinen
Fixed spelling errors.
Note: See TracTimeline for information about the timeline view.