Timeline



Mar 10, 2006:

3:32 PM Ticket #123 (The textformat of item types in Edit role ->Permissions doesn't agree ...) updated by Martin Svensson
Summary changed
11:16 AM Ticket #122 (Creation of ArrayDesign: AffyChip check box does not work) updated by Martin Svensson
Status, Owner changed
11:09 AM Ticket #123 (The textformat of item types in Edit role ->Permissions doesn't agree ...) updated by Martin Svensson
Status changed
11:09 AM Ticket #123 (The textformat of item types in Edit role ->Permissions doesn't agree ...) created by Martin Svensson
The Item types under a role's permissions are written in singular …

Mar 9, 2006:

12:38 PM Ticket #122 (Creation of ArrayDesign: AffyChip check box does not work) created by rocca@…
Despite ticking the AffyChip box, the design is created as non affy

Mar 6, 2006:

1:34 PM Changeset [2071] by Martin Svensson
Testprocedures for projectadmin and updated newcommands
1:29 PM Changeset [2070] by Martin Svensson
Updated the text and corrected misspellings

Mar 3, 2006:

5:08 PM Ticket #119 (can't annotate sample in base 2 demo server) updated by Nicklas Nordborg
Component, Priority changed
This is probably a bug in the AnnotationSet.initPermissions method. …

Mar 2, 2006:

11:03 AM Ticket #118 (Not allowed to change password) updated by Johan Enell
Owner, Component changed
10:21 AM Ticket #117 (Failure to Create Raw BioAssay (tested on 2 different installs: linux ...) updated by Jari Häkkinen
The demo server has been upgraded and should not show the problem …
10:18 AM Changeset [2069] by Jari Häkkinen
Updated information on downloadable RC1 version.
9:30 AM Changeset [2068] by Gregory Vincic
Fixed handling of null parameter values. Null values are written as …

Mar 1, 2006:

5:31 PM Ticket #119 (can't annotate sample in base 2 demo server) updated by Johan Enell
Milestone, Version changed
5:30 PM Ticket #121 (create new raw bioassay error) updated by Johan Enell
Version, Milestone changed
5:30 PM Ticket #117 (Failure to Create Raw BioAssay (tested on 2 different installs: linux ...) updated by Johan Enell
Milestone changed
5:29 PM Ticket #120 (create new experiment error) updated by Johan Enell
Milestone changed
5:28 PM Ticket #120 (create new experiment error) closed by Johan Enell
duplicate: Known and fixes #117
5:25 PM Ticket #121 (create new raw bioassay error) closed by Johan Enell
duplicate: Known and fixed #117
4:12 PM Ticket #121 (create new raw bioassay error) created by anonymous
java.lang.NullPointerException on page …
4:10 PM Ticket #120 (create new experiment error) created by anonymous
java.lang.NullPointerException on page …

Feb 28, 2006:

4:17 PM Changeset [2067] by Gregory Vincic
Query needs to include shared plugins for users to use all available …
1:38 PM Ticket #119 (can't annotate sample in base 2 demo server) updated by Johan Enell
Status, Component changed
Annotations isnt migrated correct. Permission r in base1 must be …
12:27 PM Ticket #119 (can't annotate sample in base 2 demo server) updated by Jari Häkkinen
Owner, Status changed
11:37 AM Changeset [2066] by Jari Häkkinen
Checked in information explaining that downloadable RC1 is not the …
9:48 AM Changeset [2065] by Johan Enell
The method getRawDataType didnt return null for id = null
9:47 AM Ticket #117 (Failure to Create Raw BioAssay (tested on 2 different installs: linux ...) closed by Johan Enell
fixed: The method RawDataTypes.getRawDataType(String id) threw an exception …
9:02 AM Ticket #119 (can't annotate sample in base 2 demo server) updated by Jari Häkkinen
Status, Owner changed

Feb 27, 2006:

12:26 PM Ticket #119 (can't annotate sample in base 2 demo server) created by r.maccallr@…
Hi Jari/others, When I'm using my guest509 username on the base2 demo …
11:34 AM Ticket #118 (Not allowed to change password) created by anonymous
When trying to change my password i get the following error message: …

Feb 26, 2006:

10:18 PM Ticket #117 (Failure to Create Raw BioAssay (tested on 2 different installs: linux ...) updated by Jari Häkkinen
Owner, Status changed
Creating a new 'Experiment' or 'Raw Bioassay' fails (menu File -> New …

Feb 24, 2006:

11:54 PM Ticket #117 (Failure to Create Raw BioAssay (tested on 2 different installs: linux ...) updated by Jari Häkkinen
Status changed
11:53 PM Ticket #117 (Failure to Create Raw BioAssay (tested on 2 different installs: linux ...) updated by Jari Häkkinen
Owner changed
2:35 PM Ticket #8 (PrintMapBlockFileImporter) closed by Jari Häkkinen
fixed
2:17 PM Ticket #117 (Failure to Create Raw BioAssay (tested on 2 different installs: linux ...) created by rocca@…
Dear BASE Attemping to create a Raw Bioassay objects results in the …
1:36 PM Ticket #116 (Analyze of experiment fails) closed by Jari Häkkinen
duplicate: Sorry, this is a known issue and there is a solution, see ticket:99

Feb 23, 2006:

10:46 PM Ticket #8 (PrintMapBlockFileImporter) updated by Jari Häkkinen
Milestone changed
10:45 PM Ticket #78 (pinbase median ratio normalization) updated by Jari Häkkinen
Milestone changed
10:42 PM Ticket #9 (Normalization: Lowess) closed by Jari Häkkinen
fixed: It is now a part of the BASE core plug-ins.
10:41 PM Ticket #84 (getRequestInformation returns TODO in description fields for many plugins) updated by Jari Häkkinen
Milestone changed
10:40 PM Milestone BASE 2.0 RC1 completed
This release is aimed at being the first release that we will …
10:39 PM Ticket #116 (Analyze of experiment fails) created by Jari Häkkinen
The analyze experiment feature does not work. Trying to create a new …
10:13 PM Ticket #115 (DemoServer internal error on startup) closed by Jari Häkkinen
fixed: Tomcat 5 stopped working. Nothing helped, I even resorted to CPR but …
4:22 PM Ticket #115 (DemoServer internal error on startup) created by sdavis2@…
Got this when trying to start the base2 server: Server error! The …
4:05 PM Changeset [2064] by Jari Häkkinen
Fixed spelling error.
3:16 PM Changeset [2063] by Nicklas Nordborg
Releasing RC1
3:10 PM Changeset [2062] by Gregory Vincic
small bug in last query
2:52 PM Changeset [2061] by Johan Enell
Made some corrections on Lowess
2:30 PM Changeset [2060] by Jari Häkkinen
Bumped to RC1.
2:20 PM Changeset [2059] by Jari Häkkinen
Information about people involved in BASE 2, presently and in the past.
2:13 PM Changeset [2058] by Nicklas Nordborg
Make sure the correct web.xml (/src/web.xml.in) is copied by ant dist.
11:42 AM Changeset [2057] by Nicklas Nordborg
Added CompileAll servlet
8:45 AM Changeset [2056] by Martin Svensson
Correct some misspellings
12:28 AM Changeset [2055] by Jari Häkkinen
Added subversion properties to .html files.
12:22 AM Changeset [2054] by Jari Häkkinen
Added svn:ignore to exclude api direcotry.

Feb 22, 2006:

11:55 PM Changeset [2053] by Jari Häkkinen
Added subversion properties to .xml files.
11:48 PM Changeset [2052] by Jari Häkkinen
Added copyright and license notice.
4:20 PM Changeset [2051] by Martin Svensson
Adapted and updated documents to the new listpages
2:55 PM Changeset [2050] by Nicklas Nordborg
Exclude Oracle JDBC driver from "ant dist"
2:33 PM Ticket #114 (Default values for plugin parameters are not shown.) closed by Nicklas Nordborg
fixed
2:32 PM Changeset [2049] by Nicklas Nordborg
Fixed ticket #114: Default values for plugin parameters are not shown.
2:19 PM Changeset [2048] by Nicklas Nordborg
Directory.createHomeDirectory no longer shares the new directories to …
2:03 PM Changeset [2047] by Nicklas Nordborg
Fixed rounding errors while parsing and formatting byte values.
1:30 PM Changeset [2046] by Nicklas Nordborg
Fixed bug where projects keys didn't get loaded correctly due to a …
12:09 PM Changeset [2045] by Nicklas Nordborg
Fixed problem where the InternalStorageController sets the location of …
11:02 AM Changeset [2044] by Jari Häkkinen
Updated copyright notice.
10:58 AM Changeset [2043] by Jari Häkkinen
Added information on how to create a plug-in.
10:49 AM Ticket #113 (Re-upload a file should have a checkbox option to verify against old MD5) closed by Nicklas Nordborg
fixed
10:49 AM Changeset [2042] by Nicklas Nordborg
Fixed ticket #113: Re-upload a file should have a checkbox option to …
9:49 AM Ticket #112 (view/download of files with national characters doesn't work) closed by Nicklas Nordborg
fixed: This link may be useful: http://java2.5341.com/msg/76475.html
9:48 AM Changeset [2041] by Nicklas Nordborg
Fixed ticket #112: view/download of files with national characters …
8:49 AM Changeset [2040] by Nicklas Nordborg
Now creates child bioassays. Moved batcher.close() and dc.commit() to …
8:43 AM Ticket #114 (Default values for plugin parameters are not shown.) created by Nicklas Nordborg
The web client ignores default values for plugin parameters and just …

Feb 21, 2006:

4:21 PM Ticket #74 (HibernateUtil doesn't find configuration file if installation path ...) closed by Martin Svensson
fixed
4:20 PM Changeset [2039] by Martin Svensson
Fixed ticket #74: HibernateUtil doesn't find configuration file if …
3:44 PM Changeset [2038] by Nicklas Nordborg
Added SecondaryStorageController and InternalStorageController. More …
3:26 PM Changeset [2037] by Johan Enell
added ignore to log4j.properties
2:56 PM Changeset [2036] by Johan Enell
LowessNormalization added
2:55 PM Ticket #113 (Re-upload a file should have a checkbox option to verify against old MD5) created by Nicklas Nordborg
If the checkbox is checked the upload will be rejected if the MD5 of …
2:04 PM Ticket #112 (view/download of files with national characters doesn't work) created by Nicklas Nordborg
For example a file named: två View link in browser: …
11:22 AM Ticket #70 (Lazy creation of PreparedStatments in BasicBatcher.) closed by Nicklas Nordborg
wontfix: Well, we are probably better of creating the statements in the …
11:21 AM Changeset [2035] by Nicklas Nordborg
Fixed ticket #70: Lazy creation of PreparedStatments in BasicBatcher. …
11:14 AM Ticket #71 (java.sql.Date is hardcoded in BasicBatcher) closed by Nicklas Nordborg
fixed
11:13 AM Changeset [2034] by Nicklas Nordborg
Fixed ticket #71: java.sql.Date is hardcoded in BasicBatcher
8:36 AM Changeset [2033] by Nicklas Nordborg
Removed unused import
8:25 AM Changeset [2032] by Nicklas Nordborg
Fucking eclipse!
8:23 AM Changeset [2031] by Nicklas Nordborg
Removed unused imports

Feb 20, 2006:

3:59 PM Changeset [2030] by Nicklas Nordborg
Fixed ticket #91: Export fails if there are too many items (MySQL only)
3:59 PM Ticket #91 (Export fails if there are too many items (MySQL only)) closed by Nicklas Nordborg
fixed
12:29 PM Changeset [2029] by Nicklas Nordborg
Fixed ticket #101: Add try / catch around all Query.iterate methods in …
12:27 PM Ticket #101 (Add try / catch around all Query.iterate methods in list pages) closed by Nicklas Nordborg
fixed
11:36 AM Ticket #69 (Funny looking line showing when last tab is visible) closed by Nicklas Nordborg
worksforme
11:29 AM Ticket #80 (RawDataPropertyExpression.getColumn should cache column information) closed by Nicklas Nordborg
fixed
11:26 AM Changeset [2028] by Nicklas Nordborg
Fixed ticket #80: RawDataPropertyExpression.getColumn should cache …
11:17 AM Changeset [2027] by Gregory Vincic
Fixed column order in the configuration view
10:24 AM Changeset [2026] by Nicklas Nordborg
Added some more intensity formulas to raw data types. Ticket #90: Add …
10:24 AM Ticket #90 (Add more raw data types with intensity formulas to default settings) closed by Nicklas Nordborg
fixed
9:28 AM Changeset [2025] by Nicklas Nordborg
Fixed ticket #68: Application.BUILD should be updated automatically.
9:27 AM Ticket #68 (Application.BUILD should be updated automatically.) closed by Nicklas Nordborg
fixed: The "ant dist" command now uses the "svnversion" command to get the …
8:20 AM Ticket #111 (The User columns don't have the same order when all columns are shown) closed by Nicklas Nordborg
worksforme

Feb 17, 2006:

4:59 PM Changeset [2024] by Martin Svensson
Updated testdocument for List columns,Filter and User admin
4:47 PM Ticket #75 (Remove unused code in migrate package) closed by Gregory Vincic
fixed: Fixed
4:47 PM Changeset [2023] by Gregory Vincic
Fixed ticket #75 removing warnings and unused code
3:51 PM Changeset [2022] by Nicklas Nordborg
Fixed ticket #89: Check list of hardware / software that the …
3:51 PM Ticket #88 (Installation should add print robots) closed by Nicklas Nordborg
fixed
3:50 PM Ticket #89 (Check list of hardware / software that the installation program is adding) closed by Nicklas Nordborg
fixed
3:06 PM Changeset [2021] by Nicklas Nordborg
Install can now update existing database and add missing items.
3:04 PM Ticket #111 (The User columns don't have the same order when all columns are shown) created by Martin Svensson
The columns in userlist don't get the same order when selecting All …
1:48 PM Changeset [2020] by Jari Häkkinen
Using original gif (instead for generated png) image for html.
1:25 PM Changeset [2019] by Jari Häkkinen
Added web dev status figure to the test document.
12:42 PM Changeset [2018] by Nicklas Nordborg
Removed Filter. It has now been completely replaced by ItemContext.
11:59 AM Changeset [2017] by Nicklas Nordborg
Removed TableInfo class since all list pages now use the ItemContext
9:57 AM Changeset [2016] by Nicklas Nordborg
Changed system id:s to upper case
9:49 AM Changeset [2015] by Nicklas Nordborg
Quota now use the new list and view page design
9:29 AM Ticket #110 (Potential threading problem in /www/analyze/index.jsp) closed by Gregory Vincic
fixed: Fixed. Index is now generated with the javascript treeline.js
9:28 AM Changeset [2014] by Gregory Vincic
Fixed ticket #110
9:17 AM Changeset [2013] by Jari Häkkinen
Made section numbers coherrent with the web interface dev status image.
8:53 AM Ticket #31 (Changing list columns - list of visible columns becomes empty) closed by Gregory Vincic
fixed
8:45 AM Changeset [2012] by Nicklas Nordborg
Mime types now use the new list and view page design
8:31 AM Changeset [2011] by Nicklas Nordborg
Quota types now use the new list and view page design
8:24 AM Changeset [2010] by Nicklas Nordborg
File types now use the new list and view page design
8:19 AM Ticket #110 (Potential threading problem in /www/analyze/index.jsp) created by Nicklas Nordborg
The file /www/analyze/index.jsp has declared a: […] The index is …

Feb 16, 2006:

5:38 PM Changeset [2009] by Gregory Vincic
Fixed ticket #31 'Changing list columns - list of visible columns …
3:59 PM Ticket #50 (New list and view page design for Hardware type and Software type) closed by Nicklas Nordborg
fixed
3:55 PM Changeset [2008] by Nicklas Nordborg
Fixed ticket #50: New list and view page design for Hardware type and …
3:37 PM Ticket #103 (Display name of current item in 'Set access permissions' dialog) updated by Gregory Vincic
Owner changed
2:37 PM Ticket #28 (Returning to mainpage from viewing all the news) closed by Gregory Vincic
fixed
2:37 PM Changeset [2007] by Gregory Vincic
Fixed ticket #28 'It could be useful to have a way to get back to …
2:26 PM Changeset [2006] by Nicklas Nordborg
Added Main.trimString() javascript function
2:25 PM Ticket #39 (Handling a string with only blank space in required fields) updated by Nicklas Nordborg
I have added a JavaScript funtion to main library: Main.trimString() …
2:15 PM Ticket #52 (Auto refresh job view when job not done) closed by Gregory Vincic
fixed
2:15 PM Changeset [2005] by Gregory Vincic
Fixing ticket #52. "Job view should be automatically updated every X …
2:14 PM Ticket #52 (Auto refresh job view when job not done) updated by Gregory Vincic
Milestone, Status changed
2:05 PM Changeset [2004] by Nicklas Nordborg
Client application admin now use the new list and view page design
1:56 PM Ticket #77 (Well annotations) updated by Gregory Vincic
Description changed
1:56 PM Ticket #77 (Well annotations) closed by Gregory Vincic
fixed: Fixed
1:24 PM Changeset [2003] by Nicklas Nordborg
Fixed ticket #105: Load a filter preset gives an unexpected error
1:24 PM Ticket #105 (Load a filter preset gives an unexpected error) closed by Nicklas Nordborg
fixed
12:35 PM Ticket #106 (Export with no exported columns gives an unexpected error) closed by Nicklas Nordborg
fixed
12:35 PM Changeset [2002] by Nicklas Nordborg
Fixed ticket #109: Can't find file 'save_as.jsp' when trying to browse …
12:33 PM Ticket #109 (Can't find file 'save_as.jsp' when trying to browse in Export options) closed by Nicklas Nordborg
fixed
12:21 PM Ticket #109 (Can't find file 'save_as.jsp' when trying to browse in Export options) updated by Nicklas Nordborg
Milestone, Owner changed
12:14 PM Ticket #25 (Changing information on how to get an account does not propagete to ...) closed by Nicklas Nordborg
fixed
12:14 PM Changeset [2001] by Nicklas Nordborg
Fixed ticket #25: Changing information on how to get an account does …
11:47 AM Changeset [2000] by Gregory Vincic
Fixed ticket #77 and started working on removing unused code (ticket …
11:23 AM Changeset [1999] by Nicklas Nordborg
Fixed ticket #79: LabeledExtract.getHybridizations need a restriction …
11:23 AM Ticket #79 (LabeledExtract.getHybridizations need a restriction) closed by Nicklas Nordborg
fixed
10:55 AM Ticket #65 (New list and view page design for Reporter types) closed by Nicklas Nordborg
fixed
10:55 AM Changeset [1998] by Nicklas Nordborg
Fixed ticket #65: New list and view page design for Reporter types
10:32 AM Ticket #46 (New list and view page design for News) closed by Nicklas Nordborg
fixed
10:31 AM Changeset [1997] by Nicklas Nordborg
Fixed ticket #46: New list and view page design for News
9:18 AM Ticket #94 (Fix list of pooled samples/extracts/labeled extracts on view pages) closed by Nicklas Nordborg
fixed
9:16 AM Changeset [1996] by Nicklas Nordborg
Fixed ticket #94: Fix list of pooled samples/extracts/labeled extracts …
8:58 AM Ticket #54 (New list and view page design for plugins) closed by Nicklas Nordborg
fixed
8:57 AM Ticket #103 (Display name of current item in 'Set access permissions' dialog) updated by Nicklas Nordborg
Type changed
Currently, this is not an easy fix, since multiple items may have been …
8:53 AM Ticket #109 (Can't find file 'save_as.jsp' when trying to browse in Export options) created by Martin Svensson
The client tries to open a file that doesn't exist in Export options …
8:45 AM Ticket #106 (Export with no exported columns gives an unexpected error) updated by Nicklas Nordborg
Milestone changed
8:44 AM Ticket #105 (Load a filter preset gives an unexpected error) updated by Nicklas Nordborg
Priority, Milestone changed
8:44 AM Ticket #105 (Load a filter preset gives an unexpected error) updated by Nicklas Nordborg
Owner, Status changed
8:43 AM Ticket #106 (Export with no exported columns gives an unexpected error) updated by Nicklas Nordborg
Status changed
8:42 AM Ticket #106 (Export with no exported columns gives an unexpected error) updated by Nicklas Nordborg
Owner changed
8:40 AM Changeset [1995] by Nicklas Nordborg
Plugin configurations now use the new list and view page design. This …
8:16 AM Ticket #108 (Logging the change history of an item) created by Nicklas Nordborg
Implement a log function that logs whenever an item is modified. It …
8:12 AM Ticket #107 (Any-to-any relation) created by Nicklas Nordborg
Add functionality that allows creating links between any two types of …

Feb 15, 2006:

4:51 PM Ticket #106 (Export with no exported columns gives an unexpected error) created by Martin Svensson
Trying to Export a list with no columns in exported columns throws an …
4:19 PM Ticket #105 (Load a filter preset gives an unexpected error) created by Martin Svensson
Trying to load a preset filter from the Manage window - throws an …
3:03 PM Changeset [1994] by Nicklas Nordborg
Fixed ticket #104: Add users to a role gives an unexpected error.
3:03 PM Ticket #104 (Add users to a role gives an unexpected error.) closed by Nicklas Nordborg
fixed
1:53 PM Changeset [1993] by Nicklas Nordborg
Plugin admin is now using the new list and view page design
1:51 PM Ticket #104 (Add users to a role gives an unexpected error.) created by Martin Svensson
There is an exception when pressing the button Add users... in Edit …
9:48 AM Changeset [1992] by Gregory Vincic
Added -server flag which should fix the following error Exception in …
9:44 AM Changeset [1991] by Nicklas Nordborg
Plugin types now use the new list and view page design
9:07 AM Changeset [1990] by Nicklas Nordborg
Added jsp.compile target to build.xml which compiles all JSP pages

Feb 14, 2006:

9:06 PM Changeset [1989] by Nicklas Nordborg
Updated development status
6:43 PM Changeset [1988] by Johan Vallon-Christersson
added test for creating a protocol
5:26 PM Ticket #103 (Display name of current item in 'Set access permissions' dialog) created by anonymous
When setting access permissions for an item, the name of the item in …
3:55 PM Changeset [1987] by Nicklas Nordborg
Fixed ticket #57: Plate mappings view page is not complete
3:55 PM Ticket #57 (Plate mappings view page is not complete) closed by Nicklas Nordborg
fixed
3:31 PM Changeset [1986] by Nicklas Nordborg
Fixed ticket #102: User->New... gives: java.lang.NullPointerException
3:30 PM Ticket #102 (User->New... gives: java.lang.NullPointerException on page ...) updated by Nicklas Nordborg
Milestone changed
3:30 PM Ticket #102 (User->New... gives: java.lang.NullPointerException on page ...) closed by Nicklas Nordborg
fixed
3:25 PM Ticket #53 (Annotate items page is bad) closed by Nicklas Nordborg
fixed
3:25 PM Changeset [1985] by Nicklas Nordborg
Fixed ticket #53: Annotate items page is bad
2:49 PM Changeset [1984] by Johan Vallon-Christersson
spelling error
1:42 PM Ticket #102 (User->New... gives: java.lang.NullPointerException on page ...) created by Martin Svensson
Trying to create/add a new user or a new group gives a …
1:23 PM Changeset [1983] by Nicklas Nordborg
Fixed compilation error
1:08 PM Changeset [1982] by Gregory Vincic
Fixing migration bug where users where mapped incorrectly
1:02 PM Changeset [1981] by Nicklas Nordborg
Raw data types are now sorted
12:19 PM Ticket #101 (Add try / catch around all Query.iterate methods in list pages) created by Nicklas Nordborg
If there is an error in the query the page will only display a stack …
12:12 PM Ticket #49 (New list and view page design for Annotation types) closed by Nicklas Nordborg
fixed
12:12 PM Changeset [1980] by Nicklas Nordborg
Fixed ticket #49: New list and view page design for Annotation types
9:58 AM Ticket #100 (IllegalArgumentException occurred calling getter of ...) closed by Nicklas Nordborg
fixed
9:57 AM Changeset [1979] by Nicklas Nordborg
Fixed ticket #100: IllegalArgumentException occurred calling getter of …
8:07 AM Changeset [1978] by Nicklas Nordborg
ArrayDesignPlate is child item to ArrayDesign

Feb 13, 2006:

4:52 PM Ticket #44 (Clean up the User prefences dialog box) closed by Martin Svensson
fixed
4:51 PM Changeset [1977] by Martin Svensson
Fixed ticket #44: Clean up the User prefences dialog box
4:18 PM Ticket #100 (IllegalArgumentException occurred calling getter of ...) created by Nicklas Nordborg
Happens on the View / Files page. Seems to be related to Hibernate …
4:15 PM Ticket #61 (Array design can't be connected to plate) closed by Nicklas Nordborg
fixed
4:00 PM Changeset [1976] by Nicklas Nordborg
Fixed ticket #61: Array design can't be connected to plate
3:24 PM Ticket #74 (HibernateUtil doesn't find configuration file if installation path ...) updated by Nicklas Nordborg
Owner changed
3:14 PM Ticket #44 (Clean up the User prefences dialog box) updated by Nicklas Nordborg
Owner changed
2:50 PM Ticket #61 (Array design can't be connected to plate) updated by Nicklas Nordborg
Status changed
1:58 PM Changeset [1975] by Nicklas Nordborg
Better implementation of HibernateUtil.isEmptyDatabase
12:07 PM Changeset [1974] by Nicklas Nordborg
Updated to Hibernate 3.1.2 Moved all Hibernate options from …
12:01 PM Changeset [1973] by Nicklas Nordborg
Fixed NPE when not logged in.
11:50 AM Ticket #99 (java.lang.NoSuchMethodError: getHibernateLazyInitializer) closed by Nicklas Nordborg
wontfix
11:49 AM Ticket #99 (java.lang.NoSuchMethodError: getHibernateLazyInitializer) created by Nicklas Nordborg
This bug appears when proxy objects are needed to be initialized from …
11:15 AM Changeset [1972] by Nicklas Nordborg
Now closes the DbControl in case of an exception
11:07 AM Changeset [1971] by Martin Svensson
Test procedures for listpages and added new commands
9:08 AM Changeset [1970] by Nicklas Nordborg
Edit user updated to new design. Finished ticket #47: New list and …
9:08 AM Ticket #47 (New list and view page design for Users, Groups and Roles) closed by Nicklas Nordborg
fixed

Feb 10, 2006:

4:13 PM Changeset [1969] by Nicklas Nordborg
New files for user admin
4:12 PM Changeset [1968] by Nicklas Nordborg
Changed user admin to new list and view page design Edit user still …
2:54 PM Changeset [1967] by Gregory Vincic
Organizing imports
2:37 PM Ticket #77 (Well annotations) updated by Gregory Vincic
Status, Milestone changed
2:37 PM Ticket #75 (Remove unused code in migrate package) updated by Gregory Vincic
Priority, Milestone changed
2:36 PM Ticket #23 (Apply button in popup windows?) updated by Gregory Vincic
Owner, Milestone changed
2:36 PM Ticket #39 (Handling a string with only blank space in required fields) updated by Gregory Vincic
Owner changed
2:35 PM Ticket #29 (Filtering News on dates) updated by Gregory Vincic
Owner changed
2:28 PM Ticket #37 (New/Edit user - Handling of duplicate login) updated by Gregory Vincic
Milestone, Owner, Status changed
2:19 PM Changeset [1966] by Nicklas Nordborg
Added help/faq/report bug links to my base page
2:08 PM Ticket #73 (Mouse over highlighting the rows in tables) closed by Nicklas Nordborg
fixed
1:59 PM Changeset [1965] by Nicklas Nordborg
Change roles admin to new list and view page design Changed how …
1:43 PM Ticket #37 (New/Edit user - Handling of duplicate login) updated by Gregory Vincic
Status, Milestone changed
11:20 AM Changeset [1964] by Gregory Vincic
Correction factor plot tab is hidden for RawBioAssaySets
11:05 AM Changeset [1963] by Gregory Vincic
Listing plugin parameters in the properties view
10:37 AM Ticket #16 (Configurable link to Report a bug) closed by Nicklas Nordborg
fixed
9:41 AM Changeset [1962] by Martin Svensson
Undo on a wrong commit
9:29 AM Ticket #98 ("Excluded" items are still included if a list is exported) created by Nicklas Nordborg
For all list pages it is possible to specify the ID:s of items to …
9:21 AM Changeset [1961] by Nicklas Nordborg
Added "exclude" option to all list pages. This option excludes items …
9:02 AM Changeset [1960] by Martin Svensson
Fixed ticket #16 Configurable link to Report a bug

Feb 9, 2006:

4:08 PM Changeset [1959] by Nicklas Nordborg
Changed group admin to the new list and view page design
3:23 PM Ticket #63 (Clean up javadoc warnings) closed by Gregory Vincic
fixed: Fixed
3:14 PM Changeset [1958] by Gregory Vincic
Fixed ticket #63
3:02 PM Ticket #47 (New list and view page design for Users, Groups and Roles) updated by Nicklas Nordborg
Status changed
2:53 PM Ticket #3 (Update doesn't create indexes) updated by Nicklas Nordborg
Status, Owner changed
2:43 PM Changeset [1957] by Nicklas Nordborg
SessionControl ID is now passed on to About dialog box
2:42 PM Changeset [1956] by Nicklas Nordborg
Fixed border around more icon
2:18 PM Changeset [1955] by Nicklas Nordborg
Fixed ticket #87: Installation should create 4 well annotations types …
2:18 PM Ticket #87 (Installation should create 4 well annotations types found in Base 1) closed by Nicklas Nordborg
fixed
2:06 PM Ticket #59 (Correction factor plot) closed by Gregory Vincic
fixed: Correction factor plot is generated by JFreePlotServlet.
2:04 PM Changeset [1954] by Gregory Vincic
Added documentation and example plots
12:59 PM Changeset [1953] by Gregory Vincic
Added optional parameters width, height, format and addCurrentOverviewData
12:58 PM Changeset [1952] by Gregory Vincic
New BioAssays inherit their parents name
12:04 PM Ticket #93 (Fix list of labeled extracts on View hybridization page) closed by Nicklas Nordborg
fixed
12:03 PM Changeset [1951] by Nicklas Nordborg
Fixed ticket #93: Fix list of labeled extracts on View hybridization page
11:54 AM Ticket #95 (Fix list of raw bioassays on view experiment page) closed by Nicklas Nordborg
fixed
11:52 AM Ticket #97 (Trashcan functionality) created by Nicklas Nordborg
Implement a trashcan functionality in the web interface were a user …
11:50 AM Changeset [1950] by Nicklas Nordborg
Fixed ticket #95: Fix list of raw bioassays on view experiment page
11:18 AM Changeset [1949] by Nicklas Nordborg
Added title attribute to links created by Base.getEncodedName
11:15 AM Ticket #96 (Inherit annotations) created by Nicklas Nordborg
Add web interface for managing inherited annotations.
11:10 AM Ticket #95 (Fix list of raw bioassays on view experiment page) created by Nicklas Nordborg
The list should have the same look and feel as the labeled extracts …
11:09 AM Ticket #94 (Fix list of pooled samples/extracts/labeled extracts on view pages) created by Nicklas Nordborg
The list should have the same look and feel as the labeled extracts …
11:07 AM Ticket #93 (Fix list of labeled extracts on View hybridization page) created by Nicklas Nordborg
Missing link to labeled extract and label
11:05 AM Ticket #56 (Plate view page is not complete) closed by Nicklas Nordborg
fixed
11:05 AM Changeset [1948] by Nicklas Nordborg
Fixed ticket #56: Plate view page is not complete
10:48 AM Ticket #56 (Plate view page is not complete) updated by Nicklas Nordborg
Status changed
10:41 AM Ticket #88 (Installation should add print robots) updated by Nicklas Nordborg
Sent mail to JVC asking about this.
10:40 AM Ticket #89 (Check list of hardware / software that the installation program is adding) updated by Nicklas Nordborg
Status changed
Sent mail to JVC asking about this.
10:40 AM Ticket #88 (Installation should add print robots) updated by Nicklas Nordborg
Status changed
10:02 AM Changeset [1947] by Gregory Vincic
Added getParents to BioAssay
9:54 AM Changeset [1946] by Nicklas Nordborg
Added ImaGene raw data type
9:04 AM Changeset [1945] by Nicklas Nordborg
Fixed ticket #92: Export doesn't work for Raw data
9:03 AM Ticket #92 (Export doesn't work for Raw data) closed by Nicklas Nordborg
fixed

Feb 8, 2006:

3:57 PM Changeset [1944] by Nicklas Nordborg
Fixed ticket #55: Plugin select view generates NullPointerException
3:56 PM Ticket #55 (Plugin select view generates NullPointerException when plugin ...) closed by Nicklas Nordborg
fixed
2:17 PM Ticket #66 (Missing information in about raw data) closed by Nicklas Nordborg
fixed
2:16 PM Changeset [1943] by Nicklas Nordborg
Fixed ticket #66: Missing information in about raw data Added …
1:39 PM Changeset [1942] by Nicklas Nordborg
TestRawBioAssay now creates raw bio assay that links to array design …
11:55 AM Ticket #92 (Export doesn't work for Raw data) created by Nicklas Nordborg
Probably because the new "subcontext" setting isn't passed to the …
11:36 AM Ticket #62 (Missing info about Features) closed by Nicklas Nordborg
fixed
11:36 AM Changeset [1941] by Nicklas Nordborg
Fixed ticket #62: Missing info about Features Added reporter and well …
10:59 AM Changeset [1940] by Nicklas Nordborg
Ticket #64: Missing information about wells Added reporter columns to …
10:24 AM Changeset [1939] by Nicklas Nordborg
Fixed ticket #64: Missing information about wells
10:24 AM Ticket #64 (Missing information about wells) closed by Nicklas Nordborg
fixed
9:26 AM Changeset [1938] by Nicklas Nordborg
Added QuantArray raw data types Added some intensity formulas to other …
Note: See TracTimeline for information about the timeline view.