Timeline
Jan 30, 2006:
- 11:09 PM TracCgi edited by
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- 11:09 PM TracInterfaceCustomization created by
- 11:09 PM TracUpgrade edited by
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- 11:09 PM TracUnicode edited by
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- 11:09 PM TracAccessibility edited by
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- 11:09 PM TracEnvironment edited by
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- 11:09 PM TracFastCgi edited by
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- 11:09 PM TracGuide edited by
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- 11:09 PM TracImport edited by
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- 11:09 PM TracIni edited by
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- 11:09 PM TracInstall edited by
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- 11:09 PM TracLinks edited by
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- 11:09 PM TracModPython edited by
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- 11:09 PM TracNotification edited by
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- 11:09 PM TracPermissions edited by
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- 11:09 PM TracPlugins edited by
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- 11:09 PM TracQuery edited by
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- 11:09 PM TracReports edited by
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- 11:09 PM TracRoadmap edited by
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- 11:09 PM TracRss edited by
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- 11:09 PM TracStandalone edited by
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- 11:09 PM TracSupport edited by
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- 11:09 PM TracSyntaxColoring edited by
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- 11:09 PM TracTickets edited by
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- 11:09 PM TracTicketsCustomFields edited by
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- 11:09 PM TracTimeline edited by
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- 11:09 PM TracWiki edited by
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- 11:09 PM WikiDeletePage edited by
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- 11:09 PM WikiFormatting edited by
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- 11:09 PM WikiMacros edited by
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- 11:09 PM WikiPageNames edited by
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- 11:09 PM WikiProcessors edited by
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- 11:09 PM WikiRestructuredTextLinks edited by
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- 2:07 PM Ticket #34 (Plugin for spot image generation) created by
- The generation of spot images is now called directly from a JSP page. …
- 2:02 PM Ticket #32 (A plugin must set a response status ) closed by
- fixed
- 2:02 PM Changeset [1868] by
- Fixed bug #32: A plugin must set a response status
- 1:56 PM Changeset [1867] by
- BioAssaySet view uses the new tabbed design.
- 1:43 PM Changeset [1866] by
- BioSources now use the new list and view page design
- 1:17 PM Changeset [1865] by
- Fixed column widths for the new list design
- 1:06 PM Changeset [1864] by
- Labels now use the new list and view page design
- 12:52 PM Changeset [1863] by
- New view page design for: Protocol, Protocol type, Hardware, Software …
- 12:00 PM Changeset [1862] by
- Plates now use the new view page design Wells and plate events added …
- 9:16 AM Changeset [1861] by
- Arra slides, batches and design now use the new view page design
- 9:15 AM Changeset [1860] by
- Added visible attribute to Tab taglib
- 9:09 AM Changeset [1859] by
- Passed the job to the IntensityCalculatorUtil
- 8:30 AM Changeset [1858] by
- Hybridizations now use the new view page design
Jan 27, 2006:
- 2:55 PM Changeset [1857] by
- Added view_bioassayset.jsp
- 2:51 PM Changeset [1856] by
- View scan now use the new view page design Added pages for scan images
- 1:46 PM Changeset [1855] by
- View raw bioassays now use the new view page design
- 12:05 PM Changeset [1854] by
- View experiment now use the new view page design
- 11:57 AM Changeset [1853] by
- View reporter now use the new view page design
- 11:47 AM Changeset [1852] by
- Plate geometries use the new view page design
- 11:39 AM Changeset [1851] by
- New design for view and list pages Plate types is the first example
Jan 26, 2006:
- 3:48 PM Changeset [1850] by
- Plate mapping now uses the new list design
- 3:05 PM Ticket #30 (Preset is not removed from drop-downlist after it had been deleted) closed by
- fixed: Sort of fixed. The preset is not removed from the list, but no …
- 3:04 PM Changeset [1849] by
- Partly fixed bug #30: Preset is not removed from drop-downlist after …
- 2:22 PM Changeset [1848] by
- Plate types are ownable and the owner is now displayed and included in …
- 2:15 PM Changeset [1847] by
- Plates now use the new list design
- 1:47 PM Changeset [1846] by
- First revision
- 12:03 PM Changeset [1845] by
- Added log4j.properties.in and removed log4j.properties so everyone can …
- 11:57 AM Ticket #24 (Adding an administrator name with non-US characters looks strange) closed by
- fixed: Updated base.config.in to not include any characterEncoding setting.
- 11:56 AM Ticket #3 (Update doesn't create indexes) closed by
- fixed
- 11:54 AM Changeset [1844] by
- Switched from SchemaUpdate to SchemaExport in createStaticTables so …
- 11:53 AM Ticket #33 (The fields in "Columns " button are sometimes too short, i.e. the text ...) created by
- When I'm editing "Set column order and visiblity" in the "edit raw …
- 11:51 AM Ticket #22 (Server configuration. Setting unlimited with G or Gb does not change ...) closed by
- fixed: i) Fixed. Tried to stora too large value in an int. Changed to long.
- 11:08 AM Ticket #32 (A plugin must set a response status ) created by
- If a plugin doesn't set a respose status, null is returned to the web …
- 10:36 AM Ticket #31 (Changing list columns - list of visible columns becomes empty) created by
- Webpage: Experiments Step1.Select 'Default Columns' in the drop …
- 8:40 AM Ticket #18 (BioMaterialEvent.addSource and BioMaterialEvent.removeSource doesn't work) closed by
- fixed
- 8:37 AM Changeset [1843] by
- Fixed bug #18: BioMaterialEvent.addSource and …
- 8:36 AM Changeset [1842] by
- vertical align of td and th removed since it didn't work as intended
- 12:35 AM Changeset [1841] by
- Fixed latex to html translation.
Jan 25, 2006:
- 5:09 PM Ticket #25 (Changing information on how to get an account does not propagete to ...) updated by
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Status, Owner changed
The cause of this behaviour is that those settings are loaded into the … - 4:57 PM Changeset [1840] by
- Fixed most of bug #22: Server configuration. Setting unlimited with G …
- 4:56 PM Ticket #22 (Server configuration. Setting unlimited with G or Gb does not change ...) updated by
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Owner changed
i) Please clarify! Either there is a value OR the unlimited option is … - 4:12 PM Changeset [1839] by
- Protocol types now use the new list design
- 4:12 PM Changeset [1838] by
- Ordinal now gets a default value of 1, instead of 0 which is invalid.
- 4:04 PM Changeset [1837] by
- System items can no longer be deleted.
- 2:35 PM Ticket #30 (Preset is not removed from drop-downlist after it had been deleted) created by
- Experiments->Mangage(preset)->Delete a preset. The preset is not …
- 1:12 PM Changeset [1836] by
- Added date column and moved 'Run Plugin' button to the BioAssaySet view
- 11:58 AM Changeset [1835] by
- Removed meta-tag setting the character set. It doesn't work and was …
- 11:48 AM Changeset [1834] by
- Deleted unused jsp page
- 11:46 AM Changeset [1833] by
- Plate types and Plate event types now use the new list design
- 11:45 AM Changeset [1832] by
- Added 'delete' method to RemovableUtil
- 11:07 AM Changeset [1831] by
- If page taglib parameter title is null no title is written. This way …
- 11:05 AM Changeset [1830] by
- Added LIMIT values to user query
- 10:21 AM Changeset [1829] by
- Linked title breadcrumbs to their views
- 9:55 AM Changeset [1828] by
- Implemented restore functionality for bioassaysets in the analysis view
- 9:45 AM Ticket #29 (Filtering News on dates) created by
- Filter News on Start-, News- or End date There is nothing that …
- 8:47 AM Ticket #3 (Update doesn't create indexes) updated by
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Priority changed
- 8:46 AM Ticket #24 (Adding an administrator name with non-US characters looks strange) updated by
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Owner changed
This is probably a server configuration problem. The file … - 8:25 AM Changeset [1827] by
- Plate geometry now uses the new list design
- 7:47 AM Changeset [1826] by
- Fixed bug #17: ItemContext.configureQuery doesn't LEFT JOIN properties …
- 7:46 AM Ticket #17 (ItemContext.configureQuery doesn't LEFT JOIN properties with more than ...) closed by
- fixed
- 7:41 AM Changeset [1825] by
- Changed "Scan" to "Hybridization"
Jan 24, 2006:
- 4:45 PM Ticket #28 (Returning to mainpage from viewing all the news) created by
- It could be useful to have a way to get back to mainpage from the …
- 4:08 PM Changeset [1824] by
- ItemContext now LEFT JOIN:s filters if it is an association.
- 3:41 PM Ticket #27 (Analyze button in the experiment view) updated by
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Type changed
- 3:40 PM Ticket #27 (Analyze button in the experiment view) created by
- Add an "Analyze" button to the view experiment toolbar.
- 3:31 PM Changeset [1823] by
- Added Run Plugin button which uses the default plugin selection view
- 2:39 PM Changeset [1822] by
- First draft of Server configuration test.
- 2:38 PM Ticket #26 (Cannot navigate to page 1 on list pages) closed by
- fixed
- 2:38 PM Changeset [1821] by
- Fixed bug #26: Cannot navigate to page 1 on list pages
- 2:26 PM Changeset [1820] by
- Array designs and features now use the new list design
- 1:45 PM Changeset [1819] by
- Indexed rows and fixed starting level of tree
- 1:43 PM Changeset [1818] by
- Indexed rows and fixed starting level of tree
- 1:28 PM Ticket #25 (Changing information on how to get an account does not propagete to ...) updated by
-
Description changed
- 1:25 PM Ticket #26 (Cannot navigate to page 1 on list pages) created by
- If you have navigated to another page than page 1 it is not possible …
- 1:24 PM Ticket #25 (Changing information on how to get an account does not propagete to ...) created by
- Read this tickets short summary. Do the change, logout, try to click …
- 1:16 PM Ticket #24 (Adding an administrator name with non-US characters looks strange) created by
- Try adding "Jari Häkkinen" to the Administrator name in Server setting …
- 1:13 PM Ticket #23 (Apply button in popup windows?) created by
- It would be nice with an apply button in popups that pushes changes …
- 1:00 PM Ticket #22 (Server configuration. Setting unlimited with G or Gb does not change ...) created by
- i) Setting unlimited with G or Gb does not change value when saved. …
- 12:37 PM Changeset [1817] by
- Bioassaysets are now represented by a redish folder, should probably …
- 11:32 AM Ticket #21 (ProgressReporter in IntensityCalculatorUtil methods) created by
- Add a ProgressReporter parameter to …
- 11:32 AM Changeset [1816] by
- Renamed treeline images to lowercase
- 11:30 AM Changeset [1815] by
- Renamed treeLine to treeline
- 11:22 AM Changeset [1814] by
- Added dynamic analysis tree in the analysis view.
- 11:15 AM Changeset [1813] by
- Changed "Array batch" to new list design
- 10:30 AM Changeset [1812] by
- Changed "Array slides" to the new design
- 9:06 AM Changeset [1811] by
- Display annotations on "view item" page
- 8:46 AM Ticket #20 (Display and link to associated item from view page) created by
- When viewing a single item which has associations to other items, only …
- 8:43 AM Ticket #19 (Show/hide option for various section on a "view item" page) created by
- When viewing a single item, for example a hybridization, it should be …
- 8:16 AM Ticket #18 (BioMaterialEvent.addSource and BioMaterialEvent.removeSource doesn't work) created by
- If the "usedQuantity" parameter has been set to null for a source …
- 7:56 AM Changeset [1810] by
- Fixed NPE in Base.getAndSetCurrentContext if no "rowsperpage" …
Jan 23, 2006:
- 3:59 PM Changeset [1809] by
- Fixed problem with lists displaying all items if a negative …
- 3:42 PM Changeset [1808] by
- View hybridization page now lists labeled extracts
- 2:17 PM Changeset [1807] by
- Added "Today" button to calendar popup.
- 2:10 PM Changeset [1806] by
- Hybridizations now use the new list design
- 1:20 PM Ticket #17 (ItemContext.configureQuery doesn't LEFT JOIN properties with more than ...) updated by
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Status, Description changed
The same if true if we have a filter on that property. It will not … - 1:03 PM Changeset [1805] by
- Names of days now have three letters
- 12:16 PM Changeset [1804] by
- Removed debug alert message
- 11:57 AM Ticket #17 (ItemContext.configureQuery doesn't LEFT JOIN properties with more than ...) created by
- This results in queries which doesn't return any items with null …
- 11:33 AM Changeset [1803] by
- The new file manager has now fully replace the old one.
- 8:08 AM Changeset [1802] by
- Fixed vertical alignment of tables
Jan 21, 2006:
- 1:08 PM Changeset [1801] by
- Removed lots of unused imports.
Jan 20, 2006:
- 4:08 PM Changeset [1800] by
- Fixed some problems with loading proxies and many-to-any mapping in …
- 2:42 PM Changeset [1799] by
- TestSpotImages is now displaying spot images (was commented out since …
- 2:32 PM Changeset [1798] by
- The file manager is now working as a standalone part.
- 1:32 PM Changeset [1797] by
- Fixed bug where roles where not assigned due to a closed DbControl
- 11:12 AM Ticket #13 (Removing experiment while job exists leaves the job waiting indefinitly) closed by
- fixed: Fixed. The error is now reported in the same way as any other job …
- 11:11 AM Ticket #15 (DemoServer not working even for basic testing) closed by
- duplicate: Fixed some time ago. Shouldn't be a problem once the demo server is …
- 11:06 AM Changeset [1796] by
- Internal job queue no longer chokes on missing item parameters. …
- 10:38 AM Ticket #16 (Configurable link to Report a bug) created by
- The help meny has an item "Reporter a bug" which leads to a …
Jan 19, 2006:
- 8:48 PM Changeset [1795] by
- Removed lots of unused imports.
- 2:54 PM Changeset [1794] by
- Added File manager with the new list design. The old is still …
- 2:26 PM Changeset [1793] by
- PrintMapFlatFileImporter version1.0
- 12:11 PM Changeset [1792] by
- Inital infrastructure for test documents.
Jan 18, 2006:
- 5:33 PM Changeset [1791] by
- Plugin test updated. Analysis gui updated. Changed log4j properties …
- 4:50 PM Changeset [1790] by
- Handles sections correct
- 3:56 PM Changeset [1789] by
- The current context can now be passed on to plugins when configuring …
- 2:23 PM Changeset [1788] by
- Changed login page so that the encrypted password is sent in a hidden …
- 2:04 PM Changeset [1787] by
- Plugins can now use customized JSP pages. Test case with NullPlugin.
- 1:30 PM Ticket #15 (DemoServer not working even for basic testing) created by
- Seems to be serious serverside problems today 18.01.06. Trying to …
- 9:33 AM Changeset [1786] by
- Fixed vertical alignment
- 9:15 AM Ticket #14 (Viewing arrays throws error) closed by
- fixed: Changes cast of 'asc desc' to 'ASC DESC'.
- 9:07 AM Changeset [1785] by
- Fixed vertical alignment of column headers
- 8:59 AM Changeset [1784] by
- Fixed vertical alignment of messages
- 8:55 AM Changeset [1783] by
- TestJob.test_execute() returns infomation about axit status
- 8:30 AM Changeset [1782] by
- TestExperiment now cleans up and executes job immediately
- 8:29 AM Changeset [1781] by
- Reverted NullPlugin to previous state so we can test required parameters
Jan 17, 2006:
- 5:09 PM Changeset [1780] by
- Fixed bugs in test program related to the updated invokation routines
- 4:34 PM Changeset [1779] by
- Fixed bugs in test program related to the updated NullPlugin test plugin
- 1:08 PM Changeset [1778] by
- TestAll works again
- 11:59 AM Changeset [1777] by
- Changed to new design for Software, Hardware, Protocol and Experiment. …
Jan 16, 2006:
- 4:00 PM Changeset [1776] by
- Fixed validation bug on Edit scan page
- 3:05 PM Changeset [1775] by
- Changed "View / Scans" to the new page design Made many small changes …
- 12:51 PM Changeset [1774] by
- Cleaned up superfluous import statements and unused variables.
- 12:15 PM Changeset [1773] by
- Several minor changes to import user interface
- 11:28 AM Changeset [1772] by
- The web import interface should now be more robust and supports …
- 8:06 AM Changeset [1771] by
- removed update="false" from RawBioAssay.getRawDataType
Jan 13, 2006:
- 6:16 PM Ticket #14 (Viewing arrays throws error) created by
- org.jdom.input.JDOMParseException on page …
- 5:15 PM Changeset [1770] by
- Errors and commands are now handeled by create_root_bioassayset.jsp …
- 4:01 PM Changeset [1769] by
- It is now possible to create spot images through the web interface
- 3:04 PM Changeset [1768] by
- Intensities are now done with the IntensityCalculatorPlugin
- 2:47 PM Changeset [1767] by
- Added IntensityCalculationPlugin test
- 1:39 PM Changeset [1766] by
- Fixed a bug that caused it to be impossible to create and set …
- 12:09 PM Changeset [1765] by
- A first version of View / Raw bioassays with the new design is now working
- 11:42 AM Ticket #13 (Removing experiment while job exists leaves the job waiting indefinitly) created by
- If you manage to remove an experiment while a waiting job exists the …
- 11:16 AM Changeset [1764] by
- Fixed nullPointerException when creating a Job without a …
Jan 12, 2006:
- 3:12 PM Changeset [1763] by
- Moved the job ID to the ParmeterValues object.
- 3:00 PM Changeset [1762] by
- The ID of the current job is now available to an executing plugin.
- 2:51 PM Changeset [1761] by
- Fixed bug in Job that caused it to loose information about which …
- 2:05 PM Changeset [1760] by
- List page now warns when there are hidden columsn with a filter
- 12:24 PM Changeset [1759] by
- Plugin configuration now supports item and file parameters
- 9:36 AM Ticket #12 (Plugin configuration forgets parameter values) created by
- If there is an error in one or more parameters when configuring a …
- 9:31 AM Changeset [1758] by
- Fixed some of the remaining issues in plugin configuration
Jan 11, 2006:
- 9:23 PM Tickets #5,11,4,6,7 batch updated by
-
Milestone changed
Milestone beta1 deleted - 9:23 PM Ticket #1 (column names in flatfile parser) updated by
-
Milestone changed
- 9:22 PM Ticket #8 (PrintMapBlockFileImporter) updated by
-
Milestone changed
- 9:05 PM Changeset [1757] by
- Replaced the list box with a more fance div-tagged list
- 3:10 PM Changeset [1756] by
- The start of a new and improved look for configure plugin
- 2:06 PM Changeset [1755] by
- Error message now doesn't resize a popup window to a smaller size …
- 1:32 PM Changeset [1754] by
- Plugin configuration can now handle long, float, double, boolean and …
Jan 10, 2006:
- 8:20 PM Changeset [1753] by
- Updated development status
- 8:17 PM Changeset [1752] by
- Fixed Internet explorer bug.
- 8:17 PM Changeset [1751] by
- Bug fix for certain database dialects
- 3:53 PM Changeset [1750] by
- First step of plugin configuration is now working
- 9:48 AM Changeset [1749] by
- Manage contexts is now working
Jan 9, 2006:
- 4:15 PM Changeset [1748] by
- Added additional requirements specifications
- 4:12 PM Changeset [1747] by
- Removing old design and updating status
- 4:10 PM Changeset [1746] by
- Added Images and Files section and updated Plates section
- 4:08 PM Changeset [1745] by
- Cleaned up comments
- 4:07 PM Changeset [1744] by
- First prototype for manage contexts
- 3:38 PM Changeset [1743] by
- PresetSelector should not show "Owned by others" option for …
- 1:57 PM Changeset [1742] by
- Added prototype analysis
- 1:17 PM Changeset [1741] by
- Alpha 6 was release 2005-12-21 not 2005-09-09
- 1:13 PM Changeset [1740] by
- Fixed bug that made it impossible to view other pages but the first in …
- 1:00 PM Changeset [1739] by
- Added "Edit" images
- 12:12 PM Changeset [1738] by
- View / Reporters should now be more or less functional
Jan 4, 2006:
- 10:16 AM Changeset [1737] by
- Added a sequence diagram describing a general transfer
Jan 3, 2006:
- 4:59 PM Changeset [1736] by
- Added operations to most top classes
- 4:24 PM Changeset [1735] by
- Initial revision of umbrello design
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