Timeline
Sep 30, 2005:
- 3:47 PM Changeset [1395] by
- Updated Dynamic API diagrams
- 1:31 PM Changeset [1394] by
- Added Dynamic API documentation for filtering workflow example and …
Sep 29, 2005:
- 3:59 PM Changeset [1393] by
- Added Dynamic API documentation for inserting data
- 2:52 PM Changeset [1392] by
- Added Dynamic API documentation for inserting data and workflow …
- 11:41 AM Changeset [1391] by
- Added data layer documentation for dynamic database Added skeleton for …
Sep 28, 2005:
- 4:02 PM Changeset [1390] by
- Updated experiments design - it is looking good!
- 8:00 AM Changeset [1389] by
- Changes SUN to Sun Microsystems
- 8:00 AM Changeset [1388] by
- Fixed ant test so JarPlugin.jar is built correctly
Sep 27, 2005:
- 4:18 PM Changeset [1387] by
- Added common_item_toolbar.jpg
- 4:18 PM Changeset [1386] by
- Added popup screenshots
- 4:17 PM Changeset [1385] by
- Adding useCases for working with plates and removing the Administrator …
- 4:10 PM Changeset [1384] by
- Next version of dynamic database
- 1:26 PM Changeset [1383] by
- Added About dialog to web client
- 12:04 PM Changeset [1382] by
- Added plugin types admin
Sep 26, 2005:
- 4:00 PM Changeset [1381] by
- Initial revision
Sep 23, 2005:
- 4:02 PM Changeset [1380] by
- Updated because core API has changed
- 4:02 PM Changeset [1379] by
- Added two new getQuery methods to PluginDefinition and PluginConfiguration
- 10:36 AM Changeset [1378] by
- TestSpotImages now create red/blue instead of red/green images
Sep 22, 2005:
- 3:31 PM Changeset [1377] by
- Added PluginType and test program for it: TestPluginType, …
- 1:50 PM Changeset [1376] by
- Implemented changes in plugin system. Added InteractivePlugin interface.
- 9:51 AM Changeset [1375] by
- Added version information to Application
Sep 21, 2005:
- 8:37 PM Changeset [1374] by
- Updated devlopment status
- 4:05 PM Changeset [1373] by
- Install creates entry for AutoDetectingImporter Added cache settings …
- 3:51 PM Changeset [1372] by
- Minor redesign of plugin system Added PluginTypeData
- 12:02 PM Changeset [1371] by
- Fixed basd links in development ideas document
- 12:01 PM Changeset [1370] by
- Moved development ideas document to the /doc/development directory
- 12:00 PM Changeset [1369] by
- Updated development ideas document
- 11:46 AM Changeset [1368] by
- Added raw data headers to RawBioAssay
- 11:05 AM Changeset [1367] by
- Added list of development ideas
- 10:56 AM Changeset [1366] by
- New version of experiments and analysis schema Added ReporterList to …
- 9:04 AM Changeset [1365] by
- Using getExistingFile and fixed unattached files
- 9:04 AM Changeset [1364] by
- Renaming getNewOrExistingFile to getExistingFile
- 9:03 AM Changeset [1363] by
- Using true id for fileNameToIdMap
- 9:02 AM Changeset [1362] by
- Fixed problem with unattached files
Sep 20, 2005:
- 8:11 PM Changeset [1361] by
- Updated development status
- 4:04 PM Changeset [1360] by
- First version of UML for Experiments
- 3:00 PM Changeset [1359] by
- Added more progress reporting to Install
- 11:26 AM Changeset [1358] by
- Using transferFile directly when file is created
- 11:01 AM Changeset [1357] by
- Using transferFile directly when file is created
- 10:55 AM Changeset [1356] by
- Added transferFile(file, theBase1File) to FileTransfer. …
- 10:09 AM Changeset [1355] by
- Added ChainedProgressReporter which makes initdb more natural
- 10:06 AM Changeset [1354] by
- ant dist failed because a file was missing
- 8:17 AM Changeset [1353] by
- Allowed an application to unload and reload plugin information
Sep 19, 2005:
- 1:11 PM Changeset [1352] by
- createItem is done though channel and UseForJPG columns are not used
- 1:10 PM Changeset [1351] by
- createItem method is now protected
- 1:10 PM Changeset [1350] by
- Added a new sessionControl used when impersonating a user
- 1:09 PM Changeset [1349] by
- Added createDirectory method
- 1:06 PM Changeset [1348] by
- Added a new sessionControl used when impersonating a user
- 12:55 PM Changeset [1347] by
- Set the parent class loader in JarClassLoader to the current threads …
- 11:48 AM Changeset [1346] by
- Fixed NPE in ReporterMapFlatFileImporter
- 11:43 AM Changeset [1345] by
- JarClassLoader follows manifest classpath and implements findResource
Sep 15, 2005:
- 3:57 PM Changeset [1344] by
- PluginDefinition now uses JarClassLoader
- 3:38 PM Changeset [1343] by
- Added JarClassLoader and test program
- 1:12 PM Changeset [1342] by
- Added plugin definitions admin
Sep 14, 2005:
- 1:03 AM Changeset [1341] by
- HTMLized and improved installation instructions. Added information …
Sep 13, 2005:
- 8:32 PM Changeset [1340] by
- Added link to download source for alpha5.
Sep 12, 2005:
- 4:01 PM Changeset [1339] by
- 4:00 PM Changeset [1338] by
- Documenting
- 4:00 PM Changeset [1337] by
- Initial revision
- 2:41 PM Changeset [1336] by
- Added includeScan
- 2:41 PM Changeset [1335] by
- Documenting
- 2:41 PM Changeset [1334] by
- Initial revision of ScanTransfer. Modified Migrater to include …
- 10:39 AM Changeset [1333] by
- Documenting
- 10:32 AM Changeset [1332] by
- Documenting
- 10:21 AM Changeset [1331] by
- Documenting
- 10:19 AM Changeset [1330] by
- Removed mapProtocolsToFiles() method and added documentation
Sep 9, 2005:
- 8:28 PM Changeset [1329] by
- Fixed bad link to installation document
- 4:40 PM Changeset [1328] by
- 2:14 PM Changeset [1327] by
- The alpha 5 release
- 2:07 PM Changeset [1326] by
- Released Base 2.0 alpha 5!!!!
- 2:04 PM Changeset [1325] by
- Documenting
- 2:03 PM Changeset [1324] by
- Added getPlateTypeById and documenting
- 1:56 PM Changeset [1323] by
- ant dist now takes the correct base.config file
- 1:51 PM Changeset [1322] by
- Updated installation instructions
- 1:47 PM Changeset [1321] by
- Added TODO note for jarPath
- 1:44 PM Changeset [1320] by
- LabeledExtract now also sets Extract. Added getExtractById in …
- 1:25 PM Changeset [1319] by
- MappedPlates are working now
- 1:21 PM Changeset [1318] by
- Added migration instructions
- 1:10 PM Changeset [1317] by
- Activiated file removal
- 11:06 AM Changeset [1316] by
- Added dist.migrate to ant dist
- 11:01 AM Changeset [1315] by
- Documenting
- 11:01 AM Changeset [1314] by
- createItem is now protected
- 11:00 AM Changeset [1313] by
- Added installation instructions based on the old instructions for the …
- 10:47 AM Changeset [1312] by
- ReporterBatcher now evicts reporters returned by exists and getByExternalId
- 10:34 AM Changeset [1311] by
- The PluginRequest returned by Job.execute() now update the status of …
- 9:00 AM Changeset [1310] by
- Status update 2005-09-08
Sep 8, 2005:
- 7:02 PM Changeset [1309] by
- ReporterMap test
- 4:47 PM Changeset [1308] by
- Documenting
- 4:41 PM Changeset [1307] by
- Documenting
- 4:34 PM Changeset [1306] by
- Adding getProtocolTypeById and getPlateTypeById and documenting
- 4:22 PM Changeset [1305] by
- Documenting
- 4:21 PM Changeset [1304] by
- Documenting
- 3:44 PM Changeset [1303] by
- Fixing bug for reporterId and wellId's
- 3:43 PM Changeset [1302] by
- Changing createItem method to protected
- 3:43 PM Changeset [1301] by
- Moving null value check into saveItem() in run() method
- 3:42 PM Changeset [1300] by
- Documenting
- 3:40 PM Changeset [1299] by
- Fixed bug where properties in ArrayDesignBlock:s didn't get updated
- 3:23 PM Changeset [1298] by
- Fixed javadoc warnings
- 2:34 PM Changeset [1297] by
- 1:33 PM Changeset [1296] by
- Documenting
- 1:01 PM Changeset [1295] by
- Documenting
- 12:49 PM Changeset [1294] by
- Added success parameter to AbstractFlatFileImporter.end() method
- 12:42 PM Changeset [1293] by
- Changed TestReporter to display other columns.
- 12:31 PM Changeset [1292] by
- Added "Update existing reporter" option to ReporterFlatFileParser
- 12:07 PM Changeset [1291] by
- Documenting
- 12:02 PM Changeset [1290] by
- Added ConsoleProgressReporter and updated test programs to use it
- 11:30 AM Changeset [1289] by
- Fixed bug in FlatFileParser
- 11:28 AM Changeset [1288] by
- Fixing setArraySlide for Hybridizations
- 11:27 AM Changeset [1287] by
- Fixing log output in the select method
- 11:20 AM Changeset [1286] by
- Fixed ant dist to include documentation, etc.
- 10:41 AM Changeset [1285] by
- Added JDOM
- 10:39 AM Changeset [1284] by
- Added license texts and information about 3:rd-party components
- 10:35 AM Changeset [1283] by
- Fixed new call to BlockInfo
- 10:08 AM Changeset [1282] by
- Fixed new call to BlockInfo
- 10:05 AM Changeset [1281] by
- Removing PhysicalFileTransfer.java
- 10:03 AM Changeset [1280] by
- ArrayDesignTransfer now seems to work, transferring the basic data
- 10:01 AM Changeset [1279] by
- Added getReporterById() method
- 10:00 AM Changeset [1278] by
- Added a few columns to the sql query
- 9:59 AM Changeset [1277] by
- Added getPlateById() method
- 9:58 AM Changeset [1276] by
- Added getMaxId() method
- 9:35 AM Changeset [1275] by
- Added support for min and max data columns parameters to …
Sep 7, 2005:
- 5:17 PM Changeset [1274] by
- ReporterMap importer added
- 3:57 PM Changeset [1273] by
- Added LineType enum to FlatFileParser instead of using int constants
- 3:28 PM Changeset [1272] by
- Added more constructors to ParameterType:s
- 2:12 PM Changeset [1271] by
- Initial revision
- 1:33 PM Changeset [1270] by
- Documented Abstract- and ReporterFlatFileImporter.
- 12:27 PM Changeset [1269] by
- Added AbstractPlugin.validateRequestParameters and javadoc
- 11:45 AM Changeset [1268] by
- Fixed bad image
- 11:29 AM Changeset [1267] by
- Added Plugin.getItems() method and changed about() and type() to …
- 9:06 AM Changeset [1266] by
- Fixed problem with ItemParameterValue mapping
Sep 6, 2005:
- 8:41 PM Changeset [1265] by
- Fixed a NPE in ReporterFlatFileImporter Added better constructors to …
- 4:53 PM Changeset [1264] by
- Test job
- 4:11 PM Changeset [1263] by
- Added import of extended columns to ReporterFlatFileImporter
- 4:06 PM Changeset [1262] by
- Removing verifyMappedIds()
- 4:00 PM Changeset [1261] by
- Saving arrayDesign before adding block
- 3:50 PM Changeset [1260] by
- Adding uggly fix to the problem of missing items from queries
- 2:44 PM Changeset [1259] by
- Cleaning up requirements section
- 2:17 PM Changeset [1258] by
- Test reporter import now delete it's job
- 2:07 PM Changeset [1257] by
- create and delete in TestJob
- 1:49 PM Changeset [1256] by
- ReporterFlatFileImporter now has a working skeleton. Added test class.
- 1:47 PM Changeset [1255] by
- Fixed dependency check
- 1:02 PM Changeset [1254] by
- Adding createItem and getPlateList
- 11:12 AM Changeset [1253] by
- added ProgressReporter parameter to Job.execute()
- 11:08 AM Changeset [1252] by
- added ProgressReporter parameter to Job.execute()
- 11:00 AM Changeset [1251] by
- Plugin configuratin is tested
- 10:29 AM Changeset [1250] by
- Documenting
- 10:28 AM Changeset [1249] by
- Initial revision of ArraySlide and ArrayBatchTransfer
- 9:53 AM Changeset [1248] by
- ReporterFlatFileImporter is now ready to be tested
- 9:34 AM Changeset [1247] by
- added throws baseexception in the interface
Sep 5, 2005:
- 8:34 PM Changeset [1246] by
- Removing @author statements from methods
- 7:50 PM Changeset [1245] by
- Adding dependency checking
- 4:09 PM Changeset [1244] by
- Readded AbstractFlatFileImporter and ReporterFlatFileImporter.
- 3:56 PM Changeset [1243] by
- added the build folder to svn:ignore
- 3:53 PM Changeset [1242] by
- PluginDefinition tested
- 3:40 PM Changeset [1241] by
- id tag updated
- 3:38 PM Changeset [1240] by
- NullPlugin created
- 2:14 PM Changeset [1239] by
- AbstractPlugin created
- 1:57 PM Changeset [1238] by
- Implemented core part of the plugin system
- 1:42 PM Changeset [1237] by
- Adding SampleTissue
- 12:11 PM Changeset [1236] by
- Documenting
- 12:10 PM Changeset [1235] by
- Initial revision
- 12:09 PM Changeset [1234] by
- Initial revision
- 12:08 PM Changeset [1233] by
- Renamming getSelects to countRows
- 11:56 AM Changeset [1232] by
- Documenting
- 11:55 AM Changeset [1231] by
- Documenting
- 11:54 AM Changeset [1230] by
- Documenting
- 11:54 AM Changeset [1229] by
- Documenting
- 11:53 AM Changeset [1228] by
- Using setCommonData
- 11:53 AM Changeset [1227] by
- Documenting
- 11:52 AM Changeset [1226] by
- Documenting
- 11:36 AM Changeset [1225] by
- Using incode class in quickstart
- 11:24 AM Changeset [1224] by
- Adding requirements and clarifying quickstart
- 11:21 AM Changeset [1223] by
- Documenting
- 9:49 AM Changeset [1222] by
- Documenting
- 9:27 AM Changeset [1221] by
- Fixing stop call
- 9:26 AM Changeset [1220] by
- Documenting
- 9:02 AM Changeset [1219] by
- Removed PluginJobData and made JobData have a type and optional …
- 8:49 AM Changeset [1218] by
- Documenting
- 8:23 AM Changeset [1217] by
- Set MappedPlates to no, it's not working properly
- 8:01 AM Changeset [1216] by
- Added ArrayBatch- and ArrayDesignTransfer classes
Sep 2, 2005:
- 5:05 PM Changeset [1215] by
- getters in About
- 5:03 PM Changeset [1214] by
- updated plugin design
- 4:51 PM Changeset [1213] by
- just a small syntax update
- 4:04 PM Changeset [1212] by
- Begin implementation of new plugin system
- 3:55 PM Changeset [1211] by
- updated plugin design
- 1:56 PM Changeset [1210] by
- Initial revision
- 1:56 PM Changeset [1209] by
- Including Array*
- 1:54 PM Changeset [1208] by
- Bug fix, Protocols do not have to have a file associated to them
- 1:54 PM Changeset [1207] by
- Adding ArrayBatch and ArrayDesign Transfer
- 1:53 PM Changeset [1206] by
- Initial revision
- 1:50 PM Changeset [1205] by
- New design of the plugin system
- 1:25 PM Changeset [1204] by
- updated plugin design
- 1:04 PM Changeset [1203] by
- Fixing bug in chown
- 1:03 PM Changeset [1202] by
- Saving file within createItem
- 1:03 PM Changeset [1201] by
- Added some logging
- 1:02 PM Changeset [1200] by
- Using DELIMITER for separation of data in the description
- 1:01 PM Changeset [1199] by
- Commenting
- 1:01 PM Changeset [1198] by
- Nicer tissue string
- 1:00 PM Changeset [1197] by
- Only transfer files that are of size 0
- 1:00 PM Changeset [1196] by
- Added filechecking through md5
- 12:59 PM Changeset [1195] by
- Added a PhysicalFileTransfer after UploadTransfer is done
- 12:58 PM Changeset [1194] by
- Initial revision
- 11:49 AM Changeset [1193] by
- Plates are now destroyed after transfer
Sep 1, 2005:
- 1:40 PM Changeset [1192] by
- Added missing parameter types and renamed TextParameterType to …
- 1:30 PM Changeset [1191] by
- Removed unneccessary code from Type
- 1:23 PM Changeset [1190] by
- Changed ParameterType (and subclasses) to use the new Values class. …
- 12:23 PM Changeset [1189] by
- removed value is now set
- 11:11 AM Changeset [1188] by
- Added Values class and made Annotation and AnnotationType use it.
- 10:31 AM Changeset [1187] by
- Removing TODO comments
- 8:57 AM Changeset [1186] by
- Updated development status. Made Parameters (9) and Plugins execution …
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