Timeline



Oct 21, 2011:

2:48 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5819]) References #1590: Documentation cleanup The chapter about …
2:48 PM Changeset [5819] by Nicklas Nordborg
References #1590: Documentation cleanup The chapter about writing …
1:15 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5818]) References #1590: Documentation cleanup Some more …
1:15 PM Changeset [5818] by Nicklas Nordborg
References #1590: Documentation cleanup Some more sections in the …
8:27 AM Ticket #1638 (Add support for 'between' operator in list pages) closed by Nicklas Nordborg
fixed: (In [5817]) Fixes #1638: Add support for 'between' operator in list pages
8:27 AM Changeset [5817] by Nicklas Nordborg
Fixes #1638: Add support for 'between' operator in list pages

Oct 20, 2011:

2:36 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5816]) References #1590: Documentation cleanup 3 chapters in the …
2:36 PM Changeset [5816] by Nicklas Nordborg
References #1590: Documentation cleanup 3 chapters in the Developer …
2:06 PM Ticket #1639 (Add support for unpacking *.gz and *.bz2 files that are not tar-ed ...) created by Nicklas Nordborg
This should now be possible to implement since #978 has been fixed and …
1:31 PM Ticket #1575 (Add support for authenticator plug-in in external JAR files) updated by Nicklas Nordborg
Milestone changed
Moving this to 3.0 since I think #1599 will not happen in the near future.
11:40 AM Ticket #1638 (Add support for 'between' operator in list pages) created by Nicklas Nordborg
It would be useful to filter on date and numerical columns for values …

Oct 18, 2011:

1:48 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5815]) References #1590: Documentation cleanup New screenshots …
1:48 PM Changeset [5815] by Nicklas Nordborg
References #1590: Documentation cleanup New screenshots and some …
1:47 PM Ticket #1597 (Subtypes of items) updated by Nicklas Nordborg
(In [5814]) References #1597: Subtypes of items Validation rules for …
1:46 PM Changeset [5814] by Nicklas Nordborg
References #1597: Subtypes of items Validation rules for "project …
11:24 AM Ticket #1613 (Extend the 'roles' test case with some sequence-related tests) closed by Nicklas Nordborg
fixed
11:24 AM Ticket #1613 (Extend the 'roles' test case with some sequence-related tests) updated by Nicklas Nordborg
(In [5813]) References #1613: Extend the 'roles' test case with some …
11:24 AM Changeset [5813] by Nicklas Nordborg
References #1613: Extend the 'roles' test case with some …

Oct 17, 2011:

4:19 PM Ticket #1629 (Use <label> instead of javascript for text associated with radio buttons) closed by Nicklas Nordborg
fixed: (In [5812]) Fixes #1629: Use <label> instead of javascript for text …
4:19 PM Changeset [5812] by Nicklas Nordborg
Fixes #1629: Use <label> instead of javascript for text associated …
11:48 AM Ticket #1629 (Use <label> instead of javascript for text associated with radio buttons) updated by Nicklas Nordborg
Status, Owner changed
11:19 AM Ticket #1628 (Use :hover instead of onMouseEnter/onMouseLeave) closed by Nicklas Nordborg
fixed: (In [5811]) Fixes #1628: Use :hover instead of …
11:19 AM Changeset [5811] by Nicklas Nordborg
Fixes #1628: Use :hover instead of onMouseEnter/onMouseLeave * …
10:45 AM Ticket #1628 (Use :hover instead of onMouseEnter/onMouseLeave) updated by Nicklas Nordborg
(In [5810]) References #1628: Use :hover instead of …
10:45 AM Changeset [5810] by Nicklas Nordborg
References #1628: Use :hover instead of onMouseEnter/onMouseLeave …
10:38 AM Ticket #1628 (Use :hover instead of onMouseEnter/onMouseLeave) updated by Nicklas Nordborg
(In [5809]) References #1628: Use :hover instead of …
10:38 AM Changeset [5809] by Nicklas Nordborg
References #1628: Use :hover instead of onMouseEnter/onMouseLeave …
9:15 AM Ticket #1628 (Use :hover instead of onMouseEnter/onMouseLeave) updated by Nicklas Nordborg
(In [5808]) References #1628: Use :hover instead of …
9:15 AM Changeset [5808] by Nicklas Nordborg
References #1628: Use :hover instead of onMouseEnter/onMouseLeave …
7:26 AM Ticket #1628 (Use :hover instead of onMouseEnter/onMouseLeave) updated by Nicklas Nordborg
Owner, Status changed

Oct 14, 2011:

3:08 PM Ticket #1153 (Handling short read transcript sequence data) updated by Nicklas Nordborg
(In [5807]) References #1153: Handling short read transcript sequence …
3:08 PM Changeset [5807] by Nicklas Nordborg
References #1153: Handling short read transcript sequence data Lots …

Oct 12, 2011:

3:33 PM DeveloperInformation edited by Nicklas Nordborg
(diff)
3:11 PM DeveloperInformation edited by Nicklas Nordborg
Releasing BASE 3.0-beta (diff)
3:10 PM WikiStart edited by Nicklas Nordborg
Releasing BASE 3.0-beta (diff)
3:09 PM DownloadPage edited by Nicklas Nordborg
Releasing BASE 3.0-beta (diff)
2:59 PM Changeset [5806] by Nicklas Nordborg
Tagging version 3.0-beta
2:56 PM Changeset [5805] by Nicklas Nordborg
Preparing release 3.0-beta.
2:45 PM Changeset [5804] by Nicklas Nordborg
Fixes an issue where a job agent may have trouble to determine if an …
2:00 PM Ticket #1591 (Upgrade script for BASE 2.17 --> 3.0) updated by Nicklas Nordborg
Description changed
1:59 PM Ticket #1591 (Upgrade script for BASE 2.17 --> 3.0) updated by Nicklas Nordborg
(In [5803]) References #1591: Upgrade script for BASE 2.17 --> 3.0 …
1:59 PM Changeset [5803] by Nicklas Nordborg
References #1591: Upgrade script for BASE 2.17 --> 3.0 Handle project …
1:54 PM Ticket #1603 (Developers migration guide) closed by Nicklas Nordborg
fixed: (In [5802]) Fixes #1603: Developers migration guide Can't think of …
1:54 PM Changeset [5802] by Nicklas Nordborg
Fixes #1603: Developers migration guide Can't think of any more major …
1:47 PM Ticket #1603 (Developers migration guide) updated by Nicklas Nordborg
Description changed
1:26 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5801]) References #1590: Documentation cleanup New and updated …
1:26 PM Changeset [5801] by Nicklas Nordborg
References #1590: Documentation cleanup New and updated screenshots …
11:21 AM Ticket #1637 (Test BASE with PostgreSQL 9) created by Nicklas Nordborg
11:19 AM Ticket #1636 (Test BASE with Tomcat 7) created by Nicklas Nordborg
Check if BASE works with Tomcat 7 and if not, see if we can fix any …
11:18 AM Ticket #1635 (Test BASE with Java 7) created by Nicklas Nordborg
It has been a couple of months since Java 7 was released. I think we …
11:10 AM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5800]) References #1590: Documentation cleanup New and updated …
11:10 AM Changeset [5800] by Nicklas Nordborg
References #1590: Documentation cleanup New and updated screenshots …
9:52 AM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5799]) References #1590: Documentation cleanup * Homepage …
9:52 AM Changeset [5799] by Nicklas Nordborg
References #1590: Documentation cleanup * Homepage screenshot was …

Oct 11, 2011:

6:32 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5798]) References #1590: Documentation cleanup New and updated …
6:32 PM Changeset [5798] by Nicklas Nordborg
References #1590: Documentation cleanup New and updated screenshots …
2:55 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5797]) References #1590: Documentation cleanup New and updated …
2:55 PM Changeset [5797] by Nicklas Nordborg
References #1590: Documentation cleanup New and updated screenshots …

Oct 10, 2011:

1:38 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5796]) References #1590: Documentation cleanup New and updated …
1:38 PM Changeset [5796] by Nicklas Nordborg
References #1590: Documentation cleanup New and updated screenshots …
12:08 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5795]) References #1590: Documentation cleanup New and updated …
12:08 PM Changeset [5795] by Nicklas Nordborg
References #1590: Documentation cleanup New and updated screenshots …

Oct 7, 2011:

2:52 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5794]) References #1590: Documentation cleanup New and updated …
2:52 PM Changeset [5794] by Nicklas Nordborg
References #1590: Documentation cleanup New and updated screenshots …
2:51 PM Ticket #1634 (All external files are created in the root directory) closed by Nicklas Nordborg
fixed: (In [5793]) Fixes #1634: All external files are created in the root …
2:51 PM Changeset [5793] by Nicklas Nordborg
Fixes #1634: All external files are created in the root directory …
2:29 PM Ticket #1634 (All external files are created in the root directory) created by Nicklas Nordborg
Go to the filemanager in a BASE installation and navigate to a …
1:14 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5792]) References #1590: Documentation cleanup New and updated …
1:14 PM Changeset [5792] by Nicklas Nordborg
References #1590: Documentation cleanup New and updated screenshots …
10:55 AM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5791]) References #1590: Documentation cleanup * New icons for …
10:55 AM Changeset [5791] by Nicklas Nordborg
References #1590: Documentation cleanup * New icons for tip, note, …

Oct 6, 2011:

3:50 PM Ticket #1626 (Center-align text on buttons) updated by Nicklas Nordborg
(In [5790]) References #1626: Center-align text on buttons Using …
3:50 PM Changeset [5790] by Nicklas Nordborg
References #1626: Center-align text on buttons Using leftaligned …
3:49 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5789]) References #1590: Documentation cleanup New screenshots …
3:49 PM Changeset [5789] by Nicklas Nordborg
References #1590: Documentation cleanup New screenshots for chapter 4 …
1:05 PM Ticket #1613 (Extend the 'roles' test case with some sequence-related tests) updated by Nicklas Nordborg
(In [5788]) References #1613: Extend the 'roles' test case with some …
1:05 PM Changeset [5788] by Nicklas Nordborg
References #1613: Extend the 'roles' test case with some …
1:02 PM Ticket #1624 (Create array design (feature) importer for GTF files) updated by Nicklas Nordborg
(In [5787]) References #1624: Create array design (feature) importer …
1:02 PM Changeset [5787] by Nicklas Nordborg
References #1624: Create array design (feature) importer for GTF files …
1:00 PM Ticket #1597 (Subtypes of items) updated by Nicklas Nordborg
(In [5786]) References #1597: Subtypes of items Only check for WRITE …
1:00 PM Changeset [5786] by Nicklas Nordborg
References #1597: Subtypes of items Only check for WRITE permission …

Oct 5, 2011:

2:53 PM Ticket #1597 (Subtypes of items) updated by Nicklas Nordborg
(In [5785]) References #1597: Subtypes of items Parts of the subtype …
2:53 PM Changeset [5785] by Nicklas Nordborg
References #1597: Subtypes of items Parts of the subtype …
2:52 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5784]) References #1590: Documentation cleanup Import and export …
2:52 PM Changeset [5784] by Nicklas Nordborg
References #1590: Documentation cleanup Import and export of data.
12:34 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5783]) References #1590: Documentation cleanup Experiments and …
12:34 PM Changeset [5783] by Nicklas Nordborg
References #1590: Documentation cleanup Experiments and analysis chapter.

Oct 4, 2011:

3:43 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5782]) References #1590: Documentation cleanup Restructured …
3:43 PM Changeset [5782] by Nicklas Nordborg
References #1590: Documentation cleanup Restructured documentation to …
2:00 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5781]) References #1590: Documentation cleanup Moved "Internals …
2:00 PM Changeset [5781] by Nicklas Nordborg
References #1590: Documentation cleanup Moved "Internals of the Core …
1:01 PM Ticket #1590 (Documentation cleanup) updated by Nicklas Nordborg
(In [5780]) References #1590: Documentation cleanup Updated developer …
1:01 PM Changeset [5780] by Nicklas Nordborg
References #1590: Documentation cleanup Updated developer …

Sep 30, 2011:

2:37 PM Ticket #1613 (Extend the 'roles' test case with some sequence-related tests) updated by Nicklas Nordborg
(In [5779]) References #1613: Extend the 'roles' test case with some …
2:37 PM Changeset [5779] by Nicklas Nordborg
References #1613: Extend the 'roles' test case with some …
2:00 PM Ticket #1613 (Extend the 'roles' test case with some sequence-related tests) updated by Nicklas Nordborg
(In [5778]) References #1613: Extend the 'roles' test case with some …
2:00 PM Changeset [5778] by Nicklas Nordborg
References #1613: Extend the 'roles' test case with some …
1:34 PM Ticket #1592 (Unified installation procedure for plug-ins, extensions and more...) updated by Nicklas Nordborg
(In [5777]) References #1592: Unified installation procedure for …
1:34 PM Changeset [5777] by Nicklas Nordborg
References #1592: Unified installation procedure for plug-ins, …
1:28 PM Ticket #1633 (NumberFormatException when parsing NaN values) closed by Nicklas Nordborg
fixed: (In [5776]) Fixes #1633: NumberFormatException when parsing NaN values
1:28 PM Changeset [5776] by Nicklas Nordborg
Fixes #1633: NumberFormatException when parsing NaN values
12:55 PM Ticket #1633 (NumberFormatException when parsing NaN values) created by Nicklas Nordborg
This was fixed a long time ago by ticket #708 for one case, but not …
9:44 AM Ticket #1592 (Unified installation procedure for plug-ins, extensions and more...) updated by Nicklas Nordborg
(In [5775]) References #1592: Unified installation procedure for …
9:44 AM Changeset [5775] by Nicklas Nordborg
References #1592: Unified installation procedure for plug-ins, …

Sep 29, 2011:

3:38 PM Ticket #1625 (GAL exporter is only usable for array design that use COORDINATES for ...) closed by Nicklas Nordborg
fixed: (In [5774]) Fixes #1625: GAL exporter is only usable for array design …
3:38 PM Changeset [5774] by Nicklas Nordborg
Fixes #1625: GAL exporter is only usable for array design that use …
3:31 PM Ticket #1591 (Upgrade script for BASE 2.17 --> 3.0) updated by Nicklas Nordborg
Description changed
3:27 PM Ticket #1153 (Handling short read transcript sequence data) updated by Nicklas Nordborg
(In [5773]) References #1153: Handling short read transcript sequence …
3:14 PM Ticket #1152 (Improve transaction handling in Base1PluginExecuter) updated by Nicklas Nordborg
(In [5773]) References #1152: Handling short read transcript sequence …
3:14 PM Changeset [5773] by Nicklas Nordborg
References #1152: Handling short read transcript sequence data * …
2:15 PM Ticket #1624 (Create array design (feature) importer for GTF files) updated by Nicklas Nordborg
(In [5772]) References #1624: Create array design (feature) importer …
2:15 PM Changeset [5772] by Nicklas Nordborg
References #1624: Create array design (feature) importer for GTF files …
1:48 PM Ticket #1624 (Create array design (feature) importer for GTF files) updated by Nicklas Nordborg
(In [5771]) References #1624: Create array design (feature) importer …
1:48 PM Changeset [5771] by Nicklas Nordborg
References #1624: Create array design (feature) importer for GTF files …
1:27 PM Ticket #1623 (Create reporter importer for GTF files) updated by Nicklas Nordborg
(In [5770]) References #1623: Create reporter importer for GTF files …
1:27 PM Changeset [5770] by Nicklas Nordborg
References #1623: Create reporter importer for GTF files The default …
10:44 AM Ticket #1632 (NullPointerException when using JEP mapping for column with string values) closed by Nicklas Nordborg
fixed: (In [5769]) Fixes #1632: NullPointerException when using JEP mapping …
10:44 AM Changeset [5769] by Nicklas Nordborg
Fixes #1632: NullPointerException when using JEP mapping for column …
10:29 AM Ticket #1632 (NullPointerException when using JEP mapping for column with string values) created by Nicklas Nordborg
This can for example be tested by using the reporter importer with a …

Sep 28, 2011:

2:52 PM Ticket #1631 (Raw data importer doesn't log missing features) closed by Nicklas Nordborg
fixed: (In [5768]) Fixes #1631: Raw data importer doesn't log missing features
2:52 PM Changeset [5768] by Nicklas Nordborg
Fixes #1631: Raw data importer doesn't log missing features
2:51 PM Ticket #1631 (Raw data importer doesn't log missing features) created by Nicklas Nordborg
When using the raw data flat file importer with "Feature …
12:49 PM Ticket #1630 (Migrate from MySQL to PostgreSQL) created by Nicklas Nordborg
We are thinking of moving our BASE installation from MySQL to …
9:31 AM Ticket #1626 (Center-align text on buttons) closed by Nicklas Nordborg
fixed: (In [5767]) Fixes #1626: Center-align text on buttons
9:31 AM Changeset [5767] by Nicklas Nordborg
Fixes #1626: Center-align text on buttons
9:00 AM Ticket #1629 (Use <label> instead of javascript for text associated with radio buttons) created by Nicklas Nordborg
In many places with radiobuttons there is a text next to each button …
8:46 AM Ticket #1627 (The "test with file" function has annoying double scrollbars in "File ...) closed by Nicklas Nordborg
fixed: (In [5766]) Fixes #1627: The "test with file" function has annoying …
8:46 AM Changeset [5766] by Nicklas Nordborg
Fixes #1627: The "test with file" function has annoying double …
8:13 AM Ticket #1628 (Use :hover instead of onMouseEnter/onMouseLeave) created by Nicklas Nordborg
We use javascript events in several places (eg. taglibs) to catch when …

Sep 27, 2011:

3:51 PM Ticket #1627 (The "test with file" function has annoying double scrollbars in "File ...) updated by Nicklas Nordborg
Description changed
3:50 PM scrollbars.png attached to Ticket #1627 by Nicklas Nordborg
3:50 PM Ticket #1627 (The "test with file" function has annoying double scrollbars in "File ...) created by Nicklas Nordborg
It's really hard to use because the outer scrollbar is needed to …
3:38 PM Ticket #1613 (Extend the 'roles' test case with some sequence-related tests) updated by Nicklas Nordborg
(In [5765]) References #1613: Extend the 'roles' test case with some …
3:38 PM Changeset [5765] by Nicklas Nordborg
References #1613: Extend the 'roles' test case with some …
2:35 PM Ticket #1624 (Create array design (feature) importer for GTF files) closed by Nicklas Nordborg
fixed: (In [5764]) Fixes #1624: Create array design (feature) importer for …
2:35 PM Changeset [5764] by Nicklas Nordborg
Fixes #1624: Create array design (feature) importer for GTF files * …
12:00 PM buttons.gif attached to Ticket #1626 by Nicklas Nordborg
11:59 AM Ticket #1626 (Center-align text on buttons) created by Nicklas Nordborg
I am not sure when, but somewhere in the BASE 3 development the text …
10:34 AM Ticket #1625 (GAL exporter is only usable for array design that use COORDINATES for ...) created by Nicklas Nordborg
The plug-in should hide itself for other types of array designs.
9:17 AM Ticket #1604 (Support for multiple files of the same type in a FileSet) updated by Nicklas Nordborg
(In [5763]) References #1604: Support for multiple files of the same …
9:17 AM Changeset [5763] by Nicklas Nordborg
References #1604: Support for multiple files of the same type in a …

Sep 26, 2011:

8:06 PM Ticket #1623 (Create reporter importer for GTF files) closed by Nicklas Nordborg
fixed: (In [5759]) Fixes #1623: Create reporter importer for GTF files
3:01 PM Ticket #1604 (Support for multiple files of the same type in a FileSet) updated by Nicklas Nordborg
(In [5762]) References #1604: Support for multiple files of the same …
3:01 PM Changeset [5762] by Nicklas Nordborg
References #1604: Support for multiple files of the same type in a …
2:08 PM Ticket #1623 (Create reporter importer for GTF files) updated by Nicklas Nordborg
(In [5761]) References #1623: Create reporter importer for GTF files …
2:08 PM Changeset [5761] by Nicklas Nordborg
References #1623: Create reporter importer for GTF files Column …
1:45 PM Ticket #1624 (Create array design (feature) importer for GTF files) updated by Nicklas Nordborg
Status, Owner changed
1:20 PM Ticket #1592 (Unified installation procedure for plug-ins, extensions and more...) updated by Nicklas Nordborg
(In [5760]) References #1592: Unified installation procedure for …
1:20 PM Changeset [5760] by Nicklas Nordborg
References #1592: Unified installation procedure for plug-ins, …
12:44 PM Changeset [5759] by Nicklas Nordborg
Fixes #1623: Create reporter importer for GTF files

Sep 23, 2011:

9:23 AM Ticket #1623 (Create reporter importer for GTF files) updated by Nicklas Nordborg
Status, Owner changed
9:05 AM Ticket #978 (Unzipped files never inherit file type specified during upload) closed by Nicklas Nordborg
fixed: (In [5758]) Fixes #978: Unzipped files never inherit file type …
9:05 AM Changeset [5758] by Nicklas Nordborg
Fixes #978: Unzipped files never inherit file type specified during …
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