Timeline



Mar 21, 2009:

11:45 AM Ticket #1263 (Set some values automatically when creating items with the batch importers) closed by Nicklas Nordborg
duplicate: Part i) of this ticket is now replaced by #1264 and #1265. Part ii) …
11:44 AM Ticket #1265 (Hybridization batch importer should set "number of arrays" automatically) created by Nicklas Nordborg
This should happen in a similar way as in the GUI if: * The value …
11:42 AM Ticket #1264 (Raw bioassay batch importer should set array design automatically) created by Nicklas Nordborg
This should happen in a similar way as in the GUI if: * No array …
11:39 AM Ticket #1263 (Set some values automatically when creating items with the batch importers) updated by Nicklas Nordborg
> the total number of arrays in the hybridization can be set during …

Mar 20, 2009:

10:03 PM Ticket #1263 (Set some values automatically when creating items with the batch importers) updated by Jari Häkkinen
Replying to nicklas: > i) This assumes that a scan has …
8:15 PM Ticket #1263 (Set some values automatically when creating items with the batch importers) updated by Nicklas Nordborg
i) This assumes that a scan has been given and it should not be any …
8:08 PM Changeset [4826] by Nicklas Nordborg
Added missing file
4:33 PM Ticket #1263 (Set some values automatically when creating items with the batch importers) created by Jari Häkkinen
In the tickets referenced below some smartness was added to the GUI …
3:41 PM Ticket #1262 (Overview and correction factor plots should use the static cache) updated by Nicklas Nordborg
(In [4825]) References #1262: Overview and correction factor plots …
3:41 PM Changeset [4825] by Nicklas Nordborg
References #1262: Overview and correction factor plots should use the …
3:40 PM Changeset [4824] by Nicklas Nordborg
References #1261: Global cache for static data A prototype …
3:40 PM Ticket #1261 (Global cache for static data) updated by Nicklas Nordborg
(In [4824]) References #1261: Global cache for static data A …
11:19 AM Ticket #1262 (Overview and correction factor plots should use the static cache) created by Nicklas Nordborg
There is no need to re-generate the plots every time a user visits the …
11:17 AM Ticket #1261 (Global cache for static data) updated by Nicklas Nordborg
Status, Owner changed
8:58 AM Ticket #1261 (Global cache for static data) created by Nicklas Nordborg
Implement a global, file-based, cache that can be used to store …
8:02 AM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) updated by Nicklas Nordborg
Priority, Summary changed

Mar 19, 2009:

4:53 PM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) updated by Jari Häkkinen
Replying to nicklas: > I think it is only an icorrect …
4:08 PM Changeset [4823] by Martin Svensson
References #1240. The node-icons are getting updated when expanding …
4:08 PM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by Martin Svensson
(In [4823]) References #1240. The node-icons are getting updated when …
3:40 PM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) updated by Nicklas Nordborg
I think it is only an icorrect title... On my installation it is the …
3:28 PM Ticket #1260 (Incorrect title on import dialog when opened from array slide and ...) created by Jari Häkkinen
Clicking of the import button starts the hybridization importer?? …
2:06 PM Changeset [4822] by Nicklas Nordborg
Fixes #1255: Make annotation importer handle units
2:06 PM Ticket #1255 (Make annotation importer handle units) closed by Nicklas Nordborg
fixed: (In [4822]) Fixes #1255: Make annotation importer handle units
9:53 AM Ticket #1255 (Make annotation importer handle units) updated by Nicklas Nordborg
Status, Milestone, Owner changed
9:13 AM Ticket #1216 (Annotation importer selects "wrong" configuration) closed by Nicklas Nordborg
worksforme: Closing this ticket since no feedback has been provided.
9:12 AM Ticket #1079 (Raw data import takes very long time to fail when user exceeds quota) closed by Nicklas Nordborg
invalid: Closing this ticket since no feedback has been provided.
9:12 AM Ticket #1195 (Problem when importing negative values for annotations with float as ...) closed by Nicklas Nordborg
invalid: Closing this ticket since no feedback has been provided.
9:05 AM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) closed by Nicklas Nordborg
wontfix: Since it is a bad idea to repeat the query I think the core should not …
9:02 AM Ticket #1258 (New export format for bioassay set spot data) updated by Nicklas Nordborg
Summary changed

Mar 18, 2009:

3:42 PM Changeset [4821] by Nicklas Nordborg
References #1238: Check performance of BioAssaySetExporter Need …
3:42 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
(In [4821]) References #1238: Check performance of BioAssaySetExporter
2:18 PM Changeset [4820] by Nicklas Nordborg
References #1238: Check performance of BioAssaySetExporter Fixes a …
2:18 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
(In [4820]) References #1238: Check performance of BioAssaySetExporter
2:10 PM Changeset [4819] by Nicklas Nordborg
References #1248: Long running job may cause a timeout on session on …
2:10 PM Ticket #1248 (Long running job may cause a timeout on session on internal job queue) updated by Nicklas Nordborg
(In [4819]) References #1248: Long running job may cause a timeout on …
12:39 PM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
So, a decision needs to be made. Should we have an index on the …

Mar 17, 2009:

3:41 PM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
Results from 'grey' # = Number of assays R = No index I = With index …
11:44 AM Ticket #1244 (Incorrect documentation in MenuItemAction) closed by Nicklas Nordborg
fixed: (In [4818]) Fixes #1244: Incorrect documentation in MenuItemAction
11:44 AM Changeset [4818] by Nicklas Nordborg
Fixes #1244: Incorrect documentation in MenuItemAction
10:53 AM Ticket #1251 (Improvements of the 'performance' test program) closed by Nicklas Nordborg
fixed
10:53 AM Ticket #1238 (Check performance of BioAssaySetExporter) closed by Nicklas Nordborg
fixed
9:07 AM Changeset [4817] by Nicklas Nordborg
References #903: Experiment Explorer is slow Testing the idea of …
9:07 AM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
(In [4817]) References #903: Experiment Explorer is slow Testing the …

Mar 16, 2009:

3:15 PM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by Martin Svensson
(In [4816]) References #1240 The item-overview tree is now using lazy …
3:15 PM Changeset [4816] by Martin Svensson
References #1240 The item-overview tree is now using lazy loading. The …
2:57 PM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
I have no measured times on this by it feels a bit better. I would say …
2:41 PM Changeset [4815] by Nicklas Nordborg
References #903: Experiment Explorer is slow Testing the idea of …
2:41 PM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
(In [4815]) References #903: Experiment Explorer is slow Testing the …
2:01 PM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
Regarding the first reporter/position caching query, I think there are …
1:40 PM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
I'll continue by checking the two remaining queries. The first query …
11:28 AM Ticket #1257 (Use multiple threads in Lowess) updated by Nicklas Nordborg
The debugging on 'grey' showed that the initial statement that the …
11:11 AM Ticket #1258 (New export format for bioassay set spot data) updated by Jari Häkkinen
Replying to jari: > I suppose the BASEfile can do the …
9:39 AM Ticket #1257 (Use multiple threads in Lowess) closed by Nicklas Nordborg
fixed: (In [4814]) Fixes #1257: Use multiple threads in Lowess Removed debug …
9:39 AM Changeset [4814] by Nicklas Nordborg
Fixes #1257: Use multiple threads in Lowess Removed debug output.
9:29 AM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) updated by Nicklas Nordborg
The user can't know that.
9:27 AM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) updated by Jari Häkkinen
Replying to nicklas: > No it not possible for the exporter …
9:24 AM Ticket #1257 (Use multiple threads in Lowess) updated by Nicklas Nordborg
(In [4813]) References #1257: Use multiple threads in Lowess Now uses …
9:24 AM Changeset [4813] by Nicklas Nordborg
References #1257: Use multiple threads in Lowess Now uses …
9:09 AM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) closed by Nicklas Nordborg
wontfix: No it not possible for the exporter to have this information. It …
8:59 AM Ticket #1258 (New export format for bioassay set spot data) updated by Jari Häkkinen
Component changed
I suppose the BASEfile can do the trick, however there is the header …
8:57 AM Ticket #1259 (Exporting spot data (with table exporter): Bioassay column is ...) created by Jari Häkkinen
How do I as a user know which bioassay 1, 2, 3 and so on corresponds …

Mar 13, 2009:

5:40 PM Ticket #1258 (New export format for bioassay set spot data) updated by Nicklas Nordborg
Do you mean the export that is done by the Table exporter plug-in? If …
3:55 PM Ticket #1258 (New export format for bioassay set spot data) created by Jari Häkkinen
It would be nice to be able to export bioassay set spot data without …
3:05 PM Changeset [4812] by Nicklas Nordborg
References #1257: Use multiple threads in Lowess Trying a different …
3:05 PM Ticket #1257 (Use multiple threads in Lowess) updated by Nicklas Nordborg
(In [4812]) References #1257: Use multiple threads in Lowess Trying a …
3:04 PM Ticket #1257 (Use multiple threads in Lowess) updated by Nicklas Nordborg
Timings for Lowess on 'grey' when using two worker threads: […] …
2:00 PM Changeset [4811] by Nicklas Nordborg
References #1257: Use multiple threads in Lowess Checking in a …
2:00 PM Ticket #1257 (Use multiple threads in Lowess) updated by Nicklas Nordborg
(In [4811]) References #1257: Use multiple threads in Lowess Checking …
1:57 PM Ticket #1257 (Use multiple threads in Lowess) updated by Nicklas Nordborg
Here are the original timings for the Lowess plug-in on 'grey'. For …
1:55 PM reference-times-grey.txt attached to Ticket #1238 by Nicklas Nordborg
Reference measurements of other plug-ins on 'grey'
12:47 PM Ticket #1257 (Use multiple threads in Lowess) updated by Nicklas Nordborg
Owner, Status changed
12:44 PM Changeset [4810] by Nicklas Nordborg
References #1238: Check performance of BioAssaySetExporter Cleaning …
12:44 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
(In [4810]) References #1238: Check performance of BioAssaySetExporter
12:09 PM export-times-grey-4807.txt attached to Ticket #1238 by Nicklas Nordborg
Export times on 'grey' after the fix in [4807]
11:37 AM Changeset [4809] by Nicklas Nordborg
References #903: Experiment Explorer is slow Sort positions in …
11:37 AM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
(In [4809]) References #903: Experiment Explorer is slow Sort …
11:09 AM Changeset [4808] by Nicklas Nordborg
References #903: Experiment Explorer is slow Increased the cache to …
11:09 AM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
(In [4808]) References #903: Experiment Explorer is slow Increased …
8:21 AM Ticket #1257 (Use multiple threads in Lowess) created by Nicklas Nordborg
The Lowess plug-in is spending most if it's time doing calculations, …

Mar 12, 2009:

2:16 PM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
Status, Owner changed
11:34 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
The first test results from 'grey' have finally arrived. The results …
11:16 AM export-times-grey-ref.txt attached to Ticket #1238 by Nicklas Nordborg
Reference measurements of BioAssaySetExporter on grey
11:15 AM export-times-auster-4807.txt attached to Ticket #1238 by Nicklas Nordborg
Export times after the fix in [4807]
11:13 AM Changeset [4807] by Nicklas Nordborg
References #1238: Check performance of BioAssaySetExporter This "fix" …
11:13 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
(In [4807]) References #1238: Check performance of BioAssaySetExporter
8:22 AM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by Martin Svensson
Status, Owner changed

Mar 11, 2009:

2:15 PM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) updated by Nicklas Nordborg
> Would we schedule the re-factoring to the next (2.11) milestone or …
1:54 PM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) updated by Jari Häkkinen
Replying to nicklas: > My recommendation is to avoid …
1:40 PM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
I have identified five different queries that are used in the …
1:12 PM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) updated by Nicklas Nordborg
My recommendation is to avoid queries that are not absolutely …
12:24 PM Ticket #1256 (Query used in exportPlainMatrix method in BioAssaySetExporter must be ...) created by Jari Häkkinen
... I think. My problem is that I export a plain matrix, make …
8:43 AM Specifications/Test_procedures edited by Nicklas Nordborg
Linking to new performance test document (diff)
8:40 AM Specifications/Test_procedures/Roles edited by Nicklas Nordborg
(diff)
8:09 AM Ticket #1255 (Make annotation importer handle units) updated by Nicklas Nordborg
Type changed

Mar 10, 2009:

6:06 PM Ticket #1255 (Make annotation importer handle units) created by Jari Häkkinen
The annotation importer should be able to handle units, refs …
6:02 PM Ticket #1254 (How about change of file type for list of files?) created by Jari Häkkinen
Add support to change file type for files selected in the file viewer, …
5:56 PM Ticket #978 (Unzipped files never inherit file type specified during upload) reopened by Jari Häkkinen
Reopening this ticket and adding to the BASE 3.0 milestone for …
5:36 PM Ticket #1222 (Document the nice batch import of raw data through experiment import button) updated by Jari Häkkinen
Description changed
5:34 PM Ticket #1253 (plainMatrixExport documentation needs to be clarified) created by Jari Häkkinen
The documentation says that reporters and assays are ordered in …
3:02 PM Ticket #1251 (Improvements of the 'performance' test program) updated by Nicklas Nordborg
(In [4806]) References #1251: Improvements of the 'performance' test …
3:02 PM Changeset [4806] by Nicklas Nordborg
References #1251: Improvements of the 'performance' test program 1-4 …
2:49 PM Ticket #1252 (Core export plug-ins section; bioassay set exports) created by Jari Häkkinen
We should add information on what file formats can be exported ... …
9:30 AM Ticket #1251 (Improvements of the 'performance' test program) updated by Nicklas Nordborg
Description changed
9:26 AM Ticket #1251 (Improvements of the 'performance' test program) updated by Nicklas Nordborg
Description changed
9:19 AM Ticket #1251 (Improvements of the 'performance' test program) updated by Nicklas Nordborg
Description changed
9:18 AM Ticket #1251 (Improvements of the 'performance' test program) updated by Nicklas Nordborg
(In [4805]) References #1251: Improvements of the 'performance' test …
9:18 AM Changeset [4805] by Nicklas Nordborg
References #1251: Improvements of the 'performance' test program …
9:09 AM Ticket #1251 (Improvements of the 'performance' test program) updated by Nicklas Nordborg
Status, Owner changed
9:09 AM Ticket #1251 (Improvements of the 'performance' test program) created by Nicklas Nordborg
I will gather a few enhancements to the 'performance' test program …
9:05 AM Changeset [4804] by Nicklas Nordborg
Fixes #1250: The internal job queue start jobs that has been marked as …
9:05 AM Ticket #1250 (The internal job queue start jobs that has been marked as "removed") closed by Nicklas Nordborg
fixed: (In [4804]) Fixes #1250: The internal job queue start jobs that has …
8:49 AM Ticket #1250 (The internal job queue start jobs that has been marked as "removed") updated by Nicklas Nordborg
Owner, Status changed

Mar 9, 2009:

1:49 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
> Try to re-write the export to get reporter information in a separate …
1:41 PM Features edited by Jari Häkkinen
(diff)
11:28 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
> Try to re-write the serial export to only use a single query. This …
9:21 AM export-times-auster-ref.txt attached to Ticket #1238 by Nicklas Nordborg
Reference measurements of BioAssaySetExporter on auster
9:01 AM Ticket #1232 (Long running getAllInheritedAnnotations query) updated by Martin Svensson
Owner, Status changed

Mar 6, 2009:

3:37 PM Changeset [4803] by Nicklas Nordborg
References #1238: Check performance of BioAssaySetExporter Added test …
3:37 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
(In [4803]) References #1238: Check performance of BioAssaySetExporter
2:54 PM Ticket #1250 (The internal job queue start jobs that has been marked as "removed") created by Nicklas Nordborg
1. Do anything that ends up in registration of a job, for example, an …
1:34 PM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
I have now added the initial measurements which are made with a BASE …
10:44 AM Ticket #1249 (Error message explanation subsection in FAQ part of the manual) created by Jari Häkkinen
We should probably add a section explaining some error messages in the …
9:42 AM reference-times.txt attached to Ticket #1238 by Nicklas Nordborg
Reference measurements of other plug-ins
9:16 AM Changeset [4802] by Nicklas Nordborg
Fixes #1247: BioAssaySetExporter doesn't update progress when …
9:16 AM Ticket #1247 (BioAssaySetExporter doesn't update progress when exporting to BASEFile ...) closed by Nicklas Nordborg
fixed: (In [4802]) Fixes #1247: BioAssaySetExporter doesn't update progress …

Mar 5, 2009:

1:26 PM Changeset [4801] by Nicklas Nordborg
Fixes #1248: Long running job may cause a timeout on session on …
1:26 PM Ticket #1248 (Long running job may cause a timeout on session on internal job queue) closed by Nicklas Nordborg
fixed: (In [4801]) Fixes #1248: Long running job may cause a timeout on …
12:44 PM Ticket #1246 (Annotation importer refuses to skip bad lines) closed by Martin Svensson
fixed: (In [4800]) Fixes #1246 Annotation importer refuses to skip bad lines. …
12:44 PM Changeset [4800] by Martin Svensson
Fixes #1246 Annotation importer refuses to skip bad lines. …
12:34 PM Changeset [4799] by Martin Svensson
Removed unused import
8:55 AM Ticket #1247 (BioAssaySetExporter doesn't update progress when exporting to BASEFile ...) updated by Nicklas Nordborg
Owner, Status changed
8:54 AM Ticket #1248 (Long running job may cause a timeout on session on internal job queue) updated by Nicklas Nordborg
Owner, Status changed
8:54 AM Ticket #1248 (Long running job may cause a timeout on session on internal job queue) created by Nicklas Nordborg
It seems like if a job doesn't do anything for some time that triggers …

Mar 4, 2009:

1:07 PM Ticket #1247 (BioAssaySetExporter doesn't update progress when exporting to BASEFile ...) created by Nicklas Nordborg
The progress stands at 0% until the export has finished. If exporting …

Mar 3, 2009:

1:29 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by Martin Svensson
Status changed
1:29 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by Martin Svensson
Status, Owner changed
Tested Mylyn plugin for Eclipse but everything wasn't included in the …
1:25 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by Martin Svensson
Type, Description changed
1:24 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by Martin Svensson
Status, Description, Type changed
9:37 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
Status, Owner changed
9:25 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
Description changed
Initial tests seems to indicate that the main factor is the number of …
8:45 AM Ticket #1241 (Implement "lazy loading" of the directory tree) closed by Nicklas Nordborg
fixed: (In [4798]) Fixes #1241: Implement "lazy loading" of the directory …
8:45 AM Ticket #1242 (Generate <img> tag for spot images with a class attribute) reopened by Nicklas Nordborg
Oopss.. the previous commit should have gone to #1241.
8:43 AM Changeset [4798] by Nicklas Nordborg
Fixes #1242: Implement "lazy loading" of the directory tree Forgot …
8:43 AM Ticket #1242 (Generate <img> tag for spot images with a class attribute) closed by Nicklas Nordborg
fixed: (In [4798]) Fixes #1242: Implement "lazy loading" of the directory …
8:42 AM Changeset [4797] by Nicklas Nordborg
Fixes #1245: Add support for lazy loading of nodes in JoustTree Made …
8:42 AM Ticket #1245 (Add support for lazy loading of nodes in JoustTree) closed by Nicklas Nordborg
fixed: (In [4797]) Fixes #1245: Add support for lazy loading of nodes in …

Mar 2, 2009:

7:58 PM Changeset [4796] by Nicklas Nordborg
References #1241: Implement "lazy loading" of the directory tree We …
7:58 PM Ticket #1241 (Implement "lazy loading" of the directory tree) updated by Nicklas Nordborg
(In [4796]) References #1241: Implement "lazy loading" of the …
7:56 PM Ticket #1246 (Annotation importer refuses to skip bad lines) updated by Nicklas Nordborg
The error handling code is there, but it seems that it has not been …
2:38 PM Labeledextract.txt attached to Ticket #1246 by Jari Häkkinen
Sample file to import annotation to lableled extracts
2:33 PM Ticket #1246 (Annotation importer refuses to skip bad lines) created by Jari Häkkinen
I have a file (attached) that refuses to import. All lines with valid …
11:34 AM Changeset [4795] by Nicklas Nordborg
References #1245: Add support for lazy loading of nodes in JoustTree
11:34 AM Tickets #1245,​1241 batch updated by Nicklas Nordborg
(In [4795]) References #1245: Add support for lazy loading of nodes in …
11:33 AM Ticket #1241 (Implement "lazy loading" of the directory tree) updated by Nicklas Nordborg
Owner, Status changed
11:32 AM Changeset [4794] by Nicklas Nordborg
References #1241: Implement "lazy loading" of the directory tree I …
11:32 AM Ticket #1241 (Implement "lazy loading" of the directory tree) updated by Nicklas Nordborg
(In [4794]) References #1241: Implement "lazy loading" of the …

Feb 27, 2009:

2:52 PM Changeset [4793] by Nicklas Nordborg
References #1245: Add support for lazy loading of nodes in JoustTree
2:52 PM Ticket #1245 (Add support for lazy loading of nodes in JoustTree) updated by Nicklas Nordborg
(In [4793]) References #1245: Add support for lazy loading of nodes in …
12:32 PM DownloadPage edited by Martin Svensson
Changed an Invalid link (diff)
11:50 AM Ticket #1245 (Add support for lazy loading of nodes in JoustTree) updated by Nicklas Nordborg
Status, Owner changed
11:50 AM Ticket #1241 (Implement "lazy loading" of the directory tree) updated by Nicklas Nordborg
Description changed
11:50 AM Ticket #1240 (Implement "lazy loading" in the generic "item overview") updated by Nicklas Nordborg
Description changed
11:49 AM Ticket #1245 (Add support for lazy loading of nodes in JoustTree) created by Nicklas Nordborg
The JoustTree component is used to generate various overviews that are …
8:54 AM Ticket #1244 (Incorrect documentation in MenuItemAction) created by Nicklas Nordborg
The class documentation for …

Feb 26, 2009:

2:43 PM Ticket #1237 (BioAssaySetExporter should attach generated files to the bioassayset) closed by Nicklas Nordborg
fixed
9:28 AM Ticket #1237 (BioAssaySetExporter should attach generated files to the bioassayset) updated by Nicklas Nordborg
(In [4792]) References #1237: BioAssaySetExporter should attach …
9:28 AM Changeset [4792] by Nicklas Nordborg
References #1237: BioAssaySetExporter should attach generated files to …

Feb 25, 2009:

10:55 AM Ticket #1237 (BioAssaySetExporter should attach generated files to the bioassayset) updated by Nicklas Nordborg
(In [4791]) References #1237: BioAssaySetExporter should attach …
10:55 AM Changeset [4791] by Nicklas Nordborg
References #1237: BioAssaySetExporter should attach generated files to …
9:58 AM Changeset [4790] by Nicklas Nordborg
Fixes #1243: Fix TestBioAssaySetExporter and include it in TestAll
9:58 AM Ticket #1243 (Fix TestBioAssaySetExporter and include it in TestAll) closed by Nicklas Nordborg
fixed: (In [4790]) Fixes #1243: Fix TestBioAssaySetExporter and include it in …
9:12 AM Ticket #1243 (Fix TestBioAssaySetExporter and include it in TestAll) updated by Nicklas Nordborg
Owner, Status changed
9:12 AM Ticket #1243 (Fix TestBioAssaySetExporter and include it in TestAll) created by Nicklas Nordborg
I just found out that the TestBioAssaySetExporter is not included in …

Feb 24, 2009:

12:57 PM Ticket #1242 (Generate <img> tag for spot images with a class attribute) created by Jari Häkkinen
Greetings! I'm using base-2.9.2 on tomcat 6.0.18 in Geronimo 2.1.3. …
12:50 PM Ticket #1239 (Units for concentrations) closed by Jari Häkkinen
invalid: Of course. Somehow I missed density!
12:45 PM Ticket #1237 (BioAssaySetExporter should attach generated files to the bioassayset) updated by Nicklas Nordborg
Description changed
12:29 PM Ticket #1237 (BioAssaySetExporter should attach generated files to the bioassayset) updated by Nicklas Nordborg
Owner, Status changed
11:45 AM Ticket #1239 (Units for concentrations) updated by Nicklas Nordborg
Some of those already exists: * weight/volume = Density * parts = …
11:33 AM Ticket #1241 (Implement "lazy loading" of the directory tree) created by Nicklas Nordborg
On a server with lots of user's the file manager is almost impossible …
11:30 AM Ticket #1240 (Implement "lazy loading" in the generic "item overview") created by Nicklas Nordborg
This means that a sub-tree should not be loaded until a user opens the …
11:22 AM Ticket #1239 (Units for concentrations) created by Jari Häkkinen
I think we should add a quantity/unit type for concentrations. I …
11:20 AM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
Type changed
11:20 AM Ticket #1232 (Long running getAllInheritedAnnotations query) updated by Nicklas Nordborg
Type changed
11:20 AM Ticket #1232 (Long running getAllInheritedAnnotations query) updated by Nicklas Nordborg
Milestone changed
11:19 AM Ticket #903 (Experiment Explorer is slow) updated by Nicklas Nordborg
Milestone changed
11:19 AM Ticket #1238 (Check performance of BioAssaySetExporter) updated by Nicklas Nordborg
Description changed
11:19 AM Ticket #1238 (Check performance of BioAssaySetExporter) created by Nicklas Nordborg
This is slightly related to #1237 and may be caused by the same thing …
11:17 AM Ticket #1237 (BioAssaySetExporter should attach generated files to the bioassayset) created by Nicklas Nordborg
The main reason is that we want to change the MeV launcher so that it …
11:09 AM Milestone BASE 2.10 completed
The focus in this release will be to enhance the biomaterial section …
11:07 AM Changeset [4789] by Nicklas Nordborg
Merged pre-2.10-releases to the trunk.
10:01 AM DownloadPage edited by Nicklas Nordborg
Releasing BASE 2.10 (diff)
9:56 AM Changeset [4788] by Nicklas Nordborg
Changes for future release 2.10.1
9:42 AM Changeset [4787] by Nicklas Nordborg
Tagging version 2.10
9:41 AM Ticket #1193 (Generic tree-like item overview) updated by Nicklas Nordborg
(In [4786]) References #1193: Generic tree-like item overview Fixed …
9:40 AM Changeset [4786] by Nicklas Nordborg
References #1193: Generic tree-like item overview Fixed javadoc that …
9:36 AM Changeset [4785] by Nicklas Nordborg
Preparing release 2.10
8:23 AM Ticket #1190 (API and interface for creating biomaterial lists) closed by Nicklas Nordborg
fixed
8:22 AM Ticket #1175 (Biomaterial lists) closed by Nicklas Nordborg
fixed

Feb 23, 2009:

4:17 PM Ticket #522 (Write "Why use BASE" section) updated by Jari Häkkinen
Milestone changed
Now, the section did not make this release either.
4:16 PM Ticket #1234 (Read the bioplate section in biomaterial) closed by Jari Häkkinen
fixed: (In [4784]) Fixes #1234.
4:16 PM Changeset [4784] by Jari Häkkinen
Fixes #1234.
2:54 PM Changeset [4783] by Nicklas Nordborg
Updated 'roles' test instructions to make them compatible with the …
1:56 PM Changeset [4782] by Nicklas Nordborg
Remove debug alert message.
1:41 PM Ticket #979 (Biomaterial LIMS) updated by Nicklas Nordborg
(In [4781]) References #979: Biomaterial LIMS Made 'ok' and 'cancel' …
1:41 PM Changeset [4781] by Nicklas Nordborg
References #979: Biomaterial LIMS Made 'ok' and 'cancel' buttons …
1:40 PM Changeset [4780] by Nicklas Nordborg
Updated the 'roles' test program and instructions.

Feb 20, 2009:

10:01 AM Ticket #1193 (Generic tree-like item overview) updated by Nicklas Nordborg
(In [4779]) References #1193: Generic tree-like item overview Fixed a …
10:01 AM Changeset [4779] by Nicklas Nordborg
References #1193: Generic tree-like item overview Fixed a problem …
9:33 AM MinorReleaseTest edited by Nicklas Nordborg
(diff)
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