Timeline



May 16, 2008:

12:08 PM Ticket #1016 (Filter table using a reporter list) updated by Nicklas Nordborg
Status, Owner changed
11:40 AM Changeset [4301] by Nicklas Nordborg
References #1019: Reporter list manager - Create reporter list using …
11:40 AM Ticket #1019 (Reporter list manager - Create reporter list using combinations of ...) updated by Nicklas Nordborg
(In [4301]) References #1019: Reporter list manager - Create reporter …
11:17 AM Changeset [4300] by Martin Svensson
Removed debug-code

May 15, 2008:

2:15 PM Ticket #987 (NullPointerException in "Test with file" function if no "data header ...) updated by Martin Svensson
Status, Owner changed
12:00 PM Ticket #966 (Registered and possibly last updated – add to all/most items) updated by Jari Häkkinen
Priority changed
11:59 AM Ticket #1012 (Information on 'read' access to users needs clarification) updated by Jari Häkkinen
Priority changed
11:59 AM Ticket #925 (A candidate FAQ to Chapter 28. Reporters related FAQs) updated by Jari Häkkinen
Priority changed
11:58 AM Ticket #979 (Biomaterial LIMS) updated by Jari Häkkinen
Priority changed
11:58 AM Ticket #1029 (Write specification for support of files in analysis tree (ie not ...) updated by Jari Häkkinen
Priority changed
11:57 AM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
Priority changed
11:55 AM Ticket #639 (exportPureMatrix method) updated by Jari Häkkinen
Milestone, Version, Owner, Status changed
11:47 AM Ticket #1010 (Display progress reporter for plug-ins that are executing with the ...) updated by Jari Häkkinen
Milestone changed
11:45 AM Ticket #979 (Biomaterial LIMS) updated by Jari Häkkinen
Owner, Milestone changed
11:43 AM Ticket #1027 (Annotation importer should be able to remove annotations) updated by Jari Häkkinen
Milestone changed
11:40 AM Ticket #1023 (Add support for using regular expressions when filtering lists) updated by Jari Häkkinen
Milestone changed
11:39 AM Ticket #1022 (Add support for using regular expressions in queries) updated by Jari Häkkinen
Milestone changed
11:37 AM Ticket #1016 (Filter table using a reporter list) updated by Jari Häkkinen
Milestone changed
11:36 AM Ticket #1015 (Add reporter list from tables that list reporters/reporter info.) updated by Jari Häkkinen
Milestone changed
11:36 AM Ticket #1014 (Issues listing data after removing items) updated by Jari Häkkinen
Milestone changed
11:35 AM Ticket #1012 (Information on 'read' access to users needs clarification) updated by Jari Häkkinen
Milestone, Owner changed
11:34 AM Ticket #987 (NullPointerException in "Test with file" function if no "data header ...) updated by Jari Häkkinen
Milestone changed
11:33 AM Ticket #982 (Wrong destination (for shared to user) from link to directory from ...) updated by Jari Häkkinen
Milestone, Owner changed
Johan check this issue.
11:31 AM Ticket #978 (Unzipped files never inherit file type specified during upload) closed by Jari Häkkinen
wontfix
11:30 AM Ticket #975 (Experimental overview – error/erroneous warning – Duplicate sub-array index) closed by Jari Häkkinen
worksforme
11:30 AM Ticket #975 (Experimental overview – error/erroneous warning – Duplicate sub-array index) reopened by Jari Häkkinen
11:30 AM Ticket #975 (Experimental overview – error/erroneous warning – Duplicate sub-array index) closed by Jari Häkkinen
wontfix: We'll close this ticket for now since we cannot reproduce the problem.
11:26 AM Ticket #966 (Registered and possibly last updated – add to all/most items) updated by Jari Häkkinen
Owner, Milestone changed
This ticket should be split to a registered ticket and last updated …
11:21 AM Ticket #925 (A candidate FAQ to Chapter 28. Reporters related FAQs) updated by Jari Häkkinen
Milestone, Version changed
11:19 AM Ticket #903 (Experiment Explorer is slow) updated by Jari Häkkinen
Milestone changed
11:16 AM Ticket #897 (Potential temporary directory clash for plugins running through job agents) closed by Jari Häkkinen
wontfix: This issue is something that the administrator and plugin programmer …
11:00 AM Ticket #1029 (Write specification for support of files in analysis tree (ie not ...) created by Jari Häkkinen
Read the attached file for details. Things to do: - Generate sample …
10:52 AM Ticket #1028 (Plug-in for batch upload/modification of items) updated by Jari Häkkinen
Status changed
10:52 AM Ticket #1028 (Plug-in for batch upload/modification of items) created by Jari Häkkinen
References to the latest versions of files (please keep this list up …
10:35 AM Ticket #621 (Write 'Plate' section) updated by Jari Häkkinen
Milestone changed

May 14, 2008:

10:41 AM Ticket #1019 (Reporter list manager - Create reporter list using combinations of ...) updated by Nicklas Nordborg
Milestone, Status, Owner changed
10:40 AM Ticket #1020 (A reporter list should hold the number of reporters in it) closed by Nicklas Nordborg
fixed: (In [4299]) Fixes #1020: A reporter list should hold the number of …
10:40 AM Changeset [4299] by Nicklas Nordborg
Fixes #1020: A reporter list should hold the number of reporters in it
8:57 AM Ticket #1020 (A reporter list should hold the number of reporters in it) updated by Nicklas Nordborg
Owner, Milestone, Status changed

May 13, 2008:

2:40 PM Ticket #408 (Implement FTP server) updated by Nicklas Nordborg
It seems like the Apache FTP server has been bumped up a level. The …
11:44 AM ReleaseProcedure edited by Nicklas Nordborg
Fixed example links for revision logs (diff)
11:29 AM Milestone BASE 2.7 completed
Major features in this milestone: * Extension system for the web …
11:26 AM Changeset [4298] by Nicklas Nordborg
Merged pre-2.7-release to the trunk.
11:04 AM ReleaseProcedure edited by Nicklas Nordborg
New (temporary) procedure for generating documentation (diff)
10:49 AM DownloadPage edited by Nicklas Nordborg
Releasing 2.7.0 (diff)
9:54 AM ReleaseProcedure edited by Nicklas Nordborg
Fixed item numbering (diff)
9:49 AM Changeset [4297] by Nicklas Nordborg
Changes for future release 2.7.1
9:44 AM Changeset [4296] by Nicklas Nordborg
Tagging version 2.7
9:44 AM Changeset [4295] by Nicklas Nordborg
Preparing relese 2.7

May 12, 2008:

8:20 PM Changeset [4294] by Nicklas Nordborg
References #932: Convert the MeV launcher to an extension Removed MeV …
8:20 PM Ticket #932 (Convert the MeV launcher to an extension) updated by Nicklas Nordborg
(In [4294]) References #932: Convert the MeV launcher to an extension …
2:03 PM ReleaseProcedure edited by Nicklas Nordborg
Added instruction to upload BASE2*.jar files (diff)
12:54 PM Ticket #932 (Convert the MeV launcher to an extension) updated by Nicklas Nordborg
(In [4293]) References #932: Convert the MeV launcher to an extension …
12:54 PM Changeset [4293] by Nicklas Nordborg
References #932: Convert the MeV launcher to an extension Updated …
11:46 AM Changeset [4292] by Nicklas Nordborg
Fixes #997: Read and update installation/upgrade instructions
11:46 AM Ticket #997 (Read and update installation/upgrade instructions) closed by Nicklas Nordborg
fixed: (In [4292]) Fixes #997: Read and update installation/upgrade instructions
10:53 AM Ticket #997 (Read and update installation/upgrade instructions) updated by Nicklas Nordborg
Status, Owner changed
9:49 AM Ticket #1027 (Annotation importer should be able to remove annotations) created by Nicklas Nordborg
If the new value for an annotation is empty(=null) there should be an …
9:31 AM Changeset [4291] by Nicklas Nordborg
Some minor changes to test procedures

May 9, 2008:

2:24 PM Ticket #1011 (Select multiple alternatives for a filter with a specified list of options) updated by Nicklas Nordborg
(In [4290]) References #1011: Select multiple alternatives for a …
2:24 PM Changeset [4290] by Nicklas Nordborg
References #1011: Select multiple alternatives for a filter with a …
12:49 PM Changeset [4289] by Nicklas Nordborg
References #933: Create extension points for some selected places in …
12:49 PM Ticket #933 (Create extension points for some selected places in the web client) updated by Nicklas Nordborg
(In [4289]) References #933: Create extension points for some selected …
12:18 PM Changeset [4288] by Nicklas Nordborg
Fixes #1026: Test programs that need the extended test data should …
12:18 PM Ticket #1026 (Test programs that need the extended test data should check that it ...) closed by Nicklas Nordborg
fixed: (In [4288]) Fixes #1026: Test programs that need the extended test …
11:17 AM Ticket #1026 (Test programs that need the extended test data should check that it ...) created by Nicklas Nordborg
The test data we are referring to is described here …
9:35 AM Changeset [4287] by Nicklas Nordborg
Deleting obsolete branches
8:47 AM Changeset [4286] by Nicklas Nordborg
Changes for future release 2.8
8:46 AM Changeset [4285] by Nicklas Nordborg
Forking new minor version 2.7 branch
8:44 AM Changeset [4284] by Nicklas Nordborg
Merged patch release 2.6.3 to the trunk. Delta: tags/2.6.3 - tags/2.6.2
8:33 AM DownloadPage edited by Nicklas Nordborg
Releasing 2.6.3 (diff)
8:13 AM Milestone BASE 2.6.3 completed
Bug fixes for 2.6.2: Revision log: log:branches/2.6-stable@4230:4283
8:10 AM Changeset [4283] by Nicklas Nordborg
Tagging version 2.6.3
8:08 AM Changeset [4282] by Nicklas Nordborg
Preparing release 2.6.3

May 8, 2008:

10:33 PM Changeset [4281] by Jari Häkkinen
Removed potentially dangerous static declaration.
4:37 PM Ticket #1017 (Make MedianRatioNormalization to normalize 1-channel data) closed by Jari Häkkinen
fixed: (In [4280]) Fixes #1017. 1-channel median normalizarion added.
4:37 PM Changeset [4280] by Jari Häkkinen
Fixes #1017. 1-channel median normalizarion added.
3:09 PM Ticket #1019 (Reporter list manager - Create reporter list using combinations of ...) updated by Johan Vallon-Christersson
Replying to nicklas: > I find the description in this …
1:46 PM Changeset [4279] by Nicklas Nordborg
Updating credits.txt before 2.7.0 release.
1:00 PM Ticket #773 (Filter reporter table using array design) closed by Nicklas Nordborg
wontfix: This should be possible when #1015 and #1016 becomes fixed. Eg. first …
12:57 PM Ticket #1007 (Add reference to the Illumina plugin in BASE doc Appendix B) closed by Nicklas Nordborg
wontfix: I think the existing link is enough.
12:52 PM Ticket #933 (Create extension points for some selected places in the web client) closed by Nicklas Nordborg
fixed: Nothing more to do.
12:51 PM Ticket #1011 (Select multiple alternatives for a filter with a specified list of options) closed by Nicklas Nordborg
fixed: (In [4278]) Fixes #1011: Select multiple alternatives for a filter …
12:51 PM Changeset [4278] by Nicklas Nordborg
Fixes #1011: Select multiple alternatives for a filter with a …
12:51 PM Changeset [4277] by Nicklas Nordborg
Fixes #1025: Add Hql.size() expression
12:51 PM Ticket #1025 (Add Hql.size() expression) closed by Nicklas Nordborg
fixed: (In [4277]) Fixes #1025: Add Hql.size() expression
12:50 PM Ticket #1025 (Add Hql.size() expression) created by Nicklas Nordborg
This is a HQL expression that creates a size(collection) expression. …
12:47 PM Ticket #1011 (Select multiple alternatives for a filter with a specified list of options) updated by Nicklas Nordborg
Summary changed
11:49 AM Changeset [4276] by Nicklas Nordborg
References #988: Add support for servlets in extensions Fixed …
11:49 AM Ticket #988 (Add support for servlets in extensions) updated by Nicklas Nordborg
(In [4276]) References #988: Add support for servlets in extensions …
10:48 AM Changeset [4275] by Nicklas Nordborg
References #1011: Allow to select multiple alternatives for a filter …
10:48 AM Ticket #1011 (Select multiple alternatives for a filter with a specified list of options) updated by Nicklas Nordborg
(In [4275]) References #1011: Allow to select multiple alternatives …
9:42 AM Ticket #1011 (Select multiple alternatives for a filter with a specified list of options) updated by Nicklas Nordborg
Status changed
9:39 AM Changeset [4274] by Martin Svensson
References #1021 Correct value is now returned by the pathCanBeUsed-method
9:39 AM Ticket #1021 (Unclosed DbControler) updated by Martin Svensson
(In [4274]) References #1021 Correct value is now returned by the …
9:29 AM Ticket #1024 (Allow users to select a specific job-agent when creating a new job) created by Nicklas Nordborg
When job agents are used to execute jobs there is limited way to …
9:12 AM Ticket #1022 (Add support for using regular expressions in queries) updated by Nicklas Nordborg
Description changed
9:12 AM Ticket #1023 (Add support for using regular expressions when filtering lists) created by Nicklas Nordborg
This depends on #1022. We could use '~' and '!~' as the operator prefixes.
9:09 AM Ticket #1022 (Add support for using regular expressions in queries) created by Nicklas Nordborg
This is not in the SQL standard, but both Postgres and MySQL have an …
9:05 AM Changeset [4273] by Martin Svensson
Fixes #1021 Unclosed DbControl
9:05 AM Ticket #1021 (Unclosed DbControler) closed by Martin Svensson
fixed: (In [4273]) Fixes #1021 Unclosed DbControl
8:37 AM Ticket #1021 (Unclosed DbControler) updated by Martin Svensson
Owner, Status changed
8:36 AM Ticket #1021 (Unclosed DbControler) created by Martin Svensson
[…]
8:30 AM Changeset [4272] by Nicklas Nordborg
Fixes #1018: Make it possible to filter on null at the same time as a …
8:30 AM Ticket #1018 (Make it possible to filter on null at the same time as a real value) closed by Nicklas Nordborg
fixed: (In [4272]) Fixes #1018: Make it possible to filter on null at the …
8:05 AM Ticket #1018 (Make it possible to filter on null at the same time as a real value) reopened by Nicklas Nordborg
Hmm... something strange has happened... The code that was checked in …
7:52 AM Ticket #1014 (Issues listing data after removing items) updated by Nicklas Nordborg
Summary changed
This can happen when a user has chosen to display/sort on/filter on a …

May 7, 2008:

11:16 PM Ticket #1019 (Reporter list manager - Create reporter list using combinations of ...) updated by Nicklas Nordborg
Hmmm... there is a forth operation as well, but I don't think this …
11:07 PM Ticket #1020 (A reporter list should hold the number of reporters in it) created by Nicklas Nordborg
I think this would be useful information once #1019 is implemented and …
11:04 PM Ticket #1019 (Reporter list manager - Create reporter list using combinations of ...) updated by Nicklas Nordborg
I find the description in this ticket a bit confusing... Doesn't the …
4:44 PM Ticket #1017 (Make MedianRatioNormalization to normalize 1-channel data) updated by Johan Vallon-Christersson
Summary changed
4:41 PM Ticket #1019 (Reporter list manager - Create reporter list using combinations of ...) created by Johan Vallon-Christersson
Added functionality to manage reporter lists and create new reporter …
4:14 PM Ticket #1008 (Error in API doc for class `SpotExtraValueBatcher<I>`) closed by Martin Svensson
fixed: (In [4271]) Fixes #1008 Updated documentation
4:14 PM Changeset [4271] by Martin Svensson
Fixes #1008 Updated documentation
3:01 PM Changeset [4270] by Nicklas Nordborg
Fixes #1018: Make it possible to filter on null at the same time as a …
3:01 PM Ticket #1018 (Make it possible to filter on null at the same time as a real value) closed by Nicklas Nordborg
fixed: (In [4270]) Fixes #1018: Make it possible to filter on null at the …
1:39 PM Ticket #1018 (Make it possible to filter on null at the same time as a real value) updated by Nicklas Nordborg
Status changed
1:38 PM Ticket #1018 (Make it possible to filter on null at the same time as a real value) created by Nicklas Nordborg
In the web client it is possible to filter on two values by giving a …
9:27 AM Ticket #1017 (Make MedianRatioNormalization to normalize 1-channel data) updated by Jari Häkkinen
Status changed
9:26 AM Ticket #1017 (Make MedianRatioNormalization to normalize 1-channel data) created by Jari Häkkinen
The summary says it all. Remember to change the information on core …

May 6, 2008:

7:30 PM Ticket #1016 (Filter table using a reporter list) created by Johan Vallon-Christersson
For a table that lists reporters/reporter info it would be useful to …
7:11 PM Ticket #1015 (Add reporter list from tables that list reporters/reporter info.) created by Johan Vallon-Christersson
Currently, the functionality to create reporter lists is only …
1:51 PM Ticket #954 (Array slides – Creating array slides using import plugin) closed by Nicklas Nordborg
wontfix: This will be probably be implemented as a more generic import plug-in …
10:07 AM Ticket #1013 (Sharing of items to other users and/or groups fails) updated by Nicklas Nordborg
A workaround is to assign the user to a role that has …
9:23 AM Changeset [4269] by Nicklas Nordborg
Fixes #1013: Sharing of items to other users and/or groups fails This …
9:23 AM Ticket #1013 (Sharing of items to other users and/or groups fails) closed by Nicklas Nordborg
fixed: (In [4269]) Fixes #1013: Sharing of items to other users and/or groups …
9:08 AM Ticket #1014 (Issues listing data after removing items) created by Jari Häkkinen
In some cases listing of spot data fails for me. After deleting …
8:56 AM Ticket #1013 (Sharing of items to other users and/or groups fails) updated by Nicklas Nordborg
Priority, Status, Owner, Milestone changed
8:47 AM Ticket #1013 (Sharing of items to other users and/or groups fails) created by Jari Häkkinen
A user with role 'User' cannot share items to other users nor groups. …
8:41 AM Ticket #1012 (Information on 'read' access to users needs clarification) created by Jari Häkkinen
In …
8:25 AM Changeset [4268] by Jari Häkkinen
Minor change in web client doc.

May 5, 2008:

10:05 PM Changeset [4267] by Nicklas Nordborg
References #974. Revert accidental renaming of method in [4256]
10:05 PM Ticket #974 (Link from raw bioassay to job that imported the raw data) updated by Nicklas Nordborg
(In [4267]) References #974. Revert accidental renaming of method in [4256]
3:02 PM Ticket #964 (Support preset filter list with null/not null values) closed by Nicklas Nordborg
duplicate: Replaced by #1011
3:02 PM Ticket #962 (Filtering the list – ”not equal to” operator for selection list options) closed by Nicklas Nordborg
duplicate: Replaced by #1011
3:01 PM Ticket #1011 (Select multiple alternatives for a filter with a specified list of options) created by Nicklas Nordborg
This ticket replaces #962 and #964. A property of an item that can …
1:24 PM Changeset [4266] by Nicklas Nordborg
Fixes #943: Base1PluginExecuter should import reporterlists
1:24 PM Ticket #943 (Base1PluginExecuter should import reporterlists) closed by Nicklas Nordborg
fixed: (In [4266]) Fixes #943: Base1PluginExecuter should import reporterlists
10:46 AM Ticket #943 (Base1PluginExecuter should import reporterlists) updated by Nicklas Nordborg
Status changed
10:46 AM Ticket #943 (Base1PluginExecuter should import reporterlists) updated by Nicklas Nordborg
Owner, Status changed
9:37 AM Ticket #1001 (Plug-ins that use the 'execute immediately' option can't be aborted) closed by Nicklas Nordborg
fixed: (In [4265]) Fixes #1001: Plug-ins that use the 'execute immediately' …
9:37 AM Changeset [4265] by Nicklas Nordborg
Fixes #1001: Plug-ins that use the 'execute immediately' option can't …
9:36 AM Ticket #1010 (Display progress reporter for plug-ins that are executing with the ...) created by Nicklas Nordborg
In the current implementation a window with the message `Do not close …
8:44 AM Ticket #1001 (Plug-ins that use the 'execute immediately' option can't be aborted) updated by Nicklas Nordborg
Status, Owner changed

Apr 30, 2008:

12:40 PM Ticket #436 (Create extension system for the web application) updated by Nicklas Nordborg
(In [4264]) References #436: Create extension system for the web …
12:40 PM Changeset [4264] by Nicklas Nordborg
References #436: Create extension system for the web application …
12:39 PM Changeset [4263] by Nicklas Nordborg
References #933: Create extension points for some selected places in …
12:39 PM Ticket #933 (Create extension points for some selected places in the web client) updated by Nicklas Nordborg
(In [4263]) References #933: Create extension points for some selected …
9:54 AM Ticket #933 (Create extension points for some selected places in the web client) updated by Nicklas Nordborg
(In [4262]) References #933: Create extension points for some selected …
9:54 AM Changeset [4262] by Nicklas Nordborg
References #933: Create extension points for some selected places in …
9:07 AM Ticket #933 (Create extension points for some selected places in the web client) updated by Nicklas Nordborg
Owner, Status changed
Hmm... not much response on this one. I'll close this ticket after …

Apr 29, 2008:

1:58 PM Ticket #1009 (Link from array design to job that imported the features) closed by Nicklas Nordborg
fixed: (In [4261]) Fixes #1009: Link from array design to job that imported …
1:58 PM Changeset [4261] by Nicklas Nordborg
Fixes #1009: Link from array design to job that imported the features
1:58 PM Changeset [4260] by Nicklas Nordborg
References #974. Don't display import information for file-only data sets
1:58 PM Ticket #974 (Link from raw bioassay to job that imported the raw data) updated by Nicklas Nordborg
(In [4260]) References #974. Don't display import information for …
1:47 PM Changeset [4259] by Nicklas Nordborg
References #974. Changed label on 'import date' column
1:47 PM Ticket #974 (Link from raw bioassay to job that imported the raw data) updated by Nicklas Nordborg
(In [4259]) References #974. Changed label on 'import date' column
1:42 PM Changeset [4258] by Nicklas Nordborg
Fixes #974: Link from raw bioassay to job that imported the raw data
1:42 PM Ticket #974 (Link from raw bioassay to job that imported the raw data) closed by Nicklas Nordborg
fixed: (In [4258]) Fixes #974: Link from raw bioassay to job that imported …
12:59 PM Changeset [4257] by Nicklas Nordborg
References #1009: Link from array design to job that imported the …
12:59 PM Ticket #1009 (Link from array design to job that imported the features) updated by Nicklas Nordborg
(In [4257]) References #1009: Link from array design to job that …
11:39 AM Ticket #1009 (Link from array design to job that imported the features) updated by Nicklas Nordborg
Status changed
11:39 AM Changeset [4256] by Nicklas Nordborg
References #974: Link from raw bioassay to job that imported the raw …
11:39 AM Ticket #974 (Link from raw bioassay to job that imported the raw data) updated by Nicklas Nordborg
(In [4256]) References #974: Link from raw bioassay to job that …
8:26 AM Ticket #1009 (Link from array design to job that imported the features) created by Nicklas Nordborg
This is the same thing for array designs as #974 is for raw bioassays
8:08 AM Ticket #974 (Link from raw bioassay to job that imported the raw data) updated by Nicklas Nordborg
Status, Owner, Summary changed
8:06 AM Ticket #1007 (Add reference to the Illumina plugin in BASE doc Appendix B) updated by Nicklas Nordborg
There is already a link to the BASE plug-ins site in the start of that …

Apr 28, 2008:

11:16 PM Ticket #1008 (Error in API doc for class `SpotExtraValueBatcher<I>`) created by Jari Häkkinen
In javadoc section for Class SpotExtraValueBatcher<I> there should …
8:29 PM Ticket #1007 (Add reference to the Illumina plugin in BASE doc Appendix B) created by Jari Häkkinen
The listing of core plugins should reference to baseplugins.thep.lu.se …
3:44 PM Changeset [4255] by Jari Häkkinen
Typo.
3:00 PM Changeset [4254] by Nicklas Nordborg
Fixes #972: Assign job to experiment when the job is created The …
3:00 PM Ticket #972 (Assign job to experiment when the job is created) closed by Nicklas Nordborg
fixed: (In [4254]) Fixes #972: Assign job to experiment when the job is …
2:05 PM Ticket #972 (Assign job to experiment when the job is created) updated by Nicklas Nordborg
Summary, Status, Owner changed
12:25 PM Changeset [4253] by Nicklas Nordborg
Undo changes made in [4250] to this file. The code was related to …
12:19 PM Ticket #1006 (Make it possible to search for missing annotations) updated by Nicklas Nordborg
Summary changed
12:19 PM Ticket #1006 (Make it possible to search for missing annotations) closed by Nicklas Nordborg
fixed: (In [4252]) Fixes #1006: Make it possible to search for missing annotations
12:19 PM Changeset [4252] by Nicklas Nordborg
Fixes #1006: Make it possible to search for missing annotations
11:47 AM Ticket #1006 (Make it possible to search for missing annotations) updated by Nicklas Nordborg
Owner, Status changed
10:55 AM Ticket #1006 (Make it possible to search for missing annotations) updated by Nicklas Nordborg
Summary changed
10:54 AM Ticket #1006 (Make it possible to search for missing annotations) created by Nicklas Nordborg
There is an issue that manifests itself when filtering lists of items …
10:48 AM Changeset [4251] by Nicklas Nordborg
Fixes #965: Filtering the list – selection list vs. input box for …
10:48 AM Ticket #965 (Filtering the list – selection list vs. input box for enumeration type ...) closed by Nicklas Nordborg
fixed: (In [4251]) Fixes #965: Filtering the list ?\226?\128?\147 selection …

Apr 25, 2008:

3:41 PM Ticket #965 (Filtering the list – selection list vs. input box for enumeration type ...) updated by Nicklas Nordborg
(In [4250]) References #965: Filtering the list ?\226?\128?\147 …
3:41 PM Changeset [4250] by Nicklas Nordborg
References #965: Filtering the list – selection list vs. input box for …

Apr 24, 2008:

2:00 PM Ticket #965 (Filtering the list – selection list vs. input box for enumeration type ...) updated by Nicklas Nordborg
Status, Owner changed
1:30 PM Changeset [4249] by Nicklas Nordborg
Fixes #1005: Test programs should print out server information just …
1:30 PM Ticket #1005 (Test programs should print out server information just like the initdb ...) closed by Nicklas Nordborg
fixed: (In [4249]) Fixes #1005: Test programs should print out server …
1:08 PM Changeset [4248] by Nicklas Nordborg
Fixes #1004: Upgrade Postgres JDBC driver to 8.3.603
1:08 PM Ticket #1004 (Upgrade Postgres JDBC driver to 8.3.603) closed by Nicklas Nordborg
fixed: (In [4248]) Fixes #1004: Upgrade Postgres JDBC driver to 8.3.603
1:07 PM Ticket #1005 (Test programs should print out server information just like the initdb ...) created by Nicklas Nordborg
This is very useful to know and make sure that the test programs run …
12:55 PM Ticket #1004 (Upgrade Postgres JDBC driver to 8.3.603) updated by Nicklas Nordborg
Status, Owner changed
12:55 PM Changeset [4247] by Nicklas Nordborg
Fixes #1003: Illumina raw data importer – Enhance feature mismatch …
12:55 PM Ticket #1003 (Illumina raw data importer – Enhance feature mismatch error handling) closed by Nicklas Nordborg
fixed: (In [4247]) Fixes #1003: Illumina raw data importer ?\226?\128?\147 …
12:11 PM Ticket #1004 (Upgrade Postgres JDBC driver to 8.3.603) created by Nicklas Nordborg
We currently have 8.2.506. The documentation on their web page …
11:39 AM Ticket #1003 (Illumina raw data importer – Enhance feature mismatch error handling) updated by Nicklas Nordborg
Status changed
11:39 AM Changeset [4246] by Nicklas Nordborg
Fixes #968: Raw data importer – Enhance feature mismatch error handling
11:39 AM Ticket #968 (Raw data importer – Enhance feature mismatch error handling) closed by Nicklas Nordborg
fixed: (In [4246]) Fixes #968: Raw data importer ?\226?\128?\147 Enhance …
10:48 AM Ticket #1003 (Illumina raw data importer – Enhance feature mismatch error handling) created by Nicklas Nordborg
Do the same things with this importer as for the flat file raw data …
8:03 AM Ticket #968 (Raw data importer – Enhance feature mismatch error handling) updated by Nicklas Nordborg
Owner, Status changed
8:00 AM Changeset [4245] by Nicklas Nordborg
Fixes #1002: Possible PermissionDeniedException when listing …
8:00 AM Ticket #1002 (Possible PermissionDeniedException when listing rawbioassay through ...) closed by Nicklas Nordborg
fixed: (In [4245]) Fixes #1002: Possible PermissionDeniedException when …
7:54 AM Ticket #1002 (Possible PermissionDeniedException when listing rawbioassay through ...) updated by Nicklas Nordborg
Status changed
The problem is the RawBioAssay.toTransferable() method, which just …
7:50 AM Ticket #965 (Filtering the list – selection list vs. input box for enumeration type ...) updated by Nicklas Nordborg
Milestone changed
7:48 AM Ticket #974 (Link from raw bioassay to job that imported the raw data) updated by Nicklas Nordborg
Milestone changed
7:48 AM Ticket #972 (Assign job to experiment when the job is created) updated by Nicklas Nordborg
Milestone changed
7:45 AM Ticket #968 (Raw data importer – Enhance feature mismatch error handling) updated by Nicklas Nordborg
Milestone changed
7:44 AM Ticket #1002 (Possible PermissionDeniedException when listing rawbioassay through ...) created by Nicklas Nordborg
This happens if one of the raw bioassays the user has access to is …

Apr 23, 2008:

3:04 PM Changeset [4244] by Nicklas Nordborg
Fixes #993: Paste multiple barcodes in the Multiple slides wizard
3:04 PM Ticket #993 (Paste multiple barcodes in the Multiple slides wizard) closed by Nicklas Nordborg
fixed: (In [4244]) Fixes #993: Paste multiple barcodes in the Multiple slides …
1:55 PM Ticket #993 (Paste multiple barcodes in the Multiple slides wizard) updated by Nicklas Nordborg
Status, Owner changed
1:51 PM Changeset [4243] by Nicklas Nordborg
Fixes #920: Add support for aborting queries using a StatlessSession
1:51 PM Ticket #920 (Add support for aborting queries using a StatlessSession) closed by Nicklas Nordborg
fixed: (In [4243]) Fixes #920: Add support for aborting queries using a …
1:50 PM Ticket #1001 (Plug-ins that use the 'execute immediately' option can't be aborted) created by Nicklas Nordborg
This is true for all plug-ins even those that implements the …
1:44 PM Changeset [4242] by Nicklas Nordborg
Fixes #1000: SimpleExport count items twice
1:44 PM Ticket #1000 (SimpleExport count items twice) closed by Nicklas Nordborg
fixed: (In [4242]) Fixes #1000: SimpleExport count items twice
1:40 PM Ticket #1000 (SimpleExport count items twice) created by Nicklas Nordborg
The SimpleExport is the plug-in that is used for all table-like …
9:38 AM Ticket #920 (Add support for aborting queries using a StatlessSession) updated by Nicklas Nordborg
Status, Milestone, Owner changed
The StatlessSessionImpl has public methods that we can use to cancel …

Apr 22, 2008:

2:07 PM Changeset [4241] by Nicklas Nordborg
Fixes #994: Create GAL export plug-in for array designs
2:07 PM Ticket #994 (Create GAL export plug-in for array designs) closed by Nicklas Nordborg
fixed: (In [4241]) Fixes #994: Create GAL export plug-in for array designs
2:06 PM Changeset [4240] by Nicklas Nordborg
Fixes #999: PrintMapImporter should import feature diameter from TAM …
2:06 PM Ticket #999 (PrintMapImporter should import feature diameter from TAM and MWBR files) closed by Nicklas Nordborg
fixed: (In [4240]) Fixes #999: PrintMapImporter should import feature …
11:49 AM Ticket #999 (PrintMapImporter should import feature diameter from TAM and MWBR files) updated by Nicklas Nordborg
Status, Owner changed
11:48 AM Changeset [4239] by Nicklas Nordborg
References #994: Create GAL export plug-in for array designs Added …
11:48 AM Ticket #994 (Create GAL export plug-in for array designs) updated by Nicklas Nordborg
(In [4239]) References #994: Create GAL export plug-in for array …
11:47 AM Ticket #994 (Create GAL export plug-in for array designs) updated by Nicklas Nordborg
Summary, Type changed
11:36 AM Ticket #999 (PrintMapImporter should import feature diameter from TAM and MWBR files) created by Nicklas Nordborg
We need a new column in the ArrayDesignBlock table for this. The …

Apr 21, 2008:

10:50 AM Ticket #994 (Create GAL export plug-in for array designs) updated by Nicklas Nordborg
Status, Owner changed
10:50 AM Ticket #989 (Add support for using extension classes in custom JSP pages) closed by Nicklas Nordborg
fixed
10:50 AM Ticket #988 (Add support for servlets in extensions) closed by Nicklas Nordborg
fixed
10:49 AM Ticket #436 (Create extension system for the web application) closed by Nicklas Nordborg
fixed
10:00 AM Changeset [4238] by Nicklas Nordborg
Fixes #998: Decimal numbers may be incorrectly rounded
10:00 AM Ticket #998 (Decimal numbers may be incorrectly rounded) closed by Nicklas Nordborg
fixed: (In [4238]) Fixes #998: Decimal numbers may be incorrectly rounded
9:27 AM Ticket #998 (Decimal numbers may be incorrectly rounded) updated by Nicklas Nordborg
Summary, Milestone, Priority changed
I don't think this problem is related to the ordering. It is more …

Apr 19, 2008:

3:27 PM Bioassay_Spot_Data_Sort_ch1.jpg attached to Ticket #998 by Johan Vallon-Christersson
3:26 PM Ticket #998 (Decimal numbers may be incorrectly rounded) created by Johan Vallon-Christersson
Numbers are not sorted correctly. Bioassay, Spots data, Sort Ch1. …

Apr 18, 2008:

2:41 PM Ticket #997 (Read and update installation/upgrade instructions) created by Nicklas Nordborg
The installation and upgrade instructions are becoming a bit old. We …
2:36 PM Ticket #99 (java.lang.NoSuchMethodError: getHibernateLazyInitializer) updated by Nicklas Nordborg
It seems like this issue was fixed in Hibernate 3.2.3. BASE 2.4 …
2:09 PM Ticket #436 (Create extension system for the web application) updated by Nicklas Nordborg
(In [4237]) References #436: Create extension system for the web …
2:08 PM Changeset [4237] by Nicklas Nordborg
References #436: Create extension system for the web application …
1:06 PM Changeset [4236] by Nicklas Nordborg
References #436: Create extension system for the web application …
1:06 PM Ticket #436 (Create extension system for the web application) updated by Nicklas Nordborg
(In [4236]) References #436: Create extension system for the web …
11:51 AM Changeset [4235] by Nicklas Nordborg
Fixes #996: MEV can't open data files that has a missing value in the …
11:51 AM Ticket #996 (MEV can't open data files that has a missing value in the last column) closed by Nicklas Nordborg
fixed: (In [4235]) Fixes #996: MEV can't open data files that has a missing …
11:31 AM Ticket #932 (Convert the MeV launcher to an extension) closed by Nicklas Nordborg
fixed: (In [4234]) Fixes #932: Convert the MeV launcher to an extension …
11:31 AM Changeset [4234] by Nicklas Nordborg
Fixes #932: Convert the MeV launcher to an extension MEV-related code …
11:16 AM Ticket #996 (MEV can't open data files that has a missing value in the last column) created by Nicklas Nordborg
The BioAssaySetExporter can export data in MEV format. The export …
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