Core specification
Default data for a new installations
This document contains a list of all items that are automatically installed into a new BASE 2 installation.
ContentsRole keys
Quota
Hardware: To be done (JVC)
8. Software and software types
Software types:
Software: To be done (JVC)
9. File types
One type for each item that can be linked with a file.
This list may change when the "FileAttachable" interface
is developed.
| Mime type | Description | Extension |
|---|---|---|
| text/plain | Text files | txt |
| text/html | Hypertext markup language files | htm |
| text/html | Hypertext markup language files | html |
| image/jpeg | JPEG image | jpg |
| image/jpeg | JPEG image | jpeg |
| image/jpeg | JPEG image | jpe |
| image/gif | GIF image | gif |
| image/png | PNG image | png |
| image/tiff | TIFF image | tiff |
| image/tiff | TIFF image | tif |
| image/rgb | RGB image | rgb |
| image/x-pict | Macintosh PICT format | pict |
| image/x-ms-bmp | Microsoft Windows bitmap | bmp |
| application/postscript | PostScript | ai |
| application/postscript | PostScript | eps |
| application/postscript | PostScript | ps |
| application/pdf | Adobe Acrobat PDF | |
| application/x-latex | LaTeX document | latex |
| application/msword | MS word document | doc |
| application/rtf | Microsoft Rich Text Format | rtf |
| application/octet-stream | PC executable | exe |
| application/x-perl | Perl program | pl |
| application/vnd.ms-powerpoint | PowerPoint (Microsoft) | ppt |
| application/vnd.ms-powerpoint | PowerPoint (Microsoft) | ppz |
| application/vnd.ms-powerpoint | PowerPoint (Microsoft) | pps |
| application/vnd.ms-powerpoint | PowerPoint (Microsoft) | pot |
| application/vnd.ms-excel | Excel spreadsheet (Microsoft) | xls |
| application/vnd.ms-excel | Excel spreadsheet (Microsoft) | xlc |
| application/vnd.ms-excel | Excel spreadsheet (Microsoft) | xll |
| application/vnd.ms-excel | Excel spreadsheet (Microsoft) | xlm |
| application/vnd.ms-excel | Excel spreadsheet (Microsoft) | xlw |
| application/x-compress | Unix compressed file | z |
| application/zip | DOS/PC - Pkzipped archive | zip |
| application/x-compressed | Gzip compressed archive | tgz |
| application/x-gtar | Gzipped archive | gtar |
| application/x-gzip | Gzip compressed file | gz |
Microarray/BASE-specific mime types
| Mime type | Description | Extension |
|---|---|---|
| text/plain | GenePix Results file | gpr |
| text/plain | GenePix Array List file | gal |
| text/plain | Spot file format | spot |
| text/plain | Spotfinder file format | tav |
| text/plain | Affymetrix CEL file | cel |
| text/plain | FASTA formatted file | fasta |
| text/plain | BASEfile formatted file | base |
| text/plain | Biorobotics TAM format | tam |
| text/plain | Molecularware MWBR format | mvbr |
Status: Ok
11. Annotation types
All annotations required for MIAME comatibility should
be defined. This requires that it is possible to
import MGED ontologies.
Status: To be done
12. Plate geometries