@Deprecated public class RawBioAssayService extends AbstractRPCService
RawBioAssay
util
Constructor and Description |
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RawBioAssayService()
Deprecated.
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Modifier and Type | Method and Description |
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org.apache.axiom.om.OMElement |
downloadRawDataByType(java.lang.String ID,
int rawBioAssayId,
java.lang.String dataFileType)
Deprecated.
Returns a rawdata file of a certain type attached to an OMElement.
|
AnnotationInfo[] |
getAnnotations(java.lang.String ID,
int rawBioAssayId,
java.lang.Integer[] annotationTypes,
boolean findInherited)
Deprecated.
Get the annotation values for one or more annotation types.
|
ArrayDesignInfo |
getArrayDesign(java.lang.String ID,
int rawBioAssayId)
Deprecated.
Gets information about the array design used in a rawbioassay.
|
RawBioAssayInfo |
getById(java.lang.String ID,
int itemId)
Deprecated.
Get information about a raw bioassay that you know the ID of.
|
FileSetMemberInfo[] |
getDataFiles(java.lang.String ID,
int rawBioAssayId,
QueryOptions qOpt)
Deprecated.
Returns information objects for each data file that is associated with
a RawBioAssay.
|
DataFileTypeInfo[] |
getDataFileTypes(java.lang.String ID,
int rawBioAssayId,
QueryOptions qOpt)
Deprecated.
Returns information objects for each DataFileType represented in the FileSet
of a RawBioAssay.
|
RawBioAssayInfo[] |
getRawBioAssays(java.lang.String ID,
QueryOptions qOpt)
Deprecated.
Gets an array with info about raw bioassays
available for the active session.
|
java.lang.Boolean |
hasDownloadableData(java.lang.String ID,
int rawBioAssayId)
Deprecated.
Gets if the rawdata files can be downloaded or not.
|
attachFile, getRemoteId, getSessionControl
public RawBioAssayInfo getById(java.lang.String ID, int itemId)
ID
- Id to identify the session.itemId
- The ID of the raw bioassaypublic RawBioAssayInfo[] getRawBioAssays(java.lang.String ID, QueryOptions qOpt)
ID
- Id for the session to use.qOpt
- QueryOptions to put on the querypublic ArrayDesignInfo getArrayDesign(java.lang.String ID, int rawBioAssayId)
ID
- To identify the active session withrawBioAssayId
- ArrayDesign from RawBioAssay with this id.public org.apache.axiom.om.OMElement downloadRawDataByType(java.lang.String ID, int rawBioAssayId, java.lang.String dataFileType)
getDataFiles(String, int, QueryOptions)
and
FileService
to handle the multi-file case.ID
- Used to identify an active session with.rawBioAssayId
- Id of the rawbio assay the file belongs to.dataFileType
- The external ID of the file type.DataFileType
,
getDataFiles(String, int, QueryOptions)
public java.lang.Boolean hasDownloadableData(java.lang.String ID, int rawBioAssayId)
ID
- Used to identify an active session withrawBioAssayId
- Id of the rawbio assay it concernspublic DataFileTypeInfo[] getDataFileTypes(java.lang.String ID, int rawBioAssayId, QueryOptions qOpt)
ID
- Id of the active session.rawBioAssayId
- Id of the rawbioassay it concernsqOpt
- Restrictions and includes to put on the querypublic FileSetMemberInfo[] getDataFiles(java.lang.String ID, int rawBioAssayId, QueryOptions qOpt)
ID
- Id of the active session.rawBioAssayId
- Id of the rawbioassay it concernsqOpt
- Restrictions and includes to put on the querypublic AnnotationInfo[] getAnnotations(java.lang.String ID, int rawBioAssayId, java.lang.Integer[] annotationTypes, boolean findInherited)
ID
- Id of the active session.rawBioAssayId
- Id of the rawbioassay it concernsannotationTypes
- Array with the ID of the annotation typesfindInherited
- TRUE to look among inherited annotations, FALSE to only look
at primary annotations