public static class ExperimentExplorer.AnnotationSummary
extends java.lang.Object
Modifier and Type | Field and Description |
---|---|
private AnnotationType |
annotationType |
private java.util.Map<java.lang.Short,ExperimentExplorer.AnnotationGroup> |
assayGroups |
private ExperimentExplorer |
explorer |
private java.util.Set<ExperimentExplorer.AnnotationGroup> |
groups |
Modifier | Constructor and Description |
---|---|
private |
ExperimentExplorer.AnnotationSummary(ExperimentExplorer explorer,
DbControl dc,
AnnotationType annotationType) |
Modifier and Type | Method and Description |
---|---|
ExperimentExplorer.AnnotationGroup |
getAnnotationGroup(short column)
Get the annotation group for the bioassay with the
give data cube column.
|
java.util.Set<ExperimentExplorer.AnnotationGroup> |
getAnnotationGroups()
Get all annotation groups that was found among the bioassays.
|
AnnotationType |
getAnnotationType()
Get the annotation type this summary is based on.
|
void |
reset()
Reset the collected statistics in all annotation groups.
|
void |
setColorsAuto()
Arranges the colors of the groups in the order they
are returned by the
getAnnotationGroups() set. |
private final ExperimentExplorer explorer
private final java.util.Map<java.lang.Short,ExperimentExplorer.AnnotationGroup> assayGroups
private final java.util.Set<ExperimentExplorer.AnnotationGroup> groups
private final AnnotationType annotationType
private ExperimentExplorer.AnnotationSummary(ExperimentExplorer explorer, DbControl dc, AnnotationType annotationType)
public AnnotationType getAnnotationType()
public ExperimentExplorer.AnnotationGroup getAnnotationGroup(short column)
column
- The data cube column of an bioassaypublic java.util.Set<ExperimentExplorer.AnnotationGroup> getAnnotationGroups()
public void reset()
public void setColorsAuto()
getAnnotationGroups()
set.