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java.lang.Objectnet.sf.basedb.ws.server.AbstractRPCService
net.sf.basedb.ws.server.BioAssaySetService
public class BioAssaySetService
Web service for BioAssaySet BioAssaySet
.
This class provides services to get information and data from BioAssaySet.
Field Summary |
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Fields inherited from class net.sf.basedb.ws.server.AbstractRPCService |
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util |
Constructor Summary | |
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BioAssaySetService()
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Method Summary | |
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org.apache.axiom.om.OMElement |
downloadDataFile(String ID,
int bioAssaySetId,
String dataFileType)
Returns a data file of a certain type attached to an OMElement. |
AnnotationInfo[] |
getAnnotations(String ID,
int bioAssaySetId,
Integer[] annotationTypes,
boolean findInherited)
Get the annotation values for one or more annotation types. |
FileSetMemberInfo[] |
getDataFiles(String ID,
int bioAssaySetId,
QueryOptions qOpt)
Returns information objects for each data file that is associated with a bioassay set. |
DataFileTypeInfo[] |
getDataFileTypes(String ID,
int bioAssaySetId,
QueryOptions qOpt)
Returns information objects for each DataFileType represented in the FileSet of a BioAssaySet. |
Boolean |
hasDownloadableData(String ID,
int bioAssaySetId)
Checks if the files has been attached to bioassay set. |
Methods inherited from class net.sf.basedb.ws.server.AbstractRPCService |
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attachFile, getRemoteId, getSessionControl |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public BioAssaySetService()
Method Detail |
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public org.apache.axiom.om.OMElement downloadDataFile(String ID, int bioAssaySetId, String dataFileType)
getDataFiles(String, int, QueryOptions)
and
FileService
to handle the multi-file case.
ID
- Used to identify an active session with.bioAssaySetId
- Id of the bioassay set the file belongs to.dataFileType
- The external ID of the file type.
DataFileType
public Boolean hasDownloadableData(String ID, int bioAssaySetId)
ID
- Used to identify an active session withbioAssaySetId
- Id of the bioassay set it concerns
public DataFileTypeInfo[] getDataFileTypes(String ID, int bioAssaySetId, QueryOptions qOpt)
ID
- Id of the active session.bioAssaySetId
- Id of the bioassay set it concernsqOpt
- Restrictions and includes to put on the query
public FileSetMemberInfo[] getDataFiles(String ID, int bioAssaySetId, QueryOptions qOpt)
ID
- Id of the active session.bioAssaySetId
- Id of the bioassay set it concernsqOpt
- Restrictions and includes to put on the query
public AnnotationInfo[] getAnnotations(String ID, int bioAssaySetId, Integer[] annotationTypes, boolean findInherited)
ID
- Id of the active session.bioAssaySetId
- Id of the bioassay set it concernsannotationTypes
- Array with the ID of the annotation typesfindInherited
- TRUE to look among inherited annotations, FALSE to only look
at primary annotations
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