3.2.1: 2012-12-13

net.sf.basedb.util.overview.validator
Class BioSourceValidator

java.lang.Object
  extended by net.sf.basedb.util.overview.validator.BasicNodeValidator<I>
      extended by net.sf.basedb.util.overview.validator.NameableNodeValidator<BioSource>
          extended by net.sf.basedb.util.overview.validator.BioSourceValidator
All Implemented Interfaces:
NodeValidator<BioSource>

public class BioSourceValidator
extends NameableNodeValidator<BioSource>

Validator implementation for biosources. Validation rules:

Version:
2.10
Author:
Nicklas
Last modified
$Date: 2011-08-11 11:09:06 +0200 (Thu, 11 Aug 2011) $

Constructor Summary
BioSourceValidator()
           
 
Method Summary
protected  Fix getMissingItemFix(DbControl dc, Node sampleNode)
          Subclasses should override this method if they have a suggessted fix for a missing item problem.
 void postValidate(DbControl dc, OverviewContext context, Node node, Node parentNode)
          Do nothing.
 
Methods inherited from class net.sf.basedb.util.overview.validator.BasicNodeValidator
getDeniedItemFix, postDeniedItem, postMissingItem, postValidateFolder, preDeniedItem, preMissingItem, preValidate
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

BioSourceValidator

public BioSourceValidator()
Method Detail

postValidate

public void postValidate(DbControl dc,
                         OverviewContext context,
                         Node node,
                         Node parentNode)
Description copied from class: BasicNodeValidator
Do nothing. Subclasses should override this method if they need more validation for an existing and accessible item.

Specified by:
postValidate in interface NodeValidator<BioSource>
Overrides:
postValidate in class NameableNodeValidator<BioSource>
Parameters:
dc - A DbControl to use if the validation needs to access the database
context - The current overview context
node - The node object that represents item
parentNode - The parent node that is linked with the item

getMissingItemFix

protected Fix getMissingItemFix(DbControl dc,
                                Node sampleNode)
Description copied from class: BasicNodeValidator
Subclasses should override this method if they have a suggessted fix for a missing item problem. The default implementation does nothing, but the following template may be usable by most subclasses:
                new Fix("Add item to parent", parentNode.getItem())
                

Specified by:
getMissingItemFix in class BasicNodeValidator<BioSource>
Returns:
Suggested fix is to add a biosource to the parent sample.

3.2.1: 2012-12-13